RNA–Protein interactions for RNA: ENST00000379328.7

GATA3-202, Transcript of GATA binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GATA3, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA3-202ENST00000379328 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
GATA3-202ENST00000379328 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
GATA3-202ENST00000379328 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
GATA3-202ENST00000379328 HRCP23327 699 aa25.15■■□□□ 1.62
GATA3-202ENST00000379328 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
GATA3-202ENST00000379328 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
GATA3-202ENST00000379328 PCGF6Q9BYE7 350 aa24.98■■□□□ 1.59
GATA3-202ENST00000379328 PPARGC1BQ86YN6 1023 aaKnown RBP24.9■■□□□ 1.58
GATA3-202ENST00000379328 MYO15BQ96JP2 1530 aa24.82■■□□□ 1.56
GATA3-202ENST00000379328 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
GATA3-202ENST00000379328 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
GATA3-202ENST00000379328 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
GATA3-202ENST00000379328 ABCC9O60706 1549 aa24.16■■□□□ 1.46
GATA3-202ENST00000379328 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
GATA3-202ENST00000379328 TRIM26Q12899 539 aaPredicted RBP24.03■■□□□ 1.44
GATA3-202ENST00000379328 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
GATA3-202ENST00000379328 SCAF1Q9H7N4 1312 aaKnown RBP23.75■■□□□ 1.39
GATA3-202ENST00000379328 PELP1Q8IZL8 1130 aaKnown RBP23.75■■□□□ 1.39
GATA3-202ENST00000379328 EHMT2Q96KQ7 1210 aa23.73■■□□□ 1.39
GATA3-202ENST00000379328 ZEB1P37275 1124 aaPredicted RBP23.65■■□□□ 1.38
GATA3-202ENST00000379328 FAM9AQ8IZU1 332 aaPredicted RBP23.65■■□□□ 1.38
GATA3-202ENST00000379328 TRIM41Q8WV44 630 aa23.47■■□□□ 1.35
GATA3-202ENST00000379328 NACADO15069 1562 aa23.41■■□□□ 1.34
GATA3-202ENST00000379328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
GATA3-202ENST00000379328 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
GATA3-202ENST00000379328 RB1CC1Q8TDY2 1594 aa23.22■■□□□ 1.31
GATA3-202ENST00000379328 ACIN1Q9UKV3 1341 aaKnown RBP23.19■■□□□ 1.3
GATA3-202ENST00000379328 CCER1Q8TC90 406 aaPredicted RBP23.16■■□□□ 1.3
GATA3-202ENST00000379328 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
GATA3-202ENST00000379328 RSF1Q96T23 1441 aaPredicted RBP23.14■■□□□ 1.29
GATA3-202ENST00000379328 GTF3C3Q9Y5Q9 886 aa23.1■■□□□ 1.29
GATA3-202ENST00000379328 PABPN1Q86U42 306 aaKnown RBP eCLIP23.09■■□□□ 1.29
GATA3-202ENST00000379328 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.28
GATA3-202ENST00000379328 DIEXFQ68CQ4 756 aaKnown RBP23■■□□□ 1.27
GATA3-202ENST00000379328 MROH2BQ7Z745 1585 aa22.95■■□□□ 1.26
GATA3-202ENST00000379328 CENPBP07199 599 aaPredicted RBP22.95■■□□□ 1.26
GATA3-202ENST00000379328 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
GATA3-202ENST00000379328 YTHDC1Q96MU7 727 aaKnown RBP22.82■■□□□ 1.24
GATA3-202ENST00000379328 WIZO95785 1651 aa22.81■■□□□ 1.24
GATA3-202ENST00000379328 MYT1Q01538 1121 aa22.66■■□□□ 1.22
GATA3-202ENST00000379328 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.21
GATA3-202ENST00000379328 BAZ1AQ9NRL2 1556 aaPredicted RBP22.62■■□□□ 1.21
GATA3-202ENST00000379328 ZNF316A6NFI3 1004 aaPredicted RBP22.54■■□□□ 1.2
GATA3-202ENST00000379328 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
GATA3-202ENST00000379328 MIER1Q8N108 512 aa22.46■■□□□ 1.19
GATA3-202ENST00000379328 HNRNPUL2Q1KMD3 747 aaKnown RBP22.37■■□□□ 1.17
GATA3-202ENST00000379328 UBTFP17480 764 aaKnown RBP22.37■■□□□ 1.17
GATA3-202ENST00000379328 CEP162Q5TB80 1403 aa22.33■■□□□ 1.16
GATA3-202ENST00000379328 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
GATA3-202ENST00000379328 CCDC88BA6NC98 1476 aa22.31■■□□□ 1.16
GATA3-202ENST00000379328 ABCC8Q09428 1581 aa22.24■■□□□ 1.15
GATA3-202ENST00000379328 SMARCA2P51531 1590 aa22.22■■□□□ 1.15
GATA3-202ENST00000379328 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
GATA3-202ENST00000379328 SOGA1O94964 1423 aa22.2■■□□□ 1.14
GATA3-202ENST00000379328 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
GATA3-202ENST00000379328 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
GATA3-202ENST00000379328 RANGAP1P46060 587 aaPredicted RBP22.12■■□□□ 1.13
GATA3-202ENST00000379328 TNIKQ9UKE5 1360 aa22.11■■□□□ 1.13
GATA3-202ENST00000379328 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
GATA3-202ENST00000379328 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
GATA3-202ENST00000379328 EIF4G1Q04637 1599 aaKnown RBP22.07■■□□□ 1.12
GATA3-202ENST00000379328 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
GATA3-202ENST00000379328 SUPT16HQ9Y5B9 1047 aaKnown RBP21.96■■□□□ 1.11
GATA3-202ENST00000379328 APLP2Q06481 763 aa21.95■■□□□ 1.1
GATA3-202ENST00000379328 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
GATA3-202ENST00000379328 TSHZ2Q9NRE2 1034 aa21.8■■□□□ 1.08
GATA3-202ENST00000379328 EEA1Q15075 1411 aa21.79■■□□□ 1.08
GATA3-202ENST00000379328 CLIP1P30622 1438 aa21.78■■□□□ 1.08
GATA3-202ENST00000379328 BCANQ96GW7 911 aa21.78■■□□□ 1.08
GATA3-202ENST00000379328 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
GATA3-202ENST00000379328 KCNH8Q96L42 1107 aa21.71■■□□□ 1.07
GATA3-202ENST00000379328 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
GATA3-202ENST00000379328 ANP32EQ9BTT0 268 aa21.69■■□□□ 1.06
GATA3-202ENST00000379328 VPS8Q8N3P4 1428 aa21.65■■□□□ 1.06
GATA3-202ENST00000379328 ITGAEP38570 1179 aa21.64■■□□□ 1.06
GATA3-202ENST00000379328 CLSPNQ9HAW4 1339 aa21.64■■□□□ 1.05
GATA3-202ENST00000379328 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
GATA3-202ENST00000379328 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
GATA3-202ENST00000379328 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
GATA3-202ENST00000379328 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
GATA3-202ENST00000379328 RAPGEF2Q9Y4G8 1499 aa21.55■■□□□ 1.04
GATA3-202ENST00000379328 FKBP8Q14318 412 aa21.54■■□□□ 1.04
GATA3-202ENST00000379328 KANK4Q5T7N3 995 aaPredicted RBP21.54■■□□□ 1.04
GATA3-202ENST00000379328 BCL11AQ9H165 835 aa21.53■■□□□ 1.04
GATA3-202ENST00000379328 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
GATA3-202ENST00000379328 KIF21BO75037 1637 aa21.45■■□□□ 1.02
GATA3-202ENST00000379328 DDX10Q13206 875 aaKnown RBP21.44■■□□□ 1.02
GATA3-202ENST00000379328 CFTRP13569 1480 aa21.42■■□□□ 1.02
GATA3-202ENST00000379328 HIRIP3Q9BW71 556 aaPredicted RBP21.38■■□□□ 1.01
GATA3-202ENST00000379328 CUX1P39880 1505 aa21.38■■□□□ 1.01
GATA3-202ENST00000379328 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
GATA3-202ENST00000379328 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
GATA3-202ENST00000379328 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
GATA3-202ENST00000379328 NEFLP07196 543 aa21.34■■□□□ 1.01
GATA3-202ENST00000379328 NESP48681 1621 aa21.34■■□□□ 1.01
GATA3-202ENST00000379328 RBM19Q9Y4C8 960 aaKnown RBP21.33■■□□□ 1.01
GATA3-202ENST00000379328 SIN3AQ96ST3 1273 aa21.28■■□□□ 1
GATA3-202ENST00000379328 BIVM-ERCC5R4GMW8 1640 aa21.24■□□□□ 0.99
GATA3-202ENST00000379328 CCNB3Q8WWL7 1395 aa21.23■□□□□ 0.99
GATA3-202ENST00000379328 ARAP1Q96P48 1450 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms