RNA–Protein interactions for RNA: ENST00000380968.6

MLH3-202, Transcript of mutL homolog 3, humanhuman

TSL 1 (best) BASIC

Gene MLH3, Length 7,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-202ENST00000380968 MYT1Q01538 1121 aa11.91□□□□□ -0.5
MLH3-202ENST00000380968 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
MLH3-202ENST00000380968 TTBK1Q5TCY1 1321 aaPredicted RBP11.11□□□□□ -0.63
MLH3-202ENST00000380968 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
MLH3-202ENST00000380968 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
MLH3-202ENST00000380968 CCER1Q8TC90 406 aaPredicted RBP10.46□□□□□ -0.74
MLH3-202ENST00000380968 HRCP23327 699 aa10.43□□□□□ -0.74
MLH3-202ENST00000380968 ZEB1P37275 1124 aaPredicted RBP10.41□□□□□ -0.74
MLH3-202ENST00000380968 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
MLH3-202ENST00000380968 YTHDC1Q96MU7 727 aaKnown RBP10.22□□□□□ -0.77
MLH3-202ENST00000380968 SLC24A1O60721 1099 aa10.13□□□□□ -0.79
MLH3-202ENST00000380968 BCL11AQ9H165 835 aa10.12□□□□□ -0.79
MLH3-202ENST00000380968 GLIPR1L2Q4G1C9 344 aa10.06□□□□□ -0.8
MLH3-202ENST00000380968 NEFLP07196 543 aa10.05□□□□□ -0.8
MLH3-202ENST00000380968 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
MLH3-202ENST00000380968 PPARGC1BQ86YN6 1023 aaKnown RBP10□□□□□ -0.81
MLH3-202ENST00000380968 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
MLH3-202ENST00000380968 ACIN1Q9UKV3 1341 aaKnown RBP9.97□□□□□ -0.81
MLH3-202ENST00000380968 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
MLH3-202ENST00000380968 RANGAP1P46060 587 aaPredicted RBP9.94□□□□□ -0.82
MLH3-202ENST00000380968 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
MLH3-202ENST00000380968 EIF5BO60841 1220 aaKnown RBP9.93□□□□□ -0.82
MLH3-202ENST00000380968 SCAF1Q9H7N4 1312 aaKnown RBP9.93□□□□□ -0.82
MLH3-202ENST00000380968 ANP32EQ9BTT0 268 aa9.87□□□□□ -0.83
MLH3-202ENST00000380968 SUPT5HO00267 1087 aaKnown RBP9.86□□□□□ -0.83
MLH3-202ENST00000380968 TRIM26Q12899 539 aaPredicted RBP9.81□□□□□ -0.84
MLH3-202ENST00000380968 DIEXFQ68CQ4 756 aaKnown RBP9.75□□□□□ -0.85
MLH3-202ENST00000380968 CLSPNQ9HAW4 1339 aa9.74□□□□□ -0.85
MLH3-202ENST00000380968 DAXXQ9UER7 740 aaPredicted RBP9.71□□□□□ -0.86
MLH3-202ENST00000380968 NEUROD1Q13562 356 aa9.65□□□□□ -0.86
MLH3-202ENST00000380968 FAM9AQ8IZU1 332 aaPredicted RBP9.64□□□□□ -0.87
MLH3-202ENST00000380968 ZNF316A6NFI3 1004 aaPredicted RBP9.61□□□□□ -0.87
MLH3-202ENST00000380968 APLP2Q06481 763 aa9.6□□□□□ -0.87
MLH3-202ENST00000380968 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
MLH3-202ENST00000380968 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
MLH3-202ENST00000380968 BCANQ96GW7 911 aa9.51□□□□□ -0.89
MLH3-202ENST00000380968 ERICH6BQ5W0A0 696 aa9.51□□□□□ -0.89
MLH3-202ENST00000380968 CSRNP3Q8WYN3 585 aa9.5□□□□□ -0.89
MLH3-202ENST00000380968 ANP32AP39687 249 aaKnown RBP9.46□□□□□ -0.9
MLH3-202ENST00000380968 PKNOX2Q96KN3 472 aa9.46□□□□□ -0.9
MLH3-202ENST00000380968 NBR1Q14596 966 aa9.41□□□□□ -0.9
MLH3-202ENST00000380968 EHMT2Q96KQ7 1210 aa9.41□□□□□ -0.9
MLH3-202ENST00000380968 NCLP19338 710 aaKnown RBP9.4□□□□□ -0.9
MLH3-202ENST00000380968 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
MLH3-202ENST00000380968 DEKP35659 375 aaKnown RBP9.39□□□□□ -0.91
MLH3-202ENST00000380968 RTN4Q9NQC3 1192 aaKnown RBP9.37□□□□□ -0.91
MLH3-202ENST00000380968 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.35□□□□□ -0.91
MLH3-202ENST00000380968 CDK11BP21127 795 aaKnown RBP9.33□□□□□ -0.92
MLH3-202ENST00000380968 ZNF326Q5BKZ1 582 aaKnown RBP9.32□□□□□ -0.92
MLH3-202ENST00000380968 CCDC136Q96JN2 1154 aa9.32□□□□□ -0.92
MLH3-202ENST00000380968 ZBTB47Q9UFB7 747 aaPredicted RBP9.31□□□□□ -0.92
MLH3-202ENST00000380968 SHROOM4Q9ULL8 1493 aa9.3□□□□□ -0.92
MLH3-202ENST00000380968 FKBP8Q14318 412 aa9.3□□□□□ -0.92
MLH3-202ENST00000380968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.29□□□□□ -0.92
MLH3-202ENST00000380968 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
MLH3-202ENST00000380968 UBE2Q2Q8WVN8 375 aa9.28□□□□□ -0.92
MLH3-202ENST00000380968 ANO8Q9HCE9 1232 aaPredicted RBP9.28□□□□□ -0.92
MLH3-202ENST00000380968 NEFMP07197 916 aa9.27□□□□□ -0.93
MLH3-202ENST00000380968 A0A0U1RQG5 324 aaPredicted RBP9.25□□□□□ -0.93
MLH3-202ENST00000380968 TRIM44Q96DX7 344 aaPredicted RBP9.25□□□□□ -0.93
MLH3-202ENST00000380968 DCAF8L2P0C7V8 631 aa9.24□□□□□ -0.93
MLH3-202ENST00000380968 NAP1L5Q96NT1 182 aaPredicted RBP9.24□□□□□ -0.93
MLH3-202ENST00000380968 RSPH6AQ9H0K4 717 aa9.23□□□□□ -0.93
MLH3-202ENST00000380968 ANP32BQ92688 251 aaKnown RBP9.22□□□□□ -0.93
MLH3-202ENST00000380968 POLR3GLQ9BT43 218 aa9.22□□□□□ -0.93
MLH3-202ENST00000380968 HSP90AA1P07900 732 aaKnown RBP9.2□□□□□ -0.94
MLH3-202ENST00000380968 PDE4CQ08493 712 aa9.18□□□□□ -0.94
MLH3-202ENST00000380968 TSHZ2Q9NRE2 1034 aa9.17□□□□□ -0.94
MLH3-202ENST00000380968 SUPT16HQ9Y5B9 1047 aaKnown RBP9.17□□□□□ -0.94
MLH3-202ENST00000380968 NOP58Q9Y2X3 529 aaKnown RBP9.16□□□□□ -0.94
MLH3-202ENST00000380968 RBM19Q9Y4C8 960 aaKnown RBP9.16□□□□□ -0.94
MLH3-202ENST00000380968 HSP90AA2PQ14568 343 aaPredicted RBP9.16□□□□□ -0.94
MLH3-202ENST00000380968 CHIC1Q5VXU3 224 aa9.16□□□□□ -0.94
MLH3-202ENST00000380968 NPM2Q86SE8 214 aaKnown RBP9.16□□□□□ -0.94
MLH3-202ENST00000380968 PPM1GO15355 546 aaPredicted RBP9.16□□□□□ -0.94
MLH3-202ENST00000380968 CNGB1Q14028 1251 aaPredicted RBP9.14□□□□□ -0.95
MLH3-202ENST00000380968 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
MLH3-202ENST00000380968 SALL2Q9Y467 1007 aaPredicted RBP9.11□□□□□ -0.95
MLH3-202ENST00000380968 TRIM41Q8WV44 630 aa9.11□□□□□ -0.95
MLH3-202ENST00000380968 DCAF1Q9Y4B6 1507 aa9.1□□□□□ -0.95
MLH3-202ENST00000380968 PTMSP20962 102 aa9.1□□□□□ -0.95
MLH3-202ENST00000380968 ANP32CO43423 234 aa9.08□□□□□ -0.96
MLH3-202ENST00000380968 ITGAEP38570 1179 aa9.08□□□□□ -0.96
MLH3-202ENST00000380968 MIER1Q8N108 512 aa9.06□□□□□ -0.96
MLH3-202ENST00000380968 PNNQ9H307 717 aaKnown RBP9.06□□□□□ -0.96
MLH3-202ENST00000380968 AMER1Q5JTC6 1135 aaPredicted RBP9.04□□□□□ -0.96
MLH3-202ENST00000380968 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
MLH3-202ENST00000380968 PLEKHG5O94827 1062 aa9.03□□□□□ -0.96
MLH3-202ENST00000380968 PDIA4P13667 645 aaKnown RBP9.03□□□□□ -0.96
MLH3-202ENST00000380968 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
MLH3-202ENST00000380968 CANXP27824 592 aaKnown RBP8.99□□□□□ -0.97
MLH3-202ENST00000380968 ARXQ96QS3 562 aa8.99□□□□□ -0.97
MLH3-202ENST00000380968 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
MLH3-202ENST00000380968 HNRNPUL2Q1KMD3 747 aaKnown RBP8.97□□□□□ -0.97
MLH3-202ENST00000380968 APPP05067 770 aa8.96□□□□□ -0.98
MLH3-202ENST00000380968 USP35Q9P2H5 1018 aa8.95□□□□□ -0.98
MLH3-202ENST00000380968 LAS1LQ9Y4W2 734 aaKnown RBP8.95□□□□□ -0.98
MLH3-202ENST00000380968 TAF7LQ5H9L4 462 aa8.94□□□□□ -0.98
MLH3-202ENST00000380968 FANCIQ9NVI1 1328 aa8.94□□□□□ -0.98
MLH3-202ENST00000380968 TNNT3P45378 269 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms