RNA–Protein interactions for RNA: ENST00000383931.1

RNU6-1039P-201, Transcript of RNA, U6 small nuclear 1039, pseudogene, humanhuman

BASIC

Gene RNU6-1039P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1039P-201ENST00000383931 AEBP2Q6ZN18 517 aaPredicted RBP7.3□□□□□ -1.24
RNU6-1039P-201ENST00000383931 CHIC1Q5VXU3 224 aa6.8□□□□□ -1.32
RNU6-1039P-201ENST00000383931 POTEDQ86YR6 584 aa6.38□□□□□ -1.39
RNU6-1039P-201ENST00000383931 SENP3Q9H4L4 574 aaPredicted RBP6.29□□□□□ -1.4
RNU6-1039P-201ENST00000383931 PHF23Q9BUL5 403 aaPredicted RBP6.16□□□□□ -1.42
RNU6-1039P-201ENST00000383931 FOXD1Q16676 465 aa5.93□□□□□ -1.46
RNU6-1039P-201ENST00000383931 MSH5O43196 834 aa5.72□□□□□ -1.49
RNU6-1039P-201ENST00000383931 PIAS4Q8N2W9 510 aaPredicted RBP5.43□□□□□ -1.54
RNU6-1039P-201ENST00000383931 CACNB1Q02641 598 aaPredicted RBP5.21□□□□□ -1.58
RNU6-1039P-201ENST00000383931 PPP6R1Q9UPN7 881 aa5.2□□□□□ -1.58
RNU6-1039P-201ENST00000383931 ADRA2BP18089 450 aa5.15□□□□□ -1.59
RNU6-1039P-201ENST00000383931 PLPPR3Q6T4P5 718 aa4.96□□□□□ -1.62
RNU6-1039P-201ENST00000383931 POTEHQ6S545 545 aa4.92□□□□□ -1.62
RNU6-1039P-201ENST00000383931 DMRT2Q9Y5R5 561 aa4.91□□□□□ -1.62
RNU6-1039P-201ENST00000383931 MAPK8IP2Q13387 824 aaPredicted RBP4.88□□□□□ -1.63
RNU6-1039P-201ENST00000383931 RNF39Q9H2S5 420 aa4.84□□□□□ -1.63
RNU6-1039P-201ENST00000383931 DCAF8L1A6NGE4 600 aa4.76□□□□□ -1.65
RNU6-1039P-201ENST00000383931 C1QBPQ07021 282 aaKnown RBP4.74□□□□□ -1.65
RNU6-1039P-201ENST00000383931 SCAF1Q9H7N4 1312 aaKnown RBP4.71□□□□□ -1.66
RNU6-1039P-201ENST00000383931 HOXD11P31277 338 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1039P-201ENST00000383931 DNAJC5BQ9UF47 199 aa4.48□□□□□ -1.69
RNU6-1039P-201ENST00000383931 SP7Q8TDD2 431 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1039P-201ENST00000383931 RNF216Q9NWF9 866 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1039P-201ENST00000383931 DSG3P32926 999 aa4.38□□□□□ -1.71
RNU6-1039P-201ENST00000383931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU6-1039P-201ENST00000383931 CNKSR2Q8WXI2 1034 aa4.31□□□□□ -1.72
RNU6-1039P-201ENST00000383931 CAPN15O75808 1086 aa4.3□□□□□ -1.72
RNU6-1039P-201ENST00000383931 CHRDL2Q6WN34 429 aa4.28□□□□□ -1.72
RNU6-1039P-201ENST00000383931 PPP4R3CPQ6ZMV5 832 aa4.28□□□□□ -1.72
RNU6-1039P-201ENST00000383931 SPINK5Q9NQ38 1064 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1039P-201ENST00000383931 PLSCR2Q9NRY7 297 aa4.26□□□□□ -1.73
RNU6-1039P-201ENST00000383931 U3KPZ7 1027 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1039P-201ENST00000383931 RBM42Q9BTD8 480 aaKnown RBP4.18□□□□□ -1.74
RNU6-1039P-201ENST00000383931 ABCB7O75027 752 aa4.16□□□□□ -1.74
RNU6-1039P-201ENST00000383931 HAX1O00165 279 aa4.15□□□□□ -1.75
RNU6-1039P-201ENST00000383931 TRHP20396 242 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1039P-201ENST00000383931 LHX8Q68G74 356 aa4.11□□□□□ -1.75
RNU6-1039P-201ENST00000383931 ZNF219Q9P2Y4 722 aaPredicted RBP4.09□□□□□ -1.75
RNU6-1039P-201ENST00000383931 PIP4P2Q8N4L2 257 aa4.08□□□□□ -1.76
RNU6-1039P-201ENST00000383931 EVX2Q03828 476 aa4.06□□□□□ -1.76
RNU6-1039P-201ENST00000383931 APLP2Q06481 763 aa4.02□□□□□ -1.77
RNU6-1039P-201ENST00000383931 AKT1S1Q96B36 256 aa3.99□□□□□ -1.77
RNU6-1039P-201ENST00000383931 FXR2P51116 673 aaKnown RBP eCLIP3.98□□□□□ -1.77
RNU6-1039P-201ENST00000383931 NCBP3Q53F19 620 aaKnown RBP3.98□□□□□ -1.77
RNU6-1039P-201ENST00000383931 REM2Q8IYK8 340 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1039P-201ENST00000383931 NPM3O75607 178 aaKnown RBP3.93□□□□□ -1.78
RNU6-1039P-201ENST00000383931 GABBR2O75899 941 aa3.93□□□□□ -1.78
RNU6-1039P-201ENST00000383931 PITPNM1O00562 1244 aa3.92□□□□□ -1.78
RNU6-1039P-201ENST00000383931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.91□□□□□ -1.78
RNU6-1039P-201ENST00000383931 HNRNPUL2Q1KMD3 747 aaKnown RBP3.91□□□□□ -1.78
RNU6-1039P-201ENST00000383931 POLA2Q14181 598 aa3.9□□□□□ -1.79
RNU6-1039P-201ENST00000383931 POTEMA6NI47 508 aa3.89□□□□□ -1.79
RNU6-1039P-201ENST00000383931 C19orf67A6NJJ6 358 aa3.87□□□□□ -1.79
RNU6-1039P-201ENST00000383931 SLC4A2P04920 1241 aa3.87□□□□□ -1.79
RNU6-1039P-201ENST00000383931 POTEGQ6S5H5 508 aa3.87□□□□□ -1.79
RNU6-1039P-201ENST00000383931 SAMD1Q6SPF0 538 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1039P-201ENST00000383931 PCDH10Q9P2E7 1040 aa3.86□□□□□ -1.79
RNU6-1039P-201ENST00000383931 POTEIP0CG38 1075 aa3.85□□□□□ -1.79
RNU6-1039P-201ENST00000383931 PRKAR2AP13861 404 aaKnown RBP3.82□□□□□ -1.8
RNU6-1039P-201ENST00000383931 OTUD5Q96G74 571 aa3.8□□□□□ -1.8
RNU6-1039P-201ENST00000383931 OSCARQ8IYS5 282 aa3.79□□□□□ -1.8
RNU6-1039P-201ENST00000383931 ZBTB12Q9Y330 459 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1039P-201ENST00000383931 DCBLD2Q96PD2 775 aa3.74□□□□□ -1.81
RNU6-1039P-201ENST00000383931 POTEB2H3BUK9 544 aa3.72□□□□□ -1.81
RNU6-1039P-201ENST00000383931 CLEC11AQ9Y240 323 aa3.71□□□□□ -1.82
RNU6-1039P-201ENST00000383931 CLCN6P51797 869 aa3.7□□□□□ -1.82
RNU6-1039P-201ENST00000383931 CHADLQ6NUI6 762 aa3.69□□□□□ -1.82
RNU6-1039P-201ENST00000383931 CD44P16070 742 aaKnown RBP3.67□□□□□ -1.82
RNU6-1039P-201ENST00000383931 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1039P-201ENST00000383931 SPDYE1Q8NFV5 336 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1039P-201ENST00000383931 FAM163AQ96GL9 167 aaPredicted RBP3.65□□□□□ -1.83
RNU6-1039P-201ENST00000383931 MYCNP04198 464 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1039P-201ENST00000383931 SPDYE2BA6NHP3 402 aa3.62□□□□□ -1.83
RNU6-1039P-201ENST00000383931 SPDYE6P0CI01 402 aa3.62□□□□□ -1.83
RNU6-1039P-201ENST00000383931 SPDYE2Q495Y8 402 aa3.62□□□□□ -1.83
RNU6-1039P-201ENST00000383931 CDAN1Q8IWY9 1227 aa3.62□□□□□ -1.83
RNU6-1039P-201ENST00000383931 ATF5Q9Y2D1 282 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1039P-201ENST00000383931 MMRN1Q13201 1228 aa3.59□□□□□ -1.83
RNU6-1039P-201ENST00000383931 GALR2O43603 387 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1039P-201ENST00000383931 POTEJP0CG39 1038 aa3.58□□□□□ -1.84
RNU6-1039P-201ENST00000383931 ZNF579Q8NAF0 562 aaKnown RBP3.58□□□□□ -1.84
RNU6-1039P-201ENST00000383931 PRR29P0C7W0 189 aa3.57□□□□□ -1.84
RNU6-1039P-201ENST00000383931 MAMSTRQ6ZN01 415 aa3.57□□□□□ -1.84
RNU6-1039P-201ENST00000383931 FARP1Q9Y4F1 1045 aaPredicted RBP3.57□□□□□ -1.84
RNU6-1039P-201ENST00000383931 PELP1Q8IZL8 1130 aaKnown RBP3.56□□□□□ -1.84
RNU6-1039P-201ENST00000383931 SPNS2Q8IVW8 549 aa3.54□□□□□ -1.84
RNU6-1039P-201ENST00000383931 ZRANB1Q9UGI0 708 aa3.54□□□□□ -1.84
RNU6-1039P-201ENST00000383931 METRNQ9UJH8 293 aa3.54□□□□□ -1.84
RNU6-1039P-201ENST00000383931 SCUBE2Q9NQ36 999 aa3.53□□□□□ -1.84
RNU6-1039P-201ENST00000383931 ZNF692Q9BU19 519 aaPredicted RBP3.52□□□□□ -1.85
RNU6-1039P-201ENST00000383931 SSUH2Q9Y2M2 353 aa3.52□□□□□ -1.85
RNU6-1039P-201ENST00000383931 C7P10643 843 aa3.5□□□□□ -1.85
RNU6-1039P-201ENST00000383931 SLC39A7Q92504 469 aa3.49□□□□□ -1.85
RNU6-1039P-201ENST00000383931 FBLN2P98095 1184 aa3.48□□□□□ -1.85
RNU6-1039P-201ENST00000383931 ASTLQ6HA08 431 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1039P-201ENST00000383931 ATMINO43313 823 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1039P-201ENST00000383931 ST18O60284 1047 aa3.45□□□□□ -1.86
RNU6-1039P-201ENST00000383931 PHF12Q96QT6 1004 aa3.45□□□□□ -1.86
RNU6-1039P-201ENST00000383931 KCNA4P22459 653 aa3.44□□□□□ -1.86
RNU6-1039P-201ENST00000383931 PABPN1Q86U42 306 aaKnown RBP eCLIP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms