RNA–Protein interactions for RNA: ENST00000379349.5

PRDX4-203, Transcript of peroxiredoxin 4, humanhuman

TSL 3

Gene PRDX4, Length 815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX4-203ENST00000379349 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
PRDX4-203ENST00000379349 ABCC9O60706 1549 aa27.76■■■□□ 2.03
PRDX4-203ENST00000379349 CCDC180Q9P1Z9 1646 aa27.68■■■□□ 2.02
PRDX4-203ENST00000379349 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
PRDX4-203ENST00000379349 NACADO15069 1562 aa26.16■■□□□ 1.78
PRDX4-203ENST00000379349 DNAJC5BQ9UF47 199 aa26.1■■□□□ 1.77
PRDX4-203ENST00000379349 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
PRDX4-203ENST00000379349 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
PRDX4-203ENST00000379349 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
PRDX4-203ENST00000379349 MYO15BQ96JP2 1530 aa25.76■■□□□ 1.71
PRDX4-203ENST00000379349 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.69
PRDX4-203ENST00000379349 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
PRDX4-203ENST00000379349 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
PRDX4-203ENST00000379349 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
PRDX4-203ENST00000379349 SCRIBQ14160 1630 aa25.21■■□□□ 1.63
PRDX4-203ENST00000379349 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
PRDX4-203ENST00000379349 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
PRDX4-203ENST00000379349 CECR2Q9BXF3 1484 aa25■■□□□ 1.59
PRDX4-203ENST00000379349 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
PRDX4-203ENST00000379349 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
PRDX4-203ENST00000379349 SMARCA4P51532 1647 aa24.03■■□□□ 1.44
PRDX4-203ENST00000379349 DNAJC5Q9H3Z4 198 aa24.03■■□□□ 1.44
PRDX4-203ENST00000379349 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
PRDX4-203ENST00000379349 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
PRDX4-203ENST00000379349 CUX2O14529 1486 aa23.96■■□□□ 1.43
PRDX4-203ENST00000379349 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
PRDX4-203ENST00000379349 BAZ1AQ9NRL2 1556 aaPredicted RBP23.88■■□□□ 1.41
PRDX4-203ENST00000379349 BAZ1BQ9UIG0 1483 aaKnown RBP23.82■■□□□ 1.4
PRDX4-203ENST00000379349 NESP48681 1621 aa23.82■■□□□ 1.4
PRDX4-203ENST00000379349 PEG3Q9GZU2 1588 aa23.8■■□□□ 1.4
PRDX4-203ENST00000379349 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
PRDX4-203ENST00000379349 THOC2Q8NI27 1593 aaKnown RBP23.64■■□□□ 1.37
PRDX4-203ENST00000379349 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
PRDX4-203ENST00000379349 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
PRDX4-203ENST00000379349 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
PRDX4-203ENST00000379349 WIZO95785 1651 aa23.43■■□□□ 1.34
PRDX4-203ENST00000379349 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.33
PRDX4-203ENST00000379349 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
PRDX4-203ENST00000379349 WDR62O43379 1518 aa23.27■■□□□ 1.32
PRDX4-203ENST00000379349 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
PRDX4-203ENST00000379349 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
PRDX4-203ENST00000379349 RSF1Q96T23 1441 aaPredicted RBP23.15■■□□□ 1.3
PRDX4-203ENST00000379349 TOP2AP11388 1531 aaKnown RBP23.12■■□□□ 1.29
PRDX4-203ENST00000379349 CFTRP13569 1480 aa23.11■■□□□ 1.29
PRDX4-203ENST00000379349 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
PRDX4-203ENST00000379349 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
PRDX4-203ENST00000379349 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
PRDX4-203ENST00000379349 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
PRDX4-203ENST00000379349 OSCARQ8IYS5 282 aa22.78■■□□□ 1.24
PRDX4-203ENST00000379349 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
PRDX4-203ENST00000379349 TOPBP1Q92547 1522 aa22.71■■□□□ 1.23
PRDX4-203ENST00000379349 ZNF608Q9ULD9 1512 aaPredicted RBP22.71■■□□□ 1.23
PRDX4-203ENST00000379349 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
PRDX4-203ENST00000379349 DNMBPQ6XZF7 1577 aa22.62■■□□□ 1.21
PRDX4-203ENST00000379349 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
PRDX4-203ENST00000379349 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
PRDX4-203ENST00000379349 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
PRDX4-203ENST00000379349 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
PRDX4-203ENST00000379349 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
PRDX4-203ENST00000379349 ARHGEF11O15085 1522 aa22.5■■□□□ 1.19
PRDX4-203ENST00000379349 CHD1O14646 1710 aa22.47■■□□□ 1.19
PRDX4-203ENST00000379349 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
PRDX4-203ENST00000379349 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.19
PRDX4-203ENST00000379349 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
PRDX4-203ENST00000379349 SOGA1O94964 1423 aa22.32■■□□□ 1.16
PRDX4-203ENST00000379349 FGD5Q6ZNL6 1462 aa22.31■■□□□ 1.16
PRDX4-203ENST00000379349 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
PRDX4-203ENST00000379349 FBLN2P98095 1184 aa22.29■■□□□ 1.16
PRDX4-203ENST00000379349 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
PRDX4-203ENST00000379349 CUX1P39880 1505 aa22.28■■□□□ 1.16
PRDX4-203ENST00000379349 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
PRDX4-203ENST00000379349 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
PRDX4-203ENST00000379349 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
PRDX4-203ENST00000379349 CLASP1Q7Z460 1538 aa22.2■■□□□ 1.14
PRDX4-203ENST00000379349 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
PRDX4-203ENST00000379349 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
PRDX4-203ENST00000379349 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
PRDX4-203ENST00000379349 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
PRDX4-203ENST00000379349 SYNJ2O15056 1496 aa22.1■■□□□ 1.13
PRDX4-203ENST00000379349 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
PRDX4-203ENST00000379349 GAPVD1Q14C86 1478 aa22.07■■□□□ 1.12
PRDX4-203ENST00000379349 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
PRDX4-203ENST00000379349 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
PRDX4-203ENST00000379349 TRHP20396 242 aaPredicted RBP22.04■■□□□ 1.12
PRDX4-203ENST00000379349 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
PRDX4-203ENST00000379349 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
PRDX4-203ENST00000379349 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
PRDX4-203ENST00000379349 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
PRDX4-203ENST00000379349 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
PRDX4-203ENST00000379349 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
PRDX4-203ENST00000379349 CEP170Q5SW79 1584 aa21.84■■□□□ 1.09
PRDX4-203ENST00000379349 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
PRDX4-203ENST00000379349 NUP160Q12769 1436 aa21.83■■□□□ 1.09
PRDX4-203ENST00000379349 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
PRDX4-203ENST00000379349 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
PRDX4-203ENST00000379349 SHROOM2Q13796 1616 aa21.77■■□□□ 1.07
PRDX4-203ENST00000379349 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
PRDX4-203ENST00000379349 PRG4Q92954 1404 aaPredicted RBP21.59■■□□□ 1.05
PRDX4-203ENST00000379349 KIF13AQ9H1H9 1805 aa21.55■■□□□ 1.04
PRDX4-203ENST00000379349 JPH4Q96JJ6 628 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms