RNA–Protein interactions for RNA: ENST00000380909.8

TRABD-202, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TRABD, Length 2,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-202ENST00000380909 NISCHQ9Y2I1 1504 aa37.51■■■■□ 3.6
TRABD-202ENST00000380909 CCDC180Q9P1Z9 1646 aa32.93■■■□□ 2.86
TRABD-202ENST00000380909 ABCC9O60706 1549 aa31.71■■■□□ 2.67
TRABD-202ENST00000380909 ZCCHC6Q5VYS8 1495 aaKnown RBP31.37■■■□□ 2.61
TRABD-202ENST00000380909 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
TRABD-202ENST00000380909 DCAF1Q9Y4B6 1507 aa30.99■■■□□ 2.55
TRABD-202ENST00000380909 MYO15BQ96JP2 1530 aa30.84■■■□□ 2.53
TRABD-202ENST00000380909 NACADO15069 1562 aa30.82■■■□□ 2.52
TRABD-202ENST00000380909 RB1CC1Q8TDY2 1594 aa30.69■■■□□ 2.5
TRABD-202ENST00000380909 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
TRABD-202ENST00000380909 SHROOM4Q9ULL8 1493 aa30.22■■■□□ 2.43
TRABD-202ENST00000380909 UNC13AQ9UPW8 1703 aa30.07■■■□□ 2.4
TRABD-202ENST00000380909 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
TRABD-202ENST00000380909 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
TRABD-202ENST00000380909 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
TRABD-202ENST00000380909 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
TRABD-202ENST00000380909 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
TRABD-202ENST00000380909 MROH2BQ7Z745 1585 aa28.97■■■□□ 2.23
TRABD-202ENST00000380909 EIF4G1Q04637 1599 aaKnown RBP28.95■■■□□ 2.22
TRABD-202ENST00000380909 SMARCA4P51532 1647 aa28.93■■■□□ 2.22
TRABD-202ENST00000380909 RSF1Q96T23 1441 aaPredicted RBP28.89■■■□□ 2.22
TRABD-202ENST00000380909 WIZO95785 1651 aa28.69■■■□□ 2.18
TRABD-202ENST00000380909 CC2D2AQ9P2K1 1620 aa28.67■■■□□ 2.18
TRABD-202ENST00000380909 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
TRABD-202ENST00000380909 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
TRABD-202ENST00000380909 SMARCA2P51531 1590 aa28.56■■■□□ 2.16
TRABD-202ENST00000380909 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
TRABD-202ENST00000380909 HRCP23327 699 aa28.52■■■□□ 2.16
TRABD-202ENST00000380909 NCAPD3P42695 1498 aa28.48■■■□□ 2.15
TRABD-202ENST00000380909 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
TRABD-202ENST00000380909 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
TRABD-202ENST00000380909 TOP2AP11388 1531 aaKnown RBP28.35■■■□□ 2.13
TRABD-202ENST00000380909 CCDC88BA6NC98 1476 aa28.09■■■□□ 2.09
TRABD-202ENST00000380909 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
TRABD-202ENST00000380909 PELP1Q8IZL8 1130 aaKnown RBP27.89■■■□□ 2.05
TRABD-202ENST00000380909 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
TRABD-202ENST00000380909 CFTRP13569 1480 aa27.69■■■□□ 2.02
TRABD-202ENST00000380909 NESP48681 1621 aa27.67■■■□□ 2.02
TRABD-202ENST00000380909 LAMC3Q9Y6N6 1575 aa27.58■■■□□ 2.01
TRABD-202ENST00000380909 PCGF6Q9BYE7 350 aa27.56■■■□□ 2
TRABD-202ENST00000380909 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
TRABD-202ENST00000380909 PRDM2Q13029 1718 aa27.45■■□□□ 1.99
TRABD-202ENST00000380909 PDS5BQ9NTI5 1447 aa27.39■■□□□ 1.98
TRABD-202ENST00000380909 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
TRABD-202ENST00000380909 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
TRABD-202ENST00000380909 KIF21AQ7Z4S6 1674 aa27.29■■□□□ 1.96
TRABD-202ENST00000380909 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.96
TRABD-202ENST00000380909 TRIM41Q8WV44 630 aa27.25■■□□□ 1.95
TRABD-202ENST00000380909 ERCC6Q03468 1493 aa27.22■■□□□ 1.95
TRABD-202ENST00000380909 WRNQ14191 1432 aaPredicted RBP eCLIP27.19■■□□□ 1.94
TRABD-202ENST00000380909 LOC105371045A0A1W2PR82 267 aa27.15■■□□□ 1.94
TRABD-202ENST00000380909 CUX1P39880 1505 aa27.11■■□□□ 1.93
TRABD-202ENST00000380909 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
TRABD-202ENST00000380909 URB2Q14146 1524 aaKnown RBP27.09■■□□□ 1.93
TRABD-202ENST00000380909 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
TRABD-202ENST00000380909 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
TRABD-202ENST00000380909 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
TRABD-202ENST00000380909 DNMBPQ6XZF7 1577 aa27.02■■□□□ 1.92
TRABD-202ENST00000380909 BIVM-ERCC5R4GMW8 1640 aa27■■□□□ 1.91
TRABD-202ENST00000380909 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
TRABD-202ENST00000380909 TRIM26Q12899 539 aaPredicted RBP26.99■■□□□ 1.91
TRABD-202ENST00000380909 FAM9AQ8IZU1 332 aaPredicted RBP26.99■■□□□ 1.91
TRABD-202ENST00000380909 ZEB1P37275 1124 aaPredicted RBP26.98■■□□□ 1.91
TRABD-202ENST00000380909 WDR62O43379 1518 aa26.95■■□□□ 1.9
TRABD-202ENST00000380909 MYT1Q01538 1121 aa26.95■■□□□ 1.9
TRABD-202ENST00000380909 FGD5Q6ZNL6 1462 aa26.9■■□□□ 1.9
TRABD-202ENST00000380909 POLA1P09884 1462 aaPredicted RBP26.86■■□□□ 1.89
TRABD-202ENST00000380909 SCAF1Q9H7N4 1312 aaKnown RBP26.86■■□□□ 1.89
TRABD-202ENST00000380909 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
TRABD-202ENST00000380909 SOGA1O94964 1423 aa26.78■■□□□ 1.88
TRABD-202ENST00000380909 CUX2O14529 1486 aa26.77■■□□□ 1.88
TRABD-202ENST00000380909 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
TRABD-202ENST00000380909 TARBP1Q13395 1621 aaKnown RBP26.67■■□□□ 1.86
TRABD-202ENST00000380909 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
TRABD-202ENST00000380909 RUSC2Q8N2Y8 1516 aa26.64■■□□□ 1.86
TRABD-202ENST00000380909 ABCA10Q8WWZ4 1543 aa26.64■■□□□ 1.86
TRABD-202ENST00000380909 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
TRABD-202ENST00000380909 WDR97A6NE52 1622 aa26.59■■□□□ 1.85
TRABD-202ENST00000380909 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
TRABD-202ENST00000380909 KIF27Q86VH2 1401 aa26.55■■□□□ 1.84
TRABD-202ENST00000380909 AQRO60306 1485 aaKnown RBP eCLIP26.51■■□□□ 1.835e-7■■■■■ 29.5
TRABD-202ENST00000380909 GAPVD1Q14C86 1478 aa26.47■■□□□ 1.83
TRABD-202ENST00000380909 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
TRABD-202ENST00000380909 EEA1Q15075 1411 aa26.46■■□□□ 1.83
TRABD-202ENST00000380909 CSRNP3Q8WYN3 585 aa26.44■■□□□ 1.82
TRABD-202ENST00000380909 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
TRABD-202ENST00000380909 IGF1RP08069 1367 aa26.42■■□□□ 1.82
TRABD-202ENST00000380909 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
TRABD-202ENST00000380909 PBRM1Q86U86 1689 aa26.32■■□□□ 1.8
TRABD-202ENST00000380909 ERICH3Q5RHP9 1530 aa26.31■■□□□ 1.8
TRABD-202ENST00000380909 ACIN1Q9UKV3 1341 aaKnown RBP26.3■■□□□ 1.8
TRABD-202ENST00000380909 CARMIL1Q5VZK9 1371 aa26.25■■□□□ 1.79
TRABD-202ENST00000380909 PRXQ9BXM0 1461 aa26.24■■□□□ 1.79
TRABD-202ENST00000380909 SNAPC4Q5SXM2 1469 aa26.22■■□□□ 1.79
TRABD-202ENST00000380909 CUL7Q14999 1698 aa26.19■■□□□ 1.78
TRABD-202ENST00000380909 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
TRABD-202ENST00000380909 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
TRABD-202ENST00000380909 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
TRABD-202ENST00000380909 KIF21BO75037 1637 aa26.16■■□□□ 1.78
TRABD-202ENST00000380909 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms