RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 NISCHQ9Y2I1 1504 aa27.99■■■□□ 2.07
EXOSC9-202ENST00000379663 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
EXOSC9-202ENST00000379663 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.57
EXOSC9-202ENST00000379663 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
EXOSC9-202ENST00000379663 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
EXOSC9-202ENST00000379663 ABCC9O60706 1549 aa23.26■■□□□ 1.31
EXOSC9-202ENST00000379663 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
EXOSC9-202ENST00000379663 MYO15BQ96JP2 1530 aa23.06■■□□□ 1.28
EXOSC9-202ENST00000379663 NACADO15069 1562 aa22.92■■□□□ 1.26
EXOSC9-202ENST00000379663 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
EXOSC9-202ENST00000379663 RB1CC1Q8TDY2 1594 aa22.77■■□□□ 1.24
EXOSC9-202ENST00000379663 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
EXOSC9-202ENST00000379663 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
EXOSC9-202ENST00000379663 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
EXOSC9-202ENST00000379663 SENP3Q9H4L4 574 aaPredicted RBP22.38■■□□□ 1.17
EXOSC9-202ENST00000379663 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
EXOSC9-202ENST00000379663 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
EXOSC9-202ENST00000379663 PABPN1Q86U42 306 aaKnown RBP eCLIP21.76■■□□□ 1.07
EXOSC9-202ENST00000379663 CECR2Q9BXF3 1484 aa21.7■■□□□ 1.06
EXOSC9-202ENST00000379663 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
EXOSC9-202ENST00000379663 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
EXOSC9-202ENST00000379663 MROH2BQ7Z745 1585 aa21.58■■□□□ 1.05
EXOSC9-202ENST00000379663 RSF1Q96T23 1441 aaPredicted RBP21.56■■□□□ 1.04
EXOSC9-202ENST00000379663 WIZO95785 1651 aa21.45■■□□□ 1.02
EXOSC9-202ENST00000379663 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
EXOSC9-202ENST00000379663 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
EXOSC9-202ENST00000379663 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
EXOSC9-202ENST00000379663 SMARCA2P51531 1590 aa21.27■□□□□ 0.99
EXOSC9-202ENST00000379663 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
EXOSC9-202ENST00000379663 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
EXOSC9-202ENST00000379663 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
EXOSC9-202ENST00000379663 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
EXOSC9-202ENST00000379663 NCAPD3P42695 1498 aa21.1■□□□□ 0.97
EXOSC9-202ENST00000379663 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
EXOSC9-202ENST00000379663 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
EXOSC9-202ENST00000379663 FOXD1Q16676 465 aa20.88■□□□□ 0.93
EXOSC9-202ENST00000379663 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
EXOSC9-202ENST00000379663 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
EXOSC9-202ENST00000379663 CFTRP13569 1480 aa20.58■□□□□ 0.88
EXOSC9-202ENST00000379663 LAMC3Q9Y6N6 1575 aa20.49■□□□□ 0.87
EXOSC9-202ENST00000379663 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
EXOSC9-202ENST00000379663 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
EXOSC9-202ENST00000379663 NESP48681 1621 aa20.38■□□□□ 0.85
EXOSC9-202ENST00000379663 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
EXOSC9-202ENST00000379663 SYNJ1O43426 1573 aa20.3■□□□□ 0.84
EXOSC9-202ENST00000379663 KIF21AQ7Z4S6 1674 aa20.3■□□□□ 0.84
EXOSC9-202ENST00000379663 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
EXOSC9-202ENST00000379663 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
EXOSC9-202ENST00000379663 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
EXOSC9-202ENST00000379663 PDS5BQ9NTI5 1447 aa20.21■□□□□ 0.83
EXOSC9-202ENST00000379663 CUX1P39880 1505 aa20.21■□□□□ 0.83
EXOSC9-202ENST00000379663 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
EXOSC9-202ENST00000379663 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
EXOSC9-202ENST00000379663 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
EXOSC9-202ENST00000379663 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
EXOSC9-202ENST00000379663 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
EXOSC9-202ENST00000379663 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
EXOSC9-202ENST00000379663 MRC2Q9UBG0 1479 aa20.01■□□□□ 0.79
EXOSC9-202ENST00000379663 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
EXOSC9-202ENST00000379663 WDR62O43379 1518 aa19.99■□□□□ 0.79
EXOSC9-202ENST00000379663 WDR97A6NE52 1622 aa19.97■□□□□ 0.79
EXOSC9-202ENST00000379663 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
EXOSC9-202ENST00000379663 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
EXOSC9-202ENST00000379663 SOGA1O94964 1423 aa19.92■□□□□ 0.78
EXOSC9-202ENST00000379663 EEA1Q15075 1411 aa19.91■□□□□ 0.78
EXOSC9-202ENST00000379663 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
EXOSC9-202ENST00000379663 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
EXOSC9-202ENST00000379663 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
EXOSC9-202ENST00000379663 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
EXOSC9-202ENST00000379663 RAD54L2Q9Y4B4 1467 aa19.82■□□□□ 0.76
EXOSC9-202ENST00000379663 CUX2O14529 1486 aa19.8■□□□□ 0.76
EXOSC9-202ENST00000379663 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
EXOSC9-202ENST00000379663 KIF27Q86VH2 1401 aa19.79■□□□□ 0.76
EXOSC9-202ENST00000379663 KIF21BO75037 1637 aa19.76■□□□□ 0.75
EXOSC9-202ENST00000379663 FAM9AQ8IZU1 332 aaPredicted RBP19.75■□□□□ 0.75
EXOSC9-202ENST00000379663 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
EXOSC9-202ENST00000379663 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
EXOSC9-202ENST00000379663 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
EXOSC9-202ENST00000379663 CUL7Q14999 1698 aa19.67■□□□□ 0.74
EXOSC9-202ENST00000379663 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
EXOSC9-202ENST00000379663 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
EXOSC9-202ENST00000379663 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
EXOSC9-202ENST00000379663 GAPVD1Q14C86 1478 aa19.62■□□□□ 0.73
EXOSC9-202ENST00000379663 GOLGA3Q08378 1498 aa19.61■□□□□ 0.73
EXOSC9-202ENST00000379663 IGF1RP08069 1367 aa19.61■□□□□ 0.73
EXOSC9-202ENST00000379663 LOC105371045A0A1W2PR82 267 aa19.61■□□□□ 0.73
EXOSC9-202ENST00000379663 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
EXOSC9-202ENST00000379663 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
EXOSC9-202ENST00000379663 RAPGEF2Q9Y4G8 1499 aa19.57■□□□□ 0.72
EXOSC9-202ENST00000379663 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.723e-6■■■□□ 17.8
EXOSC9-202ENST00000379663 MSH5O43196 834 aa19.53■□□□□ 0.72
EXOSC9-202ENST00000379663 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
EXOSC9-202ENST00000379663 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
EXOSC9-202ENST00000379663 GRIN2BQ13224 1484 aa19.52■□□□□ 0.72
EXOSC9-202ENST00000379663 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
EXOSC9-202ENST00000379663 TNIKQ9UKE5 1360 aa19.47■□□□□ 0.71
EXOSC9-202ENST00000379663 PIAS4Q8N2W9 510 aaPredicted RBP19.47■□□□□ 0.71
EXOSC9-202ENST00000379663 CTTNBP2Q8WZ74 1663 aa19.47■□□□□ 0.71
EXOSC9-202ENST00000379663 ADRA2BP18089 450 aa19.44■□□□□ 0.7
EXOSC9-202ENST00000379663 MAGI1Q96QZ7 1491 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms