RNA–Protein interactions for RNA: ENST00000384092.1

RNU6-260P-201, Transcript of RNA, U6 small nuclear 260, pseudogene, humanhuman

BASIC

Gene RNU6-260P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-260P-201ENST00000384092 AEBP2Q6ZN18 517 aaPredicted RBP6.92□□□□□ -1.3
RNU6-260P-201ENST00000384092 CHIC1Q5VXU3 224 aa6.43□□□□□ -1.38
RNU6-260P-201ENST00000384092 POTEDQ86YR6 584 aa6.32□□□□□ -1.4
RNU6-260P-201ENST00000384092 SENP3Q9H4L4 574 aaPredicted RBP5.94□□□□□ -1.46
RNU6-260P-201ENST00000384092 PHF23Q9BUL5 403 aaPredicted RBP5.85□□□□□ -1.47
RNU6-260P-201ENST00000384092 FOXD1Q16676 465 aa5.63□□□□□ -1.51
RNU6-260P-201ENST00000384092 MSH5O43196 834 aa5.43□□□□□ -1.54
RNU6-260P-201ENST00000384092 PIAS4Q8N2W9 510 aaPredicted RBP5.11□□□□□ -1.59
RNU6-260P-201ENST00000384092 CACNB1Q02641 598 aaPredicted RBP5.02□□□□□ -1.61
RNU6-260P-201ENST00000384092 PPP6R1Q9UPN7 881 aa4.95□□□□□ -1.62
RNU6-260P-201ENST00000384092 ADRA2BP18089 450 aa4.89□□□□□ -1.63
RNU6-260P-201ENST00000384092 POTEHQ6S545 545 aa4.87□□□□□ -1.63
RNU6-260P-201ENST00000384092 PLPPR3Q6T4P5 718 aa4.68□□□□□ -1.66
RNU6-260P-201ENST00000384092 MAPK8IP2Q13387 824 aaPredicted RBP4.65□□□□□ -1.67
RNU6-260P-201ENST00000384092 DMRT2Q9Y5R5 561 aa4.65□□□□□ -1.67
RNU6-260P-201ENST00000384092 RNF39Q9H2S5 420 aa4.58□□□□□ -1.68
RNU6-260P-201ENST00000384092 C1QBPQ07021 282 aaKnown RBP4.5□□□□□ -1.69
RNU6-260P-201ENST00000384092 DCAF8L1A6NGE4 600 aa4.48□□□□□ -1.69
RNU6-260P-201ENST00000384092 SCAF1Q9H7N4 1312 aaKnown RBP4.46□□□□□ -1.69
RNU6-260P-201ENST00000384092 PLSCR2Q9NRY7 297 aa4.33□□□□□ -1.72
RNU6-260P-201ENST00000384092 HOXD11P31277 338 aaPredicted RBP4.32□□□□□ -1.72
RNU6-260P-201ENST00000384092 SP7Q8TDD2 431 aaPredicted RBP4.25□□□□□ -1.73
RNU6-260P-201ENST00000384092 DNAJC5BQ9UF47 199 aa4.25□□□□□ -1.73
RNU6-260P-201ENST00000384092 DSG3P32926 999 aa4.15□□□□□ -1.75
RNU6-260P-201ENST00000384092 RNF216Q9NWF9 866 aaPredicted RBP4.15□□□□□ -1.75
RNU6-260P-201ENST00000384092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.11□□□□□ -1.75
RNU6-260P-201ENST00000384092 CNKSR2Q8WXI2 1034 aa4.08□□□□□ -1.76
RNU6-260P-201ENST00000384092 CAPN15O75808 1086 aa4.06□□□□□ -1.76
RNU6-260P-201ENST00000384092 PPP4R3CPQ6ZMV5 832 aa4.06□□□□□ -1.76
RNU6-260P-201ENST00000384092 SPINK5Q9NQ38 1064 aaPredicted RBP4.06□□□□□ -1.76
RNU6-260P-201ENST00000384092 CHRDL2Q6WN34 429 aa4.05□□□□□ -1.76
RNU6-260P-201ENST00000384092 LHX8Q68G74 356 aa3.97□□□□□ -1.77
RNU6-260P-201ENST00000384092 U3KPZ7 1027 aaPredicted RBP3.96□□□□□ -1.78
RNU6-260P-201ENST00000384092 HAX1O00165 279 aa3.94□□□□□ -1.78
RNU6-260P-201ENST00000384092 RBM42Q9BTD8 480 aaKnown RBP3.94□□□□□ -1.78
RNU6-260P-201ENST00000384092 ABCB7O75027 752 aa3.91□□□□□ -1.78
RNU6-260P-201ENST00000384092 PCDH10Q9P2E7 1040 aa3.9□□□□□ -1.79
RNU6-260P-201ENST00000384092 TRHP20396 242 aaPredicted RBP3.89□□□□□ -1.79
RNU6-260P-201ENST00000384092 EVX2Q03828 476 aa3.88□□□□□ -1.79
RNU6-260P-201ENST00000384092 PIP4P2Q8N4L2 257 aa3.86□□□□□ -1.79
RNU6-260P-201ENST00000384092 ZNF219Q9P2Y4 722 aaPredicted RBP3.83□□□□□ -1.8
RNU6-260P-201ENST00000384092 POTEMA6NI47 508 aa3.78□□□□□ -1.8
RNU6-260P-201ENST00000384092 FXR2P51116 673 aaKnown RBP eCLIP3.78□□□□□ -1.8
RNU6-260P-201ENST00000384092 AKT1S1Q96B36 256 aa3.78□□□□□ -1.8
RNU6-260P-201ENST00000384092 APLP2Q06481 763 aa3.77□□□□□ -1.81
RNU6-260P-201ENST00000384092 NCBP3Q53F19 620 aaKnown RBP3.75□□□□□ -1.81
RNU6-260P-201ENST00000384092 REM2Q8IYK8 340 aaPredicted RBP3.75□□□□□ -1.81
RNU6-260P-201ENST00000384092 GABBR2O75899 941 aa3.74□□□□□ -1.81
RNU6-260P-201ENST00000384092 POTEGQ6S5H5 508 aa3.73□□□□□ -1.81
RNU6-260P-201ENST00000384092 POLA2Q14181 598 aa3.71□□□□□ -1.82
RNU6-260P-201ENST00000384092 NPM3O75607 178 aaKnown RBP3.7□□□□□ -1.82
RNU6-260P-201ENST00000384092 PITPNM1O00562 1244 aa3.69□□□□□ -1.82
RNU6-260P-201ENST00000384092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.68□□□□□ -1.82
RNU6-260P-201ENST00000384092 SLC4A2P04920 1241 aa3.68□□□□□ -1.82
RNU6-260P-201ENST00000384092 HNRNPUL2Q1KMD3 747 aaKnown RBP3.68□□□□□ -1.82
RNU6-260P-201ENST00000384092 C19orf67A6NJJ6 358 aa3.67□□□□□ -1.82
RNU6-260P-201ENST00000384092 POTEIP0CG38 1075 aa3.66□□□□□ -1.82
RNU6-260P-201ENST00000384092 SAMD1Q6SPF0 538 aaPredicted RBP3.64□□□□□ -1.83
RNU6-260P-201ENST00000384092 PRKAR2AP13861 404 aaKnown RBP3.61□□□□□ -1.83
RNU6-260P-201ENST00000384092 OTUD5Q96G74 571 aa3.61□□□□□ -1.83
RNU6-260P-201ENST00000384092 POTEB2H3BUK9 544 aa3.54□□□□□ -1.84
RNU6-260P-201ENST00000384092 CLCN6P51797 869 aa3.54□□□□□ -1.84
RNU6-260P-201ENST00000384092 OSCARQ8IYS5 282 aa3.54□□□□□ -1.84
RNU6-260P-201ENST00000384092 DCBLD2Q96PD2 775 aa3.53□□□□□ -1.84
RNU6-260P-201ENST00000384092 ZBTB12Q9Y330 459 aaPredicted RBP3.53□□□□□ -1.84
RNU6-260P-201ENST00000384092 CLEC11AQ9Y240 323 aa3.5□□□□□ -1.85
RNU6-260P-201ENST00000384092 LCE2DQ5TA82 110 aaPredicted RBP3.48□□□□□ -1.85
RNU6-260P-201ENST00000384092 CHADLQ6NUI6 762 aa3.48□□□□□ -1.85
RNU6-260P-201ENST00000384092 FAM163AQ96GL9 167 aaPredicted RBP3.48□□□□□ -1.85
RNU6-260P-201ENST00000384092 SPDYE1Q8NFV5 336 aaPredicted RBP3.46□□□□□ -1.86
RNU6-260P-201ENST00000384092 CD44P16070 742 aaKnown RBP3.45□□□□□ -1.86
RNU6-260P-201ENST00000384092 CDAN1Q8IWY9 1227 aa3.45□□□□□ -1.86
RNU6-260P-201ENST00000384092 MMRN1Q13201 1228 aa3.43□□□□□ -1.86
RNU6-260P-201ENST00000384092 SPDYE2BA6NHP3 402 aa3.42□□□□□ -1.86
RNU6-260P-201ENST00000384092 SPDYE6P0CI01 402 aa3.42□□□□□ -1.86
RNU6-260P-201ENST00000384092 SPDYE2Q495Y8 402 aa3.42□□□□□ -1.86
RNU6-260P-201ENST00000384092 MYCNP04198 464 aaPredicted RBP3.41□□□□□ -1.86
RNU6-260P-201ENST00000384092 POTEJP0CG39 1038 aa3.41□□□□□ -1.86
RNU6-260P-201ENST00000384092 MAMSTRQ6ZN01 415 aa3.41□□□□□ -1.86
RNU6-260P-201ENST00000384092 ATF5Q9Y2D1 282 aaPredicted RBP3.41□□□□□ -1.86
RNU6-260P-201ENST00000384092 FARP1Q9Y4F1 1045 aaPredicted RBP3.39□□□□□ -1.87
RNU6-260P-201ENST00000384092 GALR2O43603 387 aaPredicted RBP3.38□□□□□ -1.87
RNU6-260P-201ENST00000384092 PRR29P0C7W0 189 aa3.38□□□□□ -1.87
RNU6-260P-201ENST00000384092 PELP1Q8IZL8 1130 aaKnown RBP3.38□□□□□ -1.87
RNU6-260P-201ENST00000384092 ZNF579Q8NAF0 562 aaKnown RBP3.37□□□□□ -1.87
RNU6-260P-201ENST00000384092 SPNS2Q8IVW8 549 aa3.36□□□□□ -1.87
RNU6-260P-201ENST00000384092 ZRANB1Q9UGI0 708 aa3.35□□□□□ -1.87
RNU6-260P-201ENST00000384092 C7P10643 843 aa3.33□□□□□ -1.88
RNU6-260P-201ENST00000384092 ZNF692Q9BU19 519 aaPredicted RBP3.32□□□□□ -1.88
RNU6-260P-201ENST00000384092 SCUBE2Q9NQ36 999 aa3.32□□□□□ -1.88
RNU6-260P-201ENST00000384092 METRNQ9UJH8 293 aa3.31□□□□□ -1.88
RNU6-260P-201ENST00000384092 SSUH2Q9Y2M2 353 aa3.31□□□□□ -1.88
RNU6-260P-201ENST00000384092 SLC39A7Q92504 469 aa3.3□□□□□ -1.88
RNU6-260P-201ENST00000384092 ASTLQ6HA08 431 aaPredicted RBP3.28□□□□□ -1.88
RNU6-260P-201ENST00000384092 ATMINO43313 823 aaPredicted RBP3.27□□□□□ -1.89
RNU6-260P-201ENST00000384092 FBLN2P98095 1184 aa3.27□□□□□ -1.89
RNU6-260P-201ENST00000384092 ST18O60284 1047 aa3.26□□□□□ -1.89
RNU6-260P-201ENST00000384092 PABPN1Q86U42 306 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU6-260P-201ENST00000384092 PHF12Q96QT6 1004 aa3.25□□□□□ -1.89
RNU6-260P-201ENST00000384092 POTEFA5A3E0 1075 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms