RNA–Protein interactions for RNA: ENST00000382490.9

MSRA-202, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-202ENST00000382490 NISCHQ9Y2I1 1504 aa29.83■■■□□ 2.37
MSRA-202ENST00000382490 CCDC180Q9P1Z9 1646 aa25.93■■□□□ 1.74
MSRA-202ENST00000382490 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
MSRA-202ENST00000382490 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
MSRA-202ENST00000382490 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
MSRA-202ENST00000382490 ABCC9O60706 1549 aa24.61■■□□□ 1.53
MSRA-202ENST00000382490 MYO15BQ96JP2 1530 aa24.38■■□□□ 1.49
MSRA-202ENST00000382490 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
MSRA-202ENST00000382490 NACADO15069 1562 aa24.22■■□□□ 1.47
MSRA-202ENST00000382490 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
MSRA-202ENST00000382490 SCRIBQ14160 1630 aa23.85■■□□□ 1.41
MSRA-202ENST00000382490 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
MSRA-202ENST00000382490 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
MSRA-202ENST00000382490 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
MSRA-202ENST00000382490 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
MSRA-202ENST00000382490 CECR2Q9BXF3 1484 aa23.2■■□□□ 1.3
MSRA-202ENST00000382490 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
MSRA-202ENST00000382490 MROH2BQ7Z745 1585 aa23.04■■□□□ 1.28
MSRA-202ENST00000382490 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
MSRA-202ENST00000382490 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
MSRA-202ENST00000382490 WIZO95785 1651 aa22.81■■□□□ 1.24
MSRA-202ENST00000382490 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
MSRA-202ENST00000382490 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.2
MSRA-202ENST00000382490 EIF4G1Q04637 1599 aaKnown RBP22.57■■□□□ 1.2
MSRA-202ENST00000382490 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
MSRA-202ENST00000382490 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
MSRA-202ENST00000382490 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
MSRA-202ENST00000382490 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
MSRA-202ENST00000382490 NCAPD3P42695 1498 aa22.41■■□□□ 1.18
MSRA-202ENST00000382490 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.18
MSRA-202ENST00000382490 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
MSRA-202ENST00000382490 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
MSRA-202ENST00000382490 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
MSRA-202ENST00000382490 CFTRP13569 1480 aa21.89■■□□□ 1.09
MSRA-202ENST00000382490 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
MSRA-202ENST00000382490 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
MSRA-202ENST00000382490 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.09
MSRA-202ENST00000382490 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
MSRA-202ENST00000382490 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
MSRA-202ENST00000382490 PRDM2Q13029 1718 aa21.61■■□□□ 1.05
MSRA-202ENST00000382490 NESP48681 1621 aa21.61■■□□□ 1.05
MSRA-202ENST00000382490 FAM9AQ8IZU1 332 aaPredicted RBP21.6■■□□□ 1.05
MSRA-202ENST00000382490 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.05
MSRA-202ENST00000382490 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
MSRA-202ENST00000382490 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
MSRA-202ENST00000382490 FANCD2Q9BXW9 1451 aa21.55■■□□□ 1.04
MSRA-202ENST00000382490 CUX1P39880 1505 aa21.54■■□□□ 1.04
MSRA-202ENST00000382490 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
MSRA-202ENST00000382490 SOGA1O94964 1423 aa21.51■■□□□ 1.03
MSRA-202ENST00000382490 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.03
MSRA-202ENST00000382490 RUSC2Q8N2Y8 1516 aa21.44■■□□□ 1.02
MSRA-202ENST00000382490 EEA1Q15075 1411 aa21.44■■□□□ 1.02
MSRA-202ENST00000382490 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.02
MSRA-202ENST00000382490 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
MSRA-202ENST00000382490 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
MSRA-202ENST00000382490 TOPBP1Q92547 1522 aa21.31■■□□□ 1
MSRA-202ENST00000382490 FGD5Q6ZNL6 1462 aa21.3■■□□□ 1
MSRA-202ENST00000382490 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
MSRA-202ENST00000382490 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
MSRA-202ENST00000382490 KIF21AQ7Z4S6 1674 aa21.26■□□□□ 0.99
MSRA-202ENST00000382490 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
MSRA-202ENST00000382490 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
MSRA-202ENST00000382490 CUX2O14529 1486 aa21.16■□□□□ 0.98
MSRA-202ENST00000382490 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
MSRA-202ENST00000382490 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
MSRA-202ENST00000382490 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
MSRA-202ENST00000382490 KIF21BO75037 1637 aa21.12■□□□□ 0.97
MSRA-202ENST00000382490 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
MSRA-202ENST00000382490 TNIKQ9UKE5 1360 aa21.11■□□□□ 0.97
MSRA-202ENST00000382490 IGF1RP08069 1367 aa21.1■□□□□ 0.97
MSRA-202ENST00000382490 PRXQ9BXM0 1461 aa21.09■□□□□ 0.97
MSRA-202ENST00000382490 UBTFP17480 764 aaKnown RBP21.07■□□□□ 0.96
MSRA-202ENST00000382490 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
MSRA-202ENST00000382490 RAPGEF2Q9Y4G8 1499 aa21.05■□□□□ 0.96
MSRA-202ENST00000382490 WDR62O43379 1518 aa21.03■□□□□ 0.96
MSRA-202ENST00000382490 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
MSRA-202ENST00000382490 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
MSRA-202ENST00000382490 TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
MSRA-202ENST00000382490 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
MSRA-202ENST00000382490 CARMIL1Q5VZK9 1371 aa20.96■□□□□ 0.95
MSRA-202ENST00000382490 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
MSRA-202ENST00000382490 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
MSRA-202ENST00000382490 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
MSRA-202ENST00000382490 IFT140Q96RY7 1462 aa20.91■□□□□ 0.94
MSRA-202ENST00000382490 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
MSRA-202ENST00000382490 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.93
MSRA-202ENST00000382490 ZNF608Q9ULD9 1512 aaPredicted RBP20.8■□□□□ 0.92
MSRA-202ENST00000382490 CUL7Q14999 1698 aa20.8■□□□□ 0.92
MSRA-202ENST00000382490 CLIP1P30622 1438 aa20.8■□□□□ 0.92
MSRA-202ENST00000382490 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
MSRA-202ENST00000382490 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
MSRA-202ENST00000382490 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
MSRA-202ENST00000382490 PBRM1Q86U86 1689 aa20.69■□□□□ 0.9
MSRA-202ENST00000382490 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.9
MSRA-202ENST00000382490 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
MSRA-202ENST00000382490 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
MSRA-202ENST00000382490 ARAP1Q96P48 1450 aa20.61■□□□□ 0.89
MSRA-202ENST00000382490 ARHGAP35Q9NRY4 1499 aa20.61■□□□□ 0.89
MSRA-202ENST00000382490 SNAPC4Q5SXM2 1469 aa20.59■□□□□ 0.89
MSRA-202ENST00000382490 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms