RNA–Protein interactions for RNA: ENST00000380817.7

SBF1-202, Transcript of SET binding factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBF1, Length 8,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-202ENST00000380817 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
SBF1-202ENST00000380817 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
SBF1-202ENST00000380817 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
SBF1-202ENST00000380817 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
SBF1-202ENST00000380817 MYT1Q01538 1121 aa21.99■■□□□ 1.11
SBF1-202ENST00000380817 APLP2Q06481 763 aa21.99■■□□□ 1.11
SBF1-202ENST00000380817 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
SBF1-202ENST00000380817 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
SBF1-202ENST00000380817 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
SBF1-202ENST00000380817 ERICH6Q7L0X2 663 aa21.81■■□□□ 1.08
SBF1-202ENST00000380817 CENPBP07199 599 aaPredicted RBP21.74■■□□□ 1.07
SBF1-202ENST00000380817 ZEB1P37275 1124 aaPredicted RBP21.66■■□□□ 1.06
SBF1-202ENST00000380817 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
SBF1-202ENST00000380817 NEFLP07196 543 aa21.31■■□□□ 1
SBF1-202ENST00000380817 YTHDC1Q96MU7 727 aaKnown RBP21.18■□□□□ 0.98
SBF1-202ENST00000380817 TTBK1Q5TCY1 1321 aaPredicted RBP21.17■□□□□ 0.98
SBF1-202ENST00000380817 PCGF6Q9BYE7 350 aa21.08■□□□□ 0.96
SBF1-202ENST00000380817 DAXXQ9UER7 740 aaPredicted RBP20.9■□□□□ 0.94
SBF1-202ENST00000380817 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
SBF1-202ENST00000380817 RANGAP1P46060 587 aaPredicted RBP20.68■□□□□ 0.9
SBF1-202ENST00000380817 UBTFP17480 764 aaKnown RBP20.61■□□□□ 0.89
SBF1-202ENST00000380817 ATP1B4Q9UN42 357 aaPredicted RBP20.61■□□□□ 0.89
SBF1-202ENST00000380817 TRIM26Q12899 539 aaPredicted RBP20.44■□□□□ 0.86
SBF1-202ENST00000380817 RTL5Q5HYW3 569 aaPredicted RBP20.38■□□□□ 0.85
SBF1-202ENST00000380817 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
SBF1-202ENST00000380817 PPARGC1BQ86YN6 1023 aaKnown RBP20.15■□□□□ 0.82
SBF1-202ENST00000380817 HRCP23327 699 aa20.12■□□□□ 0.81
SBF1-202ENST00000380817 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
SBF1-202ENST00000380817 MYT1LQ9UL68 1186 aa19.98■□□□□ 0.79
SBF1-202ENST00000380817 POLR3GLQ9BT43 218 aa19.96■□□□□ 0.79
SBF1-202ENST00000380817 CNGB1Q14028 1251 aaPredicted RBP19.92■□□□□ 0.78
SBF1-202ENST00000380817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
SBF1-202ENST00000380817 HNRNPUL2Q1KMD3 747 aaKnown RBP19.86■□□□□ 0.77
SBF1-202ENST00000380817 ZBTB47Q9UFB7 747 aaPredicted RBP19.86■□□□□ 0.77
SBF1-202ENST00000380817 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.77
SBF1-202ENST00000380817 CDK11AQ9UQ88 783 aaPredicted RBP19.79■□□□□ 0.76
SBF1-202ENST00000380817 ITGAEP38570 1179 aa19.78■□□□□ 0.76
SBF1-202ENST00000380817 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
SBF1-202ENST00000380817 ANP32CO43423 234 aa19.64■□□□□ 0.73
SBF1-202ENST00000380817 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
SBF1-202ENST00000380817 ANP32BQ92688 251 aaKnown RBP19.61■□□□□ 0.73
SBF1-202ENST00000380817 GLIPR1L2Q4G1C9 344 aa19.59■□□□□ 0.73
SBF1-202ENST00000380817 ANP32AP39687 249 aaKnown RBP19.58■□□□□ 0.72
SBF1-202ENST00000380817 NEFMP07197 916 aa19.57■□□□□ 0.72
SBF1-202ENST00000380817 CANXP27824 592 aaKnown RBP19.47■□□□□ 0.71
SBF1-202ENST00000380817 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
SBF1-202ENST00000380817 TRIM52Q96A61 297 aa19.41■□□□□ 0.7
SBF1-202ENST00000380817 UPF2Q9HAU5 1272 aaKnown RBP19.36■□□□□ 0.69
SBF1-202ENST00000380817 GTF3C3Q9Y5Q9 886 aa19.35■□□□□ 0.69
SBF1-202ENST00000380817 LOC105371045A0A1W2PR82 267 aa19.32■□□□□ 0.68
SBF1-202ENST00000380817 BCANQ96GW7 911 aa19.29■□□□□ 0.68
SBF1-202ENST00000380817 HSP90AA1P07900 732 aaKnown RBP19.25■□□□□ 0.67
SBF1-202ENST00000380817 NEUROD1Q13562 356 aa19.24■□□□□ 0.67
SBF1-202ENST00000380817 BCL11AQ9H165 835 aa19.21■□□□□ 0.67
SBF1-202ENST00000380817 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
SBF1-202ENST00000380817 ACIN1Q9UKV3 1341 aaKnown RBP19.12■□□□□ 0.65
SBF1-202ENST00000380817 EIF5BO60841 1220 aaKnown RBP19.11■□□□□ 0.65
SBF1-202ENST00000380817 ZNF326Q5BKZ1 582 aaKnown RBP19.08■□□□□ 0.65
SBF1-202ENST00000380817 ANP32EQ9BTT0 268 aa19.08■□□□□ 0.64
SBF1-202ENST00000380817 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.07■□□□□ 0.64
SBF1-202ENST00000380817 CDK11BP21127 795 aaKnown RBP18.96■□□□□ 0.63
SBF1-202ENST00000380817 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
SBF1-202ENST00000380817 TONSLQ96HA7 1378 aa18.95■□□□□ 0.62
SBF1-202ENST00000380817 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
SBF1-202ENST00000380817 DDRGK1Q96HY6 314 aa18.86■□□□□ 0.61
SBF1-202ENST00000380817 BECN1Q14457 450 aa18.85■□□□□ 0.61
SBF1-202ENST00000380817 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
SBF1-202ENST00000380817 FKBP8Q14318 412 aa18.83■□□□□ 0.6
SBF1-202ENST00000380817 CCDC136Q96JN2 1154 aa18.83■□□□□ 0.6
SBF1-202ENST00000380817 ESF1Q9H501 851 aaKnown RBP18.83■□□□□ 0.6
SBF1-202ENST00000380817 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
SBF1-202ENST00000380817 GOLGA6L22H0YM25 854 aa18.8■□□□□ 0.6
SBF1-202ENST00000380817 TRIM44Q96DX7 344 aaPredicted RBP18.8■□□□□ 0.6
SBF1-202ENST00000380817 HNRNPUQ00839 825 aaKnown RBP eCLIP18.79■□□□□ 0.6
SBF1-202ENST00000380817 NCLP19338 710 aaKnown RBP18.77■□□□□ 0.6
SBF1-202ENST00000380817 TMC1Q8TDI8 760 aa18.77■□□□□ 0.59
SBF1-202ENST00000380817 WDR43Q15061 677 aaKnown RBP eCLIP18.74■□□□□ 0.597e-6■■□□□ 11.7
SBF1-202ENST00000380817 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
SBF1-202ENST00000380817 STAG3Q9UJ98 1225 aa18.68■□□□□ 0.58
SBF1-202ENST00000380817 FBLN2P98095 1184 aa18.66■□□□□ 0.58
SBF1-202ENST00000380817 ZRSR1Q15695 479 aaKnown RBP18.63■□□□□ 0.57
SBF1-202ENST00000380817 ERICH6BQ5W0A0 696 aa18.63■□□□□ 0.57
SBF1-202ENST00000380817 NBR1Q14596 966 aa18.61■□□□□ 0.57
SBF1-202ENST00000380817 CASC1Q6TDU7 716 aa18.61■□□□□ 0.57
SBF1-202ENST00000380817 FAM9BQ8IZU0 186 aa18.6■□□□□ 0.57
SBF1-202ENST00000380817 ZNF777Q9ULD5 760 aaPredicted RBP18.56■□□□□ 0.56
SBF1-202ENST00000380817 ARXQ96QS3 562 aa18.56■□□□□ 0.56
SBF1-202ENST00000380817 PPM1GO15355 546 aaPredicted RBP18.54■□□□□ 0.56
SBF1-202ENST00000380817 GOLGA6L6A8MZA4 724 aa18.53■□□□□ 0.56
SBF1-202ENST00000380817 NRDCO43847 1150 aa18.53■□□□□ 0.56
SBF1-202ENST00000380817 CHMP4BQ9H444 224 aaKnown RBP18.53■□□□□ 0.56
SBF1-202ENST00000380817 DDX10Q13206 875 aaKnown RBP18.51■□□□□ 0.55
SBF1-202ENST00000380817 MRS2Q9HD23 443 aa18.51■□□□□ 0.55
SBF1-202ENST00000380817 ABCC9O60706 1549 aa18.5■□□□□ 0.55
SBF1-202ENST00000380817 NPM1P06748 294 aaKnown RBP eCLIP18.5■□□□□ 0.55
SBF1-202ENST00000380817 PTMAP06454 111 aaKnown RBP18.49■□□□□ 0.55
SBF1-202ENST00000380817 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
SBF1-202ENST00000380817 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
SBF1-202ENST00000380817 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
SBF1-202ENST00000380817 CHGAP10645 457 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms