RNA–Protein interactions for RNA: ENST00000382580.6

CHEK2-204, Transcript of checkpoint kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHEK2, Length 1,971 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-204ENST00000382580 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
CHEK2-204ENST00000382580 CCDC180Q9P1Z9 1646 aa29.78■■■□□ 2.36
CHEK2-204ENST00000382580 ZCCHC6Q5VYS8 1495 aaKnown RBP28.5■■■□□ 2.15
CHEK2-204ENST00000382580 ABCC9O60706 1549 aa28.35■■■□□ 2.13
CHEK2-204ENST00000382580 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
CHEK2-204ENST00000382580 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
CHEK2-204ENST00000382580 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
CHEK2-204ENST00000382580 NACADO15069 1562 aa27.73■■■□□ 2.03
CHEK2-204ENST00000382580 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.02
CHEK2-204ENST00000382580 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
CHEK2-204ENST00000382580 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
CHEK2-204ENST00000382580 UNC13AQ9UPW8 1703 aa27.11■■□□□ 1.93
CHEK2-204ENST00000382580 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
CHEK2-204ENST00000382580 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
CHEK2-204ENST00000382580 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
CHEK2-204ENST00000382580 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
CHEK2-204ENST00000382580 BAZ1AQ9NRL2 1556 aaPredicted RBP26.27■■□□□ 1.8
CHEK2-204ENST00000382580 MROH2BQ7Z745 1585 aa26.26■■□□□ 1.79
CHEK2-204ENST00000382580 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
CHEK2-204ENST00000382580 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
CHEK2-204ENST00000382580 WIZO95785 1651 aa26.09■■□□□ 1.77
CHEK2-204ENST00000382580 EIF4G1Q04637 1599 aaKnown RBP25.96■■□□□ 1.75
CHEK2-204ENST00000382580 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
CHEK2-204ENST00000382580 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
CHEK2-204ENST00000382580 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
CHEK2-204ENST00000382580 ATAD2BQ9ULI0 1458 aa25.77■■□□□ 1.72
CHEK2-204ENST00000382580 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
CHEK2-204ENST00000382580 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
CHEK2-204ENST00000382580 HMGXB3Q12766 1538 aa25.56■■□□□ 1.68
CHEK2-204ENST00000382580 NCAPD3P42695 1498 aa25.55■■□□□ 1.68
CHEK2-204ENST00000382580 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
CHEK2-204ENST00000382580 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
CHEK2-204ENST00000382580 DNAJC5BQ9UF47 199 aa25.11■■□□□ 1.61
CHEK2-204ENST00000382580 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
CHEK2-204ENST00000382580 CFTRP13569 1480 aa24.94■■□□□ 1.58
CHEK2-204ENST00000382580 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
CHEK2-204ENST00000382580 CADPSQ9ULU8 1353 aa24.89■■□□□ 1.58
CHEK2-204ENST00000382580 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
CHEK2-204ENST00000382580 NESP48681 1621 aa24.81■■□□□ 1.56
CHEK2-204ENST00000382580 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
CHEK2-204ENST00000382580 WRNQ14191 1432 aaPredicted RBP eCLIP24.75■■□□□ 1.55
CHEK2-204ENST00000382580 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
CHEK2-204ENST00000382580 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
CHEK2-204ENST00000382580 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
CHEK2-204ENST00000382580 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
CHEK2-204ENST00000382580 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
CHEK2-204ENST00000382580 HRCP23327 699 aa24.58■■□□□ 1.53
CHEK2-204ENST00000382580 CUX1P39880 1505 aa24.57■■□□□ 1.52
CHEK2-204ENST00000382580 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
CHEK2-204ENST00000382580 CEP164Q9UPV0 1460 aa24.55■■□□□ 1.52
CHEK2-204ENST00000382580 FAM9AQ8IZU1 332 aaPredicted RBP24.45■■□□□ 1.5
CHEK2-204ENST00000382580 DNMBPQ6XZF7 1577 aa24.43■■□□□ 1.5
CHEK2-204ENST00000382580 TOPBP1Q92547 1522 aa24.39■■□□□ 1.49
CHEK2-204ENST00000382580 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
CHEK2-204ENST00000382580 SOGA1O94964 1423 aa24.37■■□□□ 1.49
CHEK2-204ENST00000382580 PCGF6Q9BYE7 350 aa24.36■■□□□ 1.49
CHEK2-204ENST00000382580 FGD5Q6ZNL6 1462 aa24.34■■□□□ 1.49
CHEK2-204ENST00000382580 ERCC6Q03468 1493 aa24.34■■□□□ 1.49
CHEK2-204ENST00000382580 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
CHEK2-204ENST00000382580 MRC2Q9UBG0 1479 aa24.3■■□□□ 1.48
CHEK2-204ENST00000382580 LOC105371045A0A1W2PR82 267 aa24.27■■□□□ 1.48
CHEK2-204ENST00000382580 EEA1Q15075 1411 aa24.25■■□□□ 1.47
CHEK2-204ENST00000382580 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
CHEK2-204ENST00000382580 THOC2Q8NI27 1593 aaKnown RBP24.19■■□□□ 1.46
CHEK2-204ENST00000382580 WDR62O43379 1518 aa24.17■■□□□ 1.46
CHEK2-204ENST00000382580 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
CHEK2-204ENST00000382580 EHMT2Q96KQ7 1210 aa24.16■■□□□ 1.46
CHEK2-204ENST00000382580 CUX2O14529 1486 aa24.15■■□□□ 1.46
CHEK2-204ENST00000382580 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
CHEK2-204ENST00000382580 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
CHEK2-204ENST00000382580 WDR97A6NE52 1622 aa24.12■■□□□ 1.45
CHEK2-204ENST00000382580 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
CHEK2-204ENST00000382580 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
CHEK2-204ENST00000382580 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
CHEK2-204ENST00000382580 KIF21BO75037 1637 aa24.01■■□□□ 1.43
CHEK2-204ENST00000382580 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
CHEK2-204ENST00000382580 GOLGA3Q08378 1498 aa23.95■■□□□ 1.42
CHEK2-204ENST00000382580 IFT140Q96RY7 1462 aa23.95■■□□□ 1.42
CHEK2-204ENST00000382580 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
CHEK2-204ENST00000382580 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
CHEK2-204ENST00000382580 IGF1RP08069 1367 aa23.89■■□□□ 1.42
CHEK2-204ENST00000382580 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.41
CHEK2-204ENST00000382580 PRXQ9BXM0 1461 aa23.89■■□□□ 1.41
CHEK2-204ENST00000382580 PBRM1Q86U86 1689 aa23.88■■□□□ 1.41
CHEK2-204ENST00000382580 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
CHEK2-204ENST00000382580 UBTFP17480 764 aaKnown RBP23.85■■□□□ 1.41
CHEK2-204ENST00000382580 ZNF608Q9ULD9 1512 aaPredicted RBP23.85■■□□□ 1.41
CHEK2-204ENST00000382580 CUL7Q14999 1698 aa23.83■■□□□ 1.41
CHEK2-204ENST00000382580 AQRO60306 1485 aaKnown RBP eCLIP23.83■■□□□ 1.411e-11■■■■■ 27.3
CHEK2-204ENST00000382580 EIF4G3O43432 1585 aaKnown RBP23.82■■□□□ 1.4
CHEK2-204ENST00000382580 CARMIL1Q5VZK9 1371 aa23.8■■□□□ 1.4
CHEK2-204ENST00000382580 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
CHEK2-204ENST00000382580 ZEB1P37275 1124 aaPredicted RBP23.78■■□□□ 1.4
CHEK2-204ENST00000382580 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
CHEK2-204ENST00000382580 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
CHEK2-204ENST00000382580 CEP162Q5TB80 1403 aa23.69■■□□□ 1.38
CHEK2-204ENST00000382580 ADAMTS12P58397 1594 aa23.68■■□□□ 1.38
CHEK2-204ENST00000382580 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
CHEK2-204ENST00000382580 FHAD1B1AJZ9 1412 aa23.61■■□□□ 1.37
CHEK2-204ENST00000382580 CTTNBP2Q8WZ74 1663 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms