RNA–Protein interactions for RNA: ENST00000380992.5

TSSC4-202, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSSC4, Length 992 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-202ENST00000380992 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
TSSC4-202ENST00000380992 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
TSSC4-202ENST00000380992 ABCC9O60706 1549 aa35.97■■■■□ 3.35
TSSC4-202ENST00000380992 RB1CC1Q8TDY2 1594 aa34.5■■■■□ 3.11
TSSC4-202ENST00000380992 NACADO15069 1562 aa34.38■■■■□ 3.09
TSSC4-202ENST00000380992 DCAF8L2P0C7V8 631 aa34.1■■■■□ 3.05
TSSC4-202ENST00000380992 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
TSSC4-202ENST00000380992 ZCCHC6Q5VYS8 1495 aaKnown RBP33.8■■■■□ 3
TSSC4-202ENST00000380992 DCAF1Q9Y4B6 1507 aa33.74■■■□□ 2.99
TSSC4-202ENST00000380992 UNC13AQ9UPW8 1703 aa33.74■■■□□ 2.99
TSSC4-202ENST00000380992 PABPN1Q86U42 306 aaKnown RBP eCLIP33.53■■■□□ 2.96
TSSC4-202ENST00000380992 DNAJC5BQ9UF47 199 aa33.48■■■□□ 2.95
TSSC4-202ENST00000380992 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
TSSC4-202ENST00000380992 SHROOM4Q9ULL8 1493 aa33.14■■■□□ 2.9
TSSC4-202ENST00000380992 SCRIBQ14160 1630 aa33.09■■■□□ 2.89
TSSC4-202ENST00000380992 EIF4G1Q04637 1599 aaKnown RBP32.6■■■□□ 2.81
TSSC4-202ENST00000380992 CC2D2AQ9P2K1 1620 aa32.58■■■□□ 2.81
TSSC4-202ENST00000380992 CECR2Q9BXF3 1484 aa32.41■■■□□ 2.78
TSSC4-202ENST00000380992 NCAPD3P42695 1498 aa31.73■■■□□ 2.67
TSSC4-202ENST00000380992 SMARCA4P51532 1647 aa31.68■■■□□ 2.66
TSSC4-202ENST00000380992 ATAD2BQ9ULI0 1458 aa31.63■■■□□ 2.65
TSSC4-202ENST00000380992 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
TSSC4-202ENST00000380992 SMARCA2P51531 1590 aa31.59■■■□□ 2.65
TSSC4-202ENST00000380992 HMGXB3Q12766 1538 aa31.5■■■□□ 2.63
TSSC4-202ENST00000380992 PEG3Q9GZU2 1588 aa31.44■■■□□ 2.62
TSSC4-202ENST00000380992 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
TSSC4-202ENST00000380992 BAZ1BQ9UIG0 1483 aaKnown RBP31.32■■■□□ 2.6
TSSC4-202ENST00000380992 ERCC6Q03468 1493 aa31.04■■■□□ 2.56
TSSC4-202ENST00000380992 NESP48681 1621 aa31■■■□□ 2.55
TSSC4-202ENST00000380992 WIZO95785 1651 aa30.98■■■□□ 2.55
TSSC4-202ENST00000380992 CUX2O14529 1486 aa30.97■■■□□ 2.55
TSSC4-202ENST00000380992 LAMC3Q9Y6N6 1575 aa30.96■■■□□ 2.55
TSSC4-202ENST00000380992 RSF1Q96T23 1441 aaPredicted RBP30.83■■■□□ 2.53
TSSC4-202ENST00000380992 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
TSSC4-202ENST00000380992 PDS5BQ9NTI5 1447 aa30.74■■■□□ 2.51
TSSC4-202ENST00000380992 THOC2Q8NI27 1593 aaKnown RBP30.68■■■□□ 2.5
TSSC4-202ENST00000380992 KIF21AQ7Z4S6 1674 aa30.67■■■□□ 2.5
TSSC4-202ENST00000380992 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
TSSC4-202ENST00000380992 DNAJC5Q9H3Z4 198 aa30.57■■■□□ 2.48
TSSC4-202ENST00000380992 CFTRP13569 1480 aa30.48■■■□□ 2.47
TSSC4-202ENST00000380992 MRC2Q9UBG0 1479 aa30.42■■■□□ 2.46
TSSC4-202ENST00000380992 FANCD2Q9BXW9 1451 aa30.36■■■□□ 2.45
TSSC4-202ENST00000380992 CEP164Q9UPV0 1460 aa30.36■■■□□ 2.45
TSSC4-202ENST00000380992 WDR62O43379 1518 aa30.36■■■□□ 2.45
TSSC4-202ENST00000380992 CCDC88BA6NC98 1476 aa30.27■■■□□ 2.44
TSSC4-202ENST00000380992 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
TSSC4-202ENST00000380992 URB2Q14146 1524 aaKnown RBP30.07■■■□□ 2.4
TSSC4-202ENST00000380992 ABCC8Q09428 1581 aa29.89■■■□□ 2.38
TSSC4-202ENST00000380992 TOPBP1Q92547 1522 aa29.83■■■□□ 2.37
TSSC4-202ENST00000380992 IFT140Q96RY7 1462 aa29.77■■■□□ 2.36
TSSC4-202ENST00000380992 DNMBPQ6XZF7 1577 aa29.77■■■□□ 2.36
TSSC4-202ENST00000380992 ZNF608Q9ULD9 1512 aaPredicted RBP29.62■■■□□ 2.33
TSSC4-202ENST00000380992 OSCARQ8IYS5 282 aa29.61■■■□□ 2.33
TSSC4-202ENST00000380992 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
TSSC4-202ENST00000380992 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
TSSC4-202ENST00000380992 POLA1P09884 1462 aaPredicted RBP29.54■■■□□ 2.32
TSSC4-202ENST00000380992 EIF4G3O43432 1585 aaKnown RBP29.5■■■□□ 2.31
TSSC4-202ENST00000380992 SOGA1O94964 1423 aa29.43■■■□□ 2.3
TSSC4-202ENST00000380992 CUX1P39880 1505 aa29.42■■■□□ 2.3
TSSC4-202ENST00000380992 AQRO60306 1485 aaKnown RBP eCLIP29.41■■■□□ 2.3
TSSC4-202ENST00000380992 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
TSSC4-202ENST00000380992 RAD54L2Q9Y4B4 1467 aa29.38■■■□□ 2.29
TSSC4-202ENST00000380992 WDR97A6NE52 1622 aa29.37■■■□□ 2.29
TSSC4-202ENST00000380992 TDRD9Q8NDG6 1382 aaKnown RBP29.27■■■□□ 2.28
TSSC4-202ENST00000380992 CHD1O14646 1710 aa29.24■■■□□ 2.27
TSSC4-202ENST00000380992 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
TSSC4-202ENST00000380992 RIMBP3CA6NJZ7 1639 aa29.14■■■□□ 2.26
TSSC4-202ENST00000380992 RIMBP3BA6NNM3 1639 aa29.14■■■□□ 2.26
TSSC4-202ENST00000380992 RIMBP3Q9UFD9 1639 aa29.14■■■□□ 2.26
TSSC4-202ENST00000380992 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
TSSC4-202ENST00000380992 ABCA10Q8WWZ4 1543 aa29.13■■■□□ 2.25
TSSC4-202ENST00000380992 MAGI1Q96QZ7 1491 aaPredicted RBP29.12■■■□□ 2.25
TSSC4-202ENST00000380992 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
TSSC4-202ENST00000380992 BIVM-ERCC5R4GMW8 1640 aa29.1■■■□□ 2.25
TSSC4-202ENST00000380992 FBLN2P98095 1184 aa29.1■■■□□ 2.25
TSSC4-202ENST00000380992 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
TSSC4-202ENST00000380992 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
TSSC4-202ENST00000380992 ARHGEF11O15085 1522 aa29.08■■■□□ 2.25
TSSC4-202ENST00000380992 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
TSSC4-202ENST00000380992 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
TSSC4-202ENST00000380992 ABCA5Q8WWZ7 1642 aa29.04■■■□□ 2.24
TSSC4-202ENST00000380992 CHMP7Q8WUX9 453 aaPredicted RBP29.02■■■□□ 2.24
TSSC4-202ENST00000380992 SYNJ2O15056 1496 aa29■■■□□ 2.23
TSSC4-202ENST00000380992 SYNJ1O43426 1573 aa29■■■□□ 2.23
TSSC4-202ENST00000380992 CLASP1Q7Z460 1538 aa28.93■■■□□ 2.22
TSSC4-202ENST00000380992 CYB5RLQ6IPT4 315 aa28.82■■■□□ 2.2
TSSC4-202ENST00000380992 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
TSSC4-202ENST00000380992 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
TSSC4-202ENST00000380992 ADAMTS12P58397 1594 aa28.76■■■□□ 2.19
TSSC4-202ENST00000380992 GRIN2AQ12879 1464 aa28.75■■■□□ 2.19
TSSC4-202ENST00000380992 FHAD1B1AJZ9 1412 aa28.73■■■□□ 2.19
TSSC4-202ENST00000380992 NUP160Q12769 1436 aa28.67■■■□□ 2.18
TSSC4-202ENST00000380992 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
TSSC4-202ENST00000380992 SHROOM2Q13796 1616 aa28.53■■■□□ 2.16
TSSC4-202ENST00000380992 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
TSSC4-202ENST00000380992 IGF1RP08069 1367 aa28.48■■■□□ 2.15
TSSC4-202ENST00000380992 ERCC6L2Q5T890 1561 aa28.44■■■□□ 2.14
TSSC4-202ENST00000380992 CUL7Q14999 1698 aa28.42■■■□□ 2.14
TSSC4-202ENST00000380992 JPH4Q96JJ6 628 aa28.38■■■□□ 2.13
TSSC4-202ENST00000380992 TRHP20396 242 aaPredicted RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms