RNA–Protein interactions for RNA: ENST00000379299.6

TMEM230-208, Transcript of transmembrane protein 230, humanhuman

APPRIS P1 TSL 1 (best)

Gene TMEM230, Length 1,642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM230-208ENST00000379299 NISCHQ9Y2I1 1504 aa43.99■■■■■ 4.63
TMEM230-208ENST00000379299 CCDC180Q9P1Z9 1646 aa39.01■■■■□ 3.83
TMEM230-208ENST00000379299 ABCC9O60706 1549 aa37.94■■■■□ 3.66
TMEM230-208ENST00000379299 ZCCHC6Q5VYS8 1495 aaKnown RBP36.68■■■■□ 3.46
TMEM230-208ENST00000379299 DCAF8L2P0C7V8 631 aa36.66■■■■□ 3.46
TMEM230-208ENST00000379299 NACADO15069 1562 aa36.65■■■■□ 3.46
TMEM230-208ENST00000379299 RB1CC1Q8TDY2 1594 aa36.62■■■■□ 3.45
TMEM230-208ENST00000379299 MYO15BQ96JP2 1530 aa36.52■■■■□ 3.44
TMEM230-208ENST00000379299 DCAF1Q9Y4B6 1507 aa36.43■■■■□ 3.42
TMEM230-208ENST00000379299 UNC13AQ9UPW8 1703 aa35.72■■■■□ 3.31
TMEM230-208ENST00000379299 SCRIBQ14160 1630 aa35.57■■■■□ 3.28
TMEM230-208ENST00000379299 PABPN1Q86U42 306 aaKnown RBP eCLIP35.49■■■■□ 3.27
TMEM230-208ENST00000379299 BICRAQ9NZM4 1560 aa35.47■■■■□ 3.27
TMEM230-208ENST00000379299 SHROOM4Q9ULL8 1493 aa35.19■■■■□ 3.22
TMEM230-208ENST00000379299 DNAJC5BQ9UF47 199 aa34.61■■■■□ 3.13
TMEM230-208ENST00000379299 EIF4G1Q04637 1599 aaKnown RBP34.53■■■■□ 3.12
TMEM230-208ENST00000379299 CC2D2AQ9P2K1 1620 aa34.32■■■■□ 3.08
TMEM230-208ENST00000379299 CECR2Q9BXF3 1484 aa34.22■■■■□ 3.07
TMEM230-208ENST00000379299 BAZ1AQ9NRL2 1556 aaPredicted RBP34.09■■■■□ 3.05
TMEM230-208ENST00000379299 SMARCA4P51532 1647 aa34.07■■■■□ 3.04
TMEM230-208ENST00000379299 MROH2BQ7Z745 1585 aa33.89■■■■□ 3.02
TMEM230-208ENST00000379299 ATAD2BQ9ULI0 1458 aa33.84■■■■□ 3.01
TMEM230-208ENST00000379299 SMARCA2P51531 1590 aa33.83■■■■□ 3.01
TMEM230-208ENST00000379299 NCAPD3P42695 1498 aa33.82■■■■□ 3
TMEM230-208ENST00000379299 PEG3Q9GZU2 1588 aa33.75■■■□□ 2.99
TMEM230-208ENST00000379299 HMGXB3Q12766 1538 aa33.66■■■□□ 2.98
TMEM230-208ENST00000379299 RSF1Q96T23 1441 aaPredicted RBP33.59■■■□□ 2.97
TMEM230-208ENST00000379299 BAZ1BQ9UIG0 1483 aaKnown RBP33.58■■■□□ 2.97
TMEM230-208ENST00000379299 WIZO95785 1651 aa33.52■■■□□ 2.96
TMEM230-208ENST00000379299 TOP2AP11388 1531 aaKnown RBP33.2■■■□□ 2.91
TMEM230-208ENST00000379299 SUPT5HO00267 1087 aaKnown RBP32.9■■■□□ 2.86
TMEM230-208ENST00000379299 NESP48681 1621 aa32.88■■■□□ 2.85
TMEM230-208ENST00000379299 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
TMEM230-208ENST00000379299 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
TMEM230-208ENST00000379299 CCDC88BA6NC98 1476 aa32.81■■■□□ 2.84
TMEM230-208ENST00000379299 ERCC6Q03468 1493 aa32.7■■■□□ 2.83
TMEM230-208ENST00000379299 CFTRP13569 1480 aa32.68■■■□□ 2.82
TMEM230-208ENST00000379299 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
TMEM230-208ENST00000379299 KIF21AQ7Z4S6 1674 aa32.48■■■□□ 2.79
TMEM230-208ENST00000379299 FANCD2Q9BXW9 1451 aa32.45■■■□□ 2.78
TMEM230-208ENST00000379299 PRDM2Q13029 1718 aa32.41■■■□□ 2.78
TMEM230-208ENST00000379299 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.77
TMEM230-208ENST00000379299 THOC2Q8NI27 1593 aaKnown RBP32.34■■■□□ 2.77
TMEM230-208ENST00000379299 CUX2O14529 1486 aa32.29■■■□□ 2.76
TMEM230-208ENST00000379299 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
TMEM230-208ENST00000379299 WDR62O43379 1518 aa32.17■■■□□ 2.74
TMEM230-208ENST00000379299 URB2Q14146 1524 aaKnown RBP32.09■■■□□ 2.73
TMEM230-208ENST00000379299 ABCC8Q09428 1581 aa32.01■■■□□ 2.71
TMEM230-208ENST00000379299 TOPBP1Q92547 1522 aa31.95■■■□□ 2.7
TMEM230-208ENST00000379299 DNMBPQ6XZF7 1577 aa31.93■■■□□ 2.7
TMEM230-208ENST00000379299 CUX1P39880 1505 aa31.78■■■□□ 2.68
TMEM230-208ENST00000379299 IFT140Q96RY7 1462 aa31.71■■■□□ 2.67
TMEM230-208ENST00000379299 POLA1P09884 1462 aaPredicted RBP31.69■■■□□ 2.66
TMEM230-208ENST00000379299 WRNQ14191 1432 aaPredicted RBP eCLIP31.68■■■□□ 2.66
TMEM230-208ENST00000379299 FGD5Q6ZNL6 1462 aa31.64■■■□□ 2.66
TMEM230-208ENST00000379299 SOGA1O94964 1423 aa31.58■■■□□ 2.65
TMEM230-208ENST00000379299 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
TMEM230-208ENST00000379299 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.64
TMEM230-208ENST00000379299 BIVM-ERCC5R4GMW8 1640 aa31.56■■■□□ 2.64
TMEM230-208ENST00000379299 SYNJ1O43426 1573 aa31.55■■■□□ 2.64
TMEM230-208ENST00000379299 RAD54L2Q9Y4B4 1467 aa31.53■■■□□ 2.64
TMEM230-208ENST00000379299 ZNF608Q9ULD9 1512 aaPredicted RBP31.51■■■□□ 2.63
TMEM230-208ENST00000379299 EIF4G3O43432 1585 aaKnown RBP31.4■■■□□ 2.62
TMEM230-208ENST00000379299 AQRO60306 1485 aaKnown RBP eCLIP31.37■■■□□ 2.61
TMEM230-208ENST00000379299 WDR97A6NE52 1622 aa31.37■■■□□ 2.61
TMEM230-208ENST00000379299 ABCA10Q8WWZ4 1543 aa31.37■■■□□ 2.61
TMEM230-208ENST00000379299 TDRD9Q8NDG6 1382 aaKnown RBP31.36■■■□□ 2.61
TMEM230-208ENST00000379299 CHIC1Q5VXU3 224 aa31.23■■■□□ 2.59
TMEM230-208ENST00000379299 GAPVD1Q14C86 1478 aa31.22■■■□□ 2.59
TMEM230-208ENST00000379299 ABCA5Q8WWZ7 1642 aa31.19■■■□□ 2.58
TMEM230-208ENST00000379299 GRIN2BQ13224 1484 aa31.18■■■□□ 2.58
TMEM230-208ENST00000379299 DNAJC5Q9H3Z4 198 aa31.1■■■□□ 2.57
TMEM230-208ENST00000379299 TRIM41Q8WV44 630 aa31.09■■■□□ 2.57
TMEM230-208ENST00000379299 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
TMEM230-208ENST00000379299 SNAPC4Q5SXM2 1469 aa31.09■■■□□ 2.57
TMEM230-208ENST00000379299 MAGI1Q96QZ7 1491 aaPredicted RBP31.09■■■□□ 2.57
TMEM230-208ENST00000379299 OSCARQ8IYS5 282 aa31.02■■■□□ 2.56
TMEM230-208ENST00000379299 KIF27Q86VH2 1401 aa31.02■■■□□ 2.56
TMEM230-208ENST00000379299 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
TMEM230-208ENST00000379299 FBLN2P98095 1184 aa30.97■■■□□ 2.55
TMEM230-208ENST00000379299 SYNJ2O15056 1496 aa30.95■■■□□ 2.55
TMEM230-208ENST00000379299 CHD1O14646 1710 aa30.94■■■□□ 2.54
TMEM230-208ENST00000379299 CHMP7Q8WUX9 453 aaPredicted RBP30.94■■■□□ 2.54
TMEM230-208ENST00000379299 ADAMTS12P58397 1594 aa30.88■■■□□ 2.53
TMEM230-208ENST00000379299 FHAD1B1AJZ9 1412 aa30.88■■■□□ 2.53
TMEM230-208ENST00000379299 IGF1RP08069 1367 aa30.86■■■□□ 2.53
TMEM230-208ENST00000379299 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
TMEM230-208ENST00000379299 CUL7Q14999 1698 aa30.75■■■□□ 2.51
TMEM230-208ENST00000379299 RUSC2Q8N2Y8 1516 aa30.74■■■□□ 2.51
TMEM230-208ENST00000379299 CARMIL1Q5VZK9 1371 aa30.68■■■□□ 2.5
TMEM230-208ENST00000379299 NUP160Q12769 1436 aa30.64■■■□□ 2.49
TMEM230-208ENST00000379299 CLASP1Q7Z460 1538 aa30.63■■■□□ 2.49
TMEM230-208ENST00000379299 EEA1Q15075 1411 aa30.59■■■□□ 2.49
TMEM230-208ENST00000379299 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
TMEM230-208ENST00000379299 RAPGEF2Q9Y4G8 1499 aa30.52■■■□□ 2.48
TMEM230-208ENST00000379299 CSRNP3Q8WYN3 585 aa30.51■■■□□ 2.47
TMEM230-208ENST00000379299 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
TMEM230-208ENST00000379299 PRXQ9BXM0 1461 aa30.46■■■□□ 2.47
TMEM230-208ENST00000379299 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
TMEM230-208ENST00000379299 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms