RNA–Protein interactions for RNA: ENST00000379129.7

PAX6-207, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-207ENST00000379129 NISCHQ9Y2I1 1504 aa23.9■■□□□ 1.42
PAX6-207ENST00000379129 HRCP23327 699 aa21.28■■□□□ 1
PAX6-207ENST00000379129 PPARGC1BQ86YN6 1023 aaKnown RBP20.97■□□□□ 0.95
PAX6-207ENST00000379129 PCGF6Q9BYE7 350 aa20.82■□□□□ 0.92
PAX6-207ENST00000379129 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
PAX6-207ENST00000379129 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
PAX6-207ENST00000379129 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
PAX6-207ENST00000379129 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
PAX6-207ENST00000379129 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
PAX6-207ENST00000379129 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
PAX6-207ENST00000379129 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
PAX6-207ENST00000379129 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
PAX6-207ENST00000379129 DCAF1Q9Y4B6 1507 aa20.04■□□□□ 0.8
PAX6-207ENST00000379129 LOC105371045A0A1W2PR82 267 aa20.01■□□□□ 0.79
PAX6-207ENST00000379129 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
PAX6-207ENST00000379129 MYT1Q01538 1121 aa19.91■□□□□ 0.78
PAX6-207ENST00000379129 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
PAX6-207ENST00000379129 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
PAX6-207ENST00000379129 NEUROD1Q13562 356 aa19.69■□□□□ 0.74
PAX6-207ENST00000379129 GTF3C3Q9Y5Q9 886 aa19.59■□□□□ 0.73
PAX6-207ENST00000379129 CENPBP07199 599 aaPredicted RBP19.36■□□□□ 0.69
PAX6-207ENST00000379129 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
PAX6-207ENST00000379129 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
PAX6-207ENST00000379129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
PAX6-207ENST00000379129 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
PAX6-207ENST00000379129 FAM9AQ8IZU1 332 aaPredicted RBP19.16■□□□□ 0.66
PAX6-207ENST00000379129 CCER1Q8TC90 406 aaPredicted RBP19.14■□□□□ 0.65
PAX6-207ENST00000379129 ABCC9O60706 1549 aa19.13■□□□□ 0.65
PAX6-207ENST00000379129 YTHDC1Q96MU7 727 aaKnown RBP19.06■□□□□ 0.64
PAX6-207ENST00000379129 TRIM41Q8WV44 630 aa19.02■□□□□ 0.64
PAX6-207ENST00000379129 NACADO15069 1562 aa18.94■□□□□ 0.62
PAX6-207ENST00000379129 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
PAX6-207ENST00000379129 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
PAX6-207ENST00000379129 SLC24A1O60721 1099 aa18.81■□□□□ 0.6
PAX6-207ENST00000379129 ZNF316A6NFI3 1004 aaPredicted RBP18.8■□□□□ 0.6
PAX6-207ENST00000379129 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
PAX6-207ENST00000379129 MIER1Q8N108 512 aa18.78■□□□□ 0.6
PAX6-207ENST00000379129 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
PAX6-207ENST00000379129 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
PAX6-207ENST00000379129 ANP32EQ9BTT0 268 aa18.66■□□□□ 0.58
PAX6-207ENST00000379129 SUPT16HQ9Y5B9 1047 aaKnown RBP18.57■□□□□ 0.56
PAX6-207ENST00000379129 TSHZ2Q9NRE2 1034 aa18.56■□□□□ 0.56
PAX6-207ENST00000379129 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
PAX6-207ENST00000379129 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
PAX6-207ENST00000379129 BAZ1AQ9NRL2 1556 aaPredicted RBP18.44■□□□□ 0.54
PAX6-207ENST00000379129 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
PAX6-207ENST00000379129 WIZO95785 1651 aa18.39■□□□□ 0.53
PAX6-207ENST00000379129 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
PAX6-207ENST00000379129 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.53
PAX6-207ENST00000379129 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
PAX6-207ENST00000379129 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
PAX6-207ENST00000379129 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
PAX6-207ENST00000379129 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
PAX6-207ENST00000379129 BCANQ96GW7 911 aa18.24■□□□□ 0.51
PAX6-207ENST00000379129 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
PAX6-207ENST00000379129 CEP162Q5TB80 1403 aa18.22■□□□□ 0.51
PAX6-207ENST00000379129 PRKCSHP14314 528 aaPredicted RBP18.17■□□□□ 0.5
PAX6-207ENST00000379129 RBM19Q9Y4C8 960 aaKnown RBP18.1■□□□□ 0.49
PAX6-207ENST00000379129 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
PAX6-207ENST00000379129 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
PAX6-207ENST00000379129 FKBP8Q14318 412 aa18.06■□□□□ 0.48
PAX6-207ENST00000379129 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
PAX6-207ENST00000379129 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
PAX6-207ENST00000379129 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
PAX6-207ENST00000379129 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
PAX6-207ENST00000379129 CCDC88BA6NC98 1476 aa18■□□□□ 0.47
PAX6-207ENST00000379129 MSH5O43196 834 aa18■□□□□ 0.47
PAX6-207ENST00000379129 SOGA1O94964 1423 aa17.97■□□□□ 0.47
PAX6-207ENST00000379129 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
PAX6-207ENST00000379129 ITGAEP38570 1179 aa17.96■□□□□ 0.47
PAX6-207ENST00000379129 EEA1Q15075 1411 aa17.87■□□□□ 0.45
PAX6-207ENST00000379129 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
PAX6-207ENST00000379129 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
PAX6-207ENST00000379129 NEFLP07196 543 aa17.82■□□□□ 0.44
PAX6-207ENST00000379129 ERICH6Q7L0X2 663 aa17.78■□□□□ 0.44
PAX6-207ENST00000379129 APLP2Q06481 763 aa17.76■□□□□ 0.43
PAX6-207ENST00000379129 GOLGA3Q08378 1498 aa17.76■□□□□ 0.43
PAX6-207ENST00000379129 TRIM52Q96A61 297 aa17.73■□□□□ 0.43
PAX6-207ENST00000379129 RANGAP1P46060 587 aaPredicted RBP17.72■□□□□ 0.43
PAX6-207ENST00000379129 DEKP35659 375 aaKnown RBP17.7■□□□□ 0.42
PAX6-207ENST00000379129 CLIP1P30622 1438 aa17.7■□□□□ 0.42
PAX6-207ENST00000379129 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
PAX6-207ENST00000379129 DDX10Q13206 875 aaKnown RBP17.69■□□□□ 0.42
PAX6-207ENST00000379129 ANO8Q9HCE9 1232 aaPredicted RBP17.69■□□□□ 0.42
PAX6-207ENST00000379129 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
PAX6-207ENST00000379129 VPS8Q8N3P4 1428 aa17.66■□□□□ 0.42
PAX6-207ENST00000379129 KIF21BO75037 1637 aa17.64■□□□□ 0.42
PAX6-207ENST00000379129 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
PAX6-207ENST00000379129 IRX6P78412 446 aaPredicted RBP17.6■□□□□ 0.41
PAX6-207ENST00000379129 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
PAX6-207ENST00000379129 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
PAX6-207ENST00000379129 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
PAX6-207ENST00000379129 AEBP2Q6ZN18 517 aaPredicted RBP17.58■□□□□ 0.4
PAX6-207ENST00000379129 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
PAX6-207ENST00000379129 MYT1LQ9UL68 1186 aa17.54■□□□□ 0.4
PAX6-207ENST00000379129 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
PAX6-207ENST00000379129 BIVM-ERCC5R4GMW8 1640 aa17.53■□□□□ 0.4
PAX6-207ENST00000379129 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
PAX6-207ENST00000379129 HIRIP3Q9BW71 556 aaPredicted RBP17.53■□□□□ 0.4
PAX6-207ENST00000379129 TOP2BQ02880 1626 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms