RNA–Protein interactions for RNA: ENST00000380851.9

IDH3B-202, Transcript of isocitrate dehydrogenase 3 (NAD(+)) beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene IDH3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3B-202ENST00000380851 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
IDH3B-202ENST00000380851 CCDC180Q9P1Z9 1646 aa34.88■■■■□ 3.17
IDH3B-202ENST00000380851 ABCC9O60706 1549 aa34.35■■■■□ 3.09
IDH3B-202ENST00000380851 RB1CC1Q8TDY2 1594 aa32.99■■■□□ 2.87
IDH3B-202ENST00000380851 NACADO15069 1562 aa32.88■■■□□ 2.85
IDH3B-202ENST00000380851 MYO15BQ96JP2 1530 aa32.62■■■□□ 2.81
IDH3B-202ENST00000380851 DCAF8L2P0C7V8 631 aa32.59■■■□□ 2.81
IDH3B-202ENST00000380851 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
IDH3B-202ENST00000380851 DCAF1Q9Y4B6 1507 aa32.31■■■□□ 2.76
IDH3B-202ENST00000380851 UNC13AQ9UPW8 1703 aa32.16■■■□□ 2.74
IDH3B-202ENST00000380851 PABPN1Q86U42 306 aaKnown RBP eCLIP31.99■■■□□ 2.71
IDH3B-202ENST00000380851 BICRAQ9NZM4 1560 aa31.94■■■□□ 2.7
IDH3B-202ENST00000380851 DNAJC5BQ9UF47 199 aa31.82■■■□□ 2.68
IDH3B-202ENST00000380851 SHROOM4Q9ULL8 1493 aa31.74■■■□□ 2.67
IDH3B-202ENST00000380851 SCRIBQ14160 1630 aa31.68■■■□□ 2.66
IDH3B-202ENST00000380851 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
IDH3B-202ENST00000380851 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
IDH3B-202ENST00000380851 CECR2Q9BXF3 1484 aa30.96■■■□□ 2.55
IDH3B-202ENST00000380851 NCAPD3P42695 1498 aa30.33■■■□□ 2.45
IDH3B-202ENST00000380851 SMARCA4P51532 1647 aa30.32■■■□□ 2.44
IDH3B-202ENST00000380851 BAZ1AQ9NRL2 1556 aaPredicted RBP30.27■■■□□ 2.44
IDH3B-202ENST00000380851 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
IDH3B-202ENST00000380851 SMARCA2P51531 1590 aa30.24■■■□□ 2.43
IDH3B-202ENST00000380851 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
IDH3B-202ENST00000380851 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
IDH3B-202ENST00000380851 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
IDH3B-202ENST00000380851 MROH2BQ7Z745 1585 aa29.98■■■□□ 2.39
IDH3B-202ENST00000380851 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
IDH3B-202ENST00000380851 WIZO95785 1651 aa29.63■■■□□ 2.33
IDH3B-202ENST00000380851 NESP48681 1621 aa29.6■■■□□ 2.33
IDH3B-202ENST00000380851 LAMC3Q9Y6N6 1575 aa29.6■■■□□ 2.33
IDH3B-202ENST00000380851 CUX2O14529 1486 aa29.58■■■□□ 2.33
IDH3B-202ENST00000380851 RSF1Q96T23 1441 aaPredicted RBP29.53■■■□□ 2.32
IDH3B-202ENST00000380851 PDS5BQ9NTI5 1447 aa29.41■■■□□ 2.3
IDH3B-202ENST00000380851 CADPSQ9ULU8 1353 aa29.4■■■□□ 2.3
IDH3B-202ENST00000380851 TOP2AP11388 1531 aaKnown RBP29.36■■■□□ 2.29
IDH3B-202ENST00000380851 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
IDH3B-202ENST00000380851 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
IDH3B-202ENST00000380851 CFTRP13569 1480 aa29.16■■■□□ 2.26
IDH3B-202ENST00000380851 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
IDH3B-202ENST00000380851 CEP164Q9UPV0 1460 aa29.07■■■□□ 2.24
IDH3B-202ENST00000380851 FANCD2Q9BXW9 1451 aa29.05■■■□□ 2.24
IDH3B-202ENST00000380851 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
IDH3B-202ENST00000380851 WDR62O43379 1518 aa29.03■■■□□ 2.24
IDH3B-202ENST00000380851 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
IDH3B-202ENST00000380851 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
IDH3B-202ENST00000380851 URB2Q14146 1524 aaKnown RBP28.75■■■□□ 2.19
IDH3B-202ENST00000380851 ABCC8Q09428 1581 aa28.6■■■□□ 2.17
IDH3B-202ENST00000380851 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
IDH3B-202ENST00000380851 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
IDH3B-202ENST00000380851 IFT140Q96RY7 1462 aa28.49■■■□□ 2.15
IDH3B-202ENST00000380851 SUPT5HO00267 1087 aaKnown RBP28.41■■■□□ 2.14
IDH3B-202ENST00000380851 ZNF608Q9ULD9 1512 aaPredicted RBP28.31■■■□□ 2.12
IDH3B-202ENST00000380851 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
IDH3B-202ENST00000380851 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
IDH3B-202ENST00000380851 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
IDH3B-202ENST00000380851 EIF4G3O43432 1585 aaKnown RBP28.23■■■□□ 2.11
IDH3B-202ENST00000380851 CUX1P39880 1505 aa28.16■■■□□ 2.1
IDH3B-202ENST00000380851 SOGA1O94964 1423 aa28.15■■■□□ 2.1
IDH3B-202ENST00000380851 FGD5Q6ZNL6 1462 aa28.14■■■□□ 2.09
IDH3B-202ENST00000380851 WDR97A6NE52 1622 aa28.12■■■□□ 2.09
IDH3B-202ENST00000380851 AQRO60306 1485 aaKnown RBP eCLIP28.1■■■□□ 2.098e-7■■■■■ 26.8
IDH3B-202ENST00000380851 RAD54L2Q9Y4B4 1467 aa28.1■■■□□ 2.09
IDH3B-202ENST00000380851 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
IDH3B-202ENST00000380851 CHD1O14646 1710 aa27.92■■■□□ 2.06
IDH3B-202ENST00000380851 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
IDH3B-202ENST00000380851 GRIN2BQ13224 1484 aa27.89■■■□□ 2.06
IDH3B-202ENST00000380851 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.05
IDH3B-202ENST00000380851 WRNQ14191 1432 aaPredicted RBP eCLIP27.88■■■□□ 2.05
IDH3B-202ENST00000380851 SNAPC4Q5SXM2 1469 aa27.87■■■□□ 2.05
IDH3B-202ENST00000380851 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
IDH3B-202ENST00000380851 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
IDH3B-202ENST00000380851 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
IDH3B-202ENST00000380851 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.04
IDH3B-202ENST00000380851 FBLN2P98095 1184 aa27.81■■■□□ 2.04
IDH3B-202ENST00000380851 ABCA5Q8WWZ7 1642 aa27.8■■■□□ 2.04
IDH3B-202ENST00000380851 RIMBP3CA6NJZ7 1639 aa27.79■■■□□ 2.04
IDH3B-202ENST00000380851 RIMBP3BA6NNM3 1639 aa27.79■■■□□ 2.04
IDH3B-202ENST00000380851 RIMBP3Q9UFD9 1639 aa27.79■■■□□ 2.04
IDH3B-202ENST00000380851 SYNJ1O43426 1573 aa27.78■■■□□ 2.04
IDH3B-202ENST00000380851 PBRM1Q86U86 1689 aa27.78■■■□□ 2.04
IDH3B-202ENST00000380851 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
IDH3B-202ENST00000380851 SYNJ2O15056 1496 aa27.76■■■□□ 2.03
IDH3B-202ENST00000380851 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
IDH3B-202ENST00000380851 CLASP1Q7Z460 1538 aa27.65■■■□□ 2.02
IDH3B-202ENST00000380851 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
IDH3B-202ENST00000380851 ADAMTS12P58397 1594 aa27.56■■■□□ 2
IDH3B-202ENST00000380851 GRIN2AQ12879 1464 aa27.52■■■□□ 2
IDH3B-202ENST00000380851 FHAD1B1AJZ9 1412 aa27.51■■□□□ 1.99
IDH3B-202ENST00000380851 ARAP1Q96P48 1450 aa27.51■■□□□ 1.99
IDH3B-202ENST00000380851 CYB5RLQ6IPT4 315 aa27.48■■□□□ 1.99
IDH3B-202ENST00000380851 NUP160Q12769 1436 aa27.43■■□□□ 1.98
IDH3B-202ENST00000380851 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
IDH3B-202ENST00000380851 KIF27Q86VH2 1401 aa27.34■■□□□ 1.97
IDH3B-202ENST00000380851 SHROOM2Q13796 1616 aa27.27■■□□□ 1.96
IDH3B-202ENST00000380851 IGF1RP08069 1367 aa27.24■■□□□ 1.95
IDH3B-202ENST00000380851 CUL7Q14999 1698 aa27.24■■□□□ 1.95
IDH3B-202ENST00000380851 RUSC2Q8N2Y8 1516 aa27.16■■□□□ 1.94
IDH3B-202ENST00000380851 ERCC6L2Q5T890 1561 aa27.15■■□□□ 1.94
IDH3B-202ENST00000380851 JPH4Q96JJ6 628 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms