RNA–Protein interactions for RNA: ENST00000379509.7

LCLAT1-203, Transcript of lysocardiolipin acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCLAT1, Length 4,888 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-203ENST00000379509 NISCHQ9Y2I1 1504 aa10.89□□□□□ -0.67
LCLAT1-203ENST00000379509 DCAF8L2P0C7V8 631 aa10.47□□□□□ -0.73
LCLAT1-203ENST00000379509 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
LCLAT1-203ENST00000379509 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
LCLAT1-203ENST00000379509 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
LCLAT1-203ENST00000379509 ABCC9O60706 1549 aa9.48□□□□□ -0.89
LCLAT1-203ENST00000379509 FAM9AQ8IZU1 332 aaPredicted RBP9.37□□□□□ -0.91
LCLAT1-203ENST00000379509 PABPN1Q86U42 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
LCLAT1-203ENST00000379509 TTBK1Q5TCY1 1321 aaPredicted RBP9.21□□□□□ -0.94
LCLAT1-203ENST00000379509 LOC105371045A0A1W2PR82 267 aa9.16□□□□□ -0.94
LCLAT1-203ENST00000379509 RANGAP1P46060 587 aaPredicted RBP9.15□□□□□ -0.94
LCLAT1-203ENST00000379509 PPARGC1BQ86YN6 1023 aaKnown RBP9.14□□□□□ -0.95
LCLAT1-203ENST00000379509 ZCCHC6Q5VYS8 1495 aaKnown RBP9.05□□□□□ -0.96
LCLAT1-203ENST00000379509 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
LCLAT1-203ENST00000379509 CHIC1Q5VXU3 224 aa9.04□□□□□ -0.96
LCLAT1-203ENST00000379509 TRIM41Q8WV44 630 aa8.98□□□□□ -0.97
LCLAT1-203ENST00000379509 PCGF6Q9BYE7 350 aa8.94□□□□□ -0.98
LCLAT1-203ENST00000379509 HRCP23327 699 aa8.93□□□□□ -0.98
LCLAT1-203ENST00000379509 CCDC180Q9P1Z9 1646 aa8.89□□□□□ -0.99
LCLAT1-203ENST00000379509 CECR2Q9BXF3 1484 aa8.87□□□□□ -0.99
LCLAT1-203ENST00000379509 MYO15BQ96JP2 1530 aa8.84□□□□□ -0.99
LCLAT1-203ENST00000379509 UBTFP17480 764 aaKnown RBP8.76□□□□□ -1.01
LCLAT1-203ENST00000379509 RSF1Q96T23 1441 aaPredicted RBP8.72□□□□□ -1.01
LCLAT1-203ENST00000379509 ATP1B4Q9UN42 357 aaPredicted RBP8.71□□□□□ -1.02
LCLAT1-203ENST00000379509 DNAJC5BQ9UF47 199 aa8.69□□□□□ -1.02
LCLAT1-203ENST00000379509 MROH2BQ7Z745 1585 aa8.65□□□□□ -1.02
LCLAT1-203ENST00000379509 RB1CC1Q8TDY2 1594 aa8.61□□□□□ -1.03
LCLAT1-203ENST00000379509 ARID3CA6NKF2 412 aa8.6□□□□□ -1.03
LCLAT1-203ENST00000379509 P3H3Q8IVL6 736 aa8.59□□□□□ -1.03
LCLAT1-203ENST00000379509 ITGAEP38570 1179 aa8.59□□□□□ -1.03
LCLAT1-203ENST00000379509 WIZO95785 1651 aa8.57□□□□□ -1.04
LCLAT1-203ENST00000379509 DCAF1Q9Y4B6 1507 aa8.57□□□□□ -1.04
LCLAT1-203ENST00000379509 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
LCLAT1-203ENST00000379509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.53□□□□□ -1.04
LCLAT1-203ENST00000379509 NACADO15069 1562 aa8.52□□□□□ -1.05
LCLAT1-203ENST00000379509 ABCC8Q09428 1581 aa8.51□□□□□ -1.05
LCLAT1-203ENST00000379509 TRIM26Q12899 539 aaPredicted RBP8.51□□□□□ -1.05
LCLAT1-203ENST00000379509 FBLN2P98095 1184 aa8.47□□□□□ -1.05
LCLAT1-203ENST00000379509 SOGA1O94964 1423 aa8.45□□□□□ -1.06
LCLAT1-203ENST00000379509 APLP2Q06481 763 aa8.44□□□□□ -1.06
LCLAT1-203ENST00000379509 SCAF1Q9H7N4 1312 aaKnown RBP8.44□□□□□ -1.06
LCLAT1-203ENST00000379509 PELP1Q8IZL8 1130 aaKnown RBP8.43□□□□□ -1.06
LCLAT1-203ENST00000379509 RUSC2Q8N2Y8 1516 aa8.43□□□□□ -1.06
LCLAT1-203ENST00000379509 CCDC88BA6NC98 1476 aa8.43□□□□□ -1.06
LCLAT1-203ENST00000379509 CSRNP3Q8WYN3 585 aa8.43□□□□□ -1.06
LCLAT1-203ENST00000379509 CCER1Q8TC90 406 aaPredicted RBP8.42□□□□□ -1.06
LCLAT1-203ENST00000379509 ZEB1P37275 1124 aaPredicted RBP8.37□□□□□ -1.07
LCLAT1-203ENST00000379509 BAZ1BQ9UIG0 1483 aaKnown RBP8.37□□□□□ -1.07
LCLAT1-203ENST00000379509 BAZ1AQ9NRL2 1556 aaPredicted RBP8.34□□□□□ -1.07
LCLAT1-203ENST00000379509 BICRAQ9NZM4 1560 aa8.31□□□□□ -1.08
LCLAT1-203ENST00000379509 CNGB1Q14028 1251 aaPredicted RBP8.31□□□□□ -1.08
LCLAT1-203ENST00000379509 ATAD2BQ9ULI0 1458 aa8.29□□□□□ -1.08
LCLAT1-203ENST00000379509 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
LCLAT1-203ENST00000379509 SMARCA4P51532 1647 aa8.29□□□□□ -1.08
LCLAT1-203ENST00000379509 UNC13AQ9UPW8 1703 aa8.28□□□□□ -1.08
LCLAT1-203ENST00000379509 NESP48681 1621 aa8.28□□□□□ -1.08
LCLAT1-203ENST00000379509 FAM50AQ14320 339 aaKnown RBP8.27□□□□□ -1.09
LCLAT1-203ENST00000379509 TDRD9Q8NDG6 1382 aaKnown RBP8.25□□□□□ -1.09
LCLAT1-203ENST00000379509 YTHDC1Q96MU7 727 aaKnown RBP8.25□□□□□ -1.09
LCLAT1-203ENST00000379509 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
LCLAT1-203ENST00000379509 ACIN1Q9UKV3 1341 aaKnown RBP8.22□□□□□ -1.09
LCLAT1-203ENST00000379509 SMARCA2P51531 1590 aa8.21□□□□□ -1.1
LCLAT1-203ENST00000379509 KANK4Q5T7N3 995 aaPredicted RBP8.2□□□□□ -1.1
LCLAT1-203ENST00000379509 SENP3Q9H4L4 574 aaPredicted RBP8.2□□□□□ -1.1
LCLAT1-203ENST00000379509 HIRIP3Q9BW71 556 aaPredicted RBP8.19□□□□□ -1.1
LCLAT1-203ENST00000379509 CEP162Q5TB80 1403 aa8.19□□□□□ -1.1
LCLAT1-203ENST00000379509 CHIC2Q9UKJ5 165 aa8.19□□□□□ -1.1
LCLAT1-203ENST00000379509 EIF4G1Q04637 1599 aaKnown RBP8.19□□□□□ -1.1
LCLAT1-203ENST00000379509 TOP2AP11388 1531 aaKnown RBP8.18□□□□□ -1.1
LCLAT1-203ENST00000379509 GTF3C3Q9Y5Q9 886 aa8.18□□□□□ -1.1
LCLAT1-203ENST00000379509 ZNF777Q9ULD5 760 aaPredicted RBP8.16□□□□□ -1.1
LCLAT1-203ENST00000379509 RAD54L2Q9Y4B4 1467 aa8.15□□□□□ -1.1
LCLAT1-203ENST00000379509 RAPGEF2Q9Y4G8 1499 aa8.15□□□□□ -1.1
LCLAT1-203ENST00000379509 CUX2O14529 1486 aa8.15□□□□□ -1.11
LCLAT1-203ENST00000379509 CLIP1P30622 1438 aa8.14□□□□□ -1.11
LCLAT1-203ENST00000379509 DIEXFQ68CQ4 756 aaKnown RBP8.13□□□□□ -1.11
LCLAT1-203ENST00000379509 CC2D2AQ9P2K1 1620 aa8.11□□□□□ -1.11
LCLAT1-203ENST00000379509 SENP3-EIF4A1A0A087X0R7 540 aa8.11□□□□□ -1.11
LCLAT1-203ENST00000379509 CENPBP07199 599 aaPredicted RBP8.11□□□□□ -1.11
LCLAT1-203ENST00000379509 MYT1LQ9UL68 1186 aa8.11□□□□□ -1.11
LCLAT1-203ENST00000379509 SYNJ1O43426 1573 aa8.1□□□□□ -1.11
LCLAT1-203ENST00000379509 CADPSQ9ULU8 1353 aa8.1□□□□□ -1.11
LCLAT1-203ENST00000379509 POLR3GLQ9BT43 218 aa8.1□□□□□ -1.11
LCLAT1-203ENST00000379509 CHMP7Q8WUX9 453 aaPredicted RBP8.09□□□□□ -1.11
LCLAT1-203ENST00000379509 KCNH8Q96L42 1107 aa8.07□□□□□ -1.12
LCLAT1-203ENST00000379509 ERCC6Q03468 1493 aa8.06□□□□□ -1.12
LCLAT1-203ENST00000379509 ZNF326Q5BKZ1 582 aaKnown RBP8.06□□□□□ -1.12
LCLAT1-203ENST00000379509 TRIM52Q96A61 297 aa8.06□□□□□ -1.12
LCLAT1-203ENST00000379509 RRP7BPQ9NSQ0 103 aa8.06□□□□□ -1.12
LCLAT1-203ENST00000379509 CARMIL1Q5VZK9 1371 aa8.05□□□□□ -1.12
LCLAT1-203ENST00000379509 MYT1Q01538 1121 aa8.05□□□□□ -1.12
LCLAT1-203ENST00000379509 AQRO60306 1485 aaKnown RBP eCLIP8.05□□□□□ -1.12
LCLAT1-203ENST00000379509 FANCD2Q9BXW9 1451 aa8.04□□□□□ -1.12
LCLAT1-203ENST00000379509 PLPPR3Q6T4P5 718 aa8.04□□□□□ -1.12
LCLAT1-203ENST00000379509 KIF27Q86VH2 1401 aa8.03□□□□□ -1.12
LCLAT1-203ENST00000379509 FOXD1Q16676 465 aa8.03□□□□□ -1.12
LCLAT1-203ENST00000379509 SIN3AQ96ST3 1273 aa8.03□□□□□ -1.12
LCLAT1-203ENST00000379509 GOLGA3Q08378 1498 aa8.03□□□□□ -1.12
LCLAT1-203ENST00000379509 PDS5BQ9NTI5 1447 aa8.02□□□□□ -1.13
LCLAT1-203ENST00000379509 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms