RNA–Protein interactions for RNA: ENST00000380994.5

PITRM1-203, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 5 BASIC

Gene PITRM1, Length 2,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-203ENST00000380994 NISCHQ9Y2I1 1504 aa20.16■□□□□ 0.82
PITRM1-203ENST00000380994 PELP1Q8IZL8 1130 aaKnown RBP18.05■□□□□ 0.48
PITRM1-203ENST00000380994 HRCP23327 699 aa17.89■□□□□ 0.46
PITRM1-203ENST00000380994 PPARGC1BQ86YN6 1023 aaKnown RBP17.55■□□□□ 0.4
PITRM1-203ENST00000380994 MYT1Q01538 1121 aa17.5■□□□□ 0.39
PITRM1-203ENST00000380994 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
PITRM1-203ENST00000380994 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
PITRM1-203ENST00000380994 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
PITRM1-203ENST00000380994 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
PITRM1-203ENST00000380994 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
PITRM1-203ENST00000380994 SUPT5HO00267 1087 aaKnown RBP16.93■□□□□ 0.3
PITRM1-203ENST00000380994 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
PITRM1-203ENST00000380994 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
PITRM1-203ENST00000380994 CHIC1Q5VXU3 224 aa16.64■□□□□ 0.25
PITRM1-203ENST00000380994 DCAF1Q9Y4B6 1507 aa16.62■□□□□ 0.25
PITRM1-203ENST00000380994 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
PITRM1-203ENST00000380994 ZEB1P37275 1124 aaPredicted RBP16.57■□□□□ 0.24
PITRM1-203ENST00000380994 TTBK1Q5TCY1 1321 aaPredicted RBP16.57■□□□□ 0.24
PITRM1-203ENST00000380994 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
PITRM1-203ENST00000380994 TRIM26Q12899 539 aaPredicted RBP16.54■□□□□ 0.24
PITRM1-203ENST00000380994 DCAF8L2P0C7V8 631 aa16.44■□□□□ 0.22
PITRM1-203ENST00000380994 BCL11AQ9H165 835 aa16.38■□□□□ 0.21
PITRM1-203ENST00000380994 CENPBP07199 599 aaPredicted RBP16.34■□□□□ 0.21
PITRM1-203ENST00000380994 LOC105371045A0A1W2PR82 267 aa16.29■□□□□ 0.2
PITRM1-203ENST00000380994 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
PITRM1-203ENST00000380994 ABCC9O60706 1549 aa16.22■□□□□ 0.19
PITRM1-203ENST00000380994 PRKCSHP14314 528 aaPredicted RBP16.15■□□□□ 0.18
PITRM1-203ENST00000380994 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
PITRM1-203ENST00000380994 ANP32EQ9BTT0 268 aa16■□□□□ 0.15
PITRM1-203ENST00000380994 RSF1Q96T23 1441 aaPredicted RBP16■□□□□ 0.15
PITRM1-203ENST00000380994 SCRIBQ14160 1630 aa15.98■□□□□ 0.15
PITRM1-203ENST00000380994 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
PITRM1-203ENST00000380994 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
PITRM1-203ENST00000380994 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
PITRM1-203ENST00000380994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
PITRM1-203ENST00000380994 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
PITRM1-203ENST00000380994 CCER1Q8TC90 406 aaPredicted RBP15.8■□□□□ 0.12
PITRM1-203ENST00000380994 NACADO15069 1562 aa15.75■□□□□ 0.11
PITRM1-203ENST00000380994 ERICH6Q7L0X2 663 aa15.72■□□□□ 0.11
PITRM1-203ENST00000380994 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.1
PITRM1-203ENST00000380994 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
PITRM1-203ENST00000380994 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
PITRM1-203ENST00000380994 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
PITRM1-203ENST00000380994 MIER1Q8N108 512 aa15.61■□□□□ 0.09
PITRM1-203ENST00000380994 ZNF316A6NFI3 1004 aaPredicted RBP15.61■□□□□ 0.09
PITRM1-203ENST00000380994 WIZO95785 1651 aa15.59■□□□□ 0.09
PITRM1-203ENST00000380994 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.08
PITRM1-203ENST00000380994 APLP2Q06481 763 aa15.56■□□□□ 0.08
PITRM1-203ENST00000380994 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
PITRM1-203ENST00000380994 CLSPNQ9HAW4 1339 aa15.49■□□□□ 0.07
PITRM1-203ENST00000380994 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
PITRM1-203ENST00000380994 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
PITRM1-203ENST00000380994 SMARCA4P51532 1647 aa15.33■□□□□ 0.04
PITRM1-203ENST00000380994 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
PITRM1-203ENST00000380994 ANO8Q9HCE9 1232 aaPredicted RBP15.32■□□□□ 0.04
PITRM1-203ENST00000380994 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
PITRM1-203ENST00000380994 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
PITRM1-203ENST00000380994 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
PITRM1-203ENST00000380994 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
PITRM1-203ENST00000380994 BCANQ96GW7 911 aa15.26■□□□□ 0.03
PITRM1-203ENST00000380994 UNC13AQ9UPW8 1703 aa15.23■□□□□ 0.03
PITRM1-203ENST00000380994 EEA1Q15075 1411 aa15.23■□□□□ 0.03
PITRM1-203ENST00000380994 CEP162Q5TB80 1403 aa15.23■□□□□ 0.03
PITRM1-203ENST00000380994 MSH5O43196 834 aa15.22■□□□□ 0.03
PITRM1-203ENST00000380994 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.03
PITRM1-203ENST00000380994 SOGA1O94964 1423 aa15.16■□□□□ 0.02
PITRM1-203ENST00000380994 DEKP35659 375 aaKnown RBP15.11■□□□□ 0.01
PITRM1-203ENST00000380994 GOLGA3Q08378 1498 aa15.1■□□□□ 0.01
PITRM1-203ENST00000380994 SALL2Q9Y467 1007 aaPredicted RBP15.1■□□□□ 0.01
PITRM1-203ENST00000380994 FKBP8Q14318 412 aa15.09■□□□□ 0.01
PITRM1-203ENST00000380994 BICRAQ9NZM4 1560 aa15.08■□□□□ 0
PITRM1-203ENST00000380994 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
PITRM1-203ENST00000380994 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
PITRM1-203ENST00000380994 CCDC136Q96JN2 1154 aa15.04■□□□□ -0
PITRM1-203ENST00000380994 MYT1LQ9UL68 1186 aa15.04■□□□□ -0
PITRM1-203ENST00000380994 KIF21BO75037 1637 aa15.02■□□□□ -0
PITRM1-203ENST00000380994 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02□□□□□ -0.01
PITRM1-203ENST00000380994 UBTFP17480 764 aaKnown RBP15.01□□□□□ -0.01
PITRM1-203ENST00000380994 ITGAEP38570 1179 aa15.01□□□□□ -0.01
PITRM1-203ENST00000380994 UBE2Q2Q8WVN8 375 aa15□□□□□ -0.01
PITRM1-203ENST00000380994 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
PITRM1-203ENST00000380994 FANCIQ9NVI1 1328 aa14.98□□□□□ -0.01
PITRM1-203ENST00000380994 SYNJ1O43426 1573 aa14.97□□□□□ -0.01
PITRM1-203ENST00000380994 ERICH6BQ5W0A0 696 aa14.94□□□□□ -0.02
PITRM1-203ENST00000380994 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
PITRM1-203ENST00000380994 NEFLP07196 543 aa14.92□□□□□ -0.02
PITRM1-203ENST00000380994 KCNH8Q96L42 1107 aa14.91□□□□□ -0.02
PITRM1-203ENST00000380994 CLIP1P30622 1438 aa14.9□□□□□ -0.02
PITRM1-203ENST00000380994 VPS8Q8N3P4 1428 aa14.89□□□□□ -0.03
PITRM1-203ENST00000380994 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
PITRM1-203ENST00000380994 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.87□□□□□ -0.03
PITRM1-203ENST00000380994 ATAD2BQ9ULI0 1458 aa14.85□□□□□ -0.03
PITRM1-203ENST00000380994 RAPGEF2Q9Y4G8 1499 aa14.81□□□□□ -0.04
PITRM1-203ENST00000380994 NBR1Q14596 966 aa14.8□□□□□ -0.04
PITRM1-203ENST00000380994 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
PITRM1-203ENST00000380994 IL27Q8NEV9 243 aa14.8□□□□□ -0.04
PITRM1-203ENST00000380994 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
PITRM1-203ENST00000380994 CDK11AQ9UQ88 783 aaPredicted RBP14.78□□□□□ -0.04
PITRM1-203ENST00000380994 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.05
PITRM1-203ENST00000380994 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms