RNA–Protein interactions for RNA: ENST00000378879.7

PHF12-203, Transcript of PHD finger protein 12, humanhuman

TSL 5

Gene PHF12, Length 2,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-203ENST00000378879 NISCHQ9Y2I1 1504 aa39.95■■■■□ 3.99
PHF12-203ENST00000378879 SHROOM4Q9ULL8 1493 aa34.83■■■■□ 3.17
PHF12-203ENST00000378879 SUPT5HO00267 1087 aaKnown RBP34.47■■■■□ 3.11
PHF12-203ENST00000378879 HRCP23327 699 aa34.19■■■■□ 3.06
PHF12-203ENST00000378879 MYO15BQ96JP2 1530 aa33.87■■■■□ 3.01
PHF12-203ENST00000378879 ZCCHC6Q5VYS8 1495 aaKnown RBP33.87■■■■□ 3.01
PHF12-203ENST00000378879 CHIC1Q5VXU3 224 aa33.66■■■□□ 2.98
PHF12-203ENST00000378879 PCGF6Q9BYE7 350 aa33.54■■■□□ 2.96
PHF12-203ENST00000378879 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
PHF12-203ENST00000378879 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
PHF12-203ENST00000378879 PPARGC1BQ86YN6 1023 aaKnown RBP33.41■■■□□ 2.94
PHF12-203ENST00000378879 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
PHF12-203ENST00000378879 LOC105371045A0A1W2PR82 267 aa32.77■■■□□ 2.84
PHF12-203ENST00000378879 TRIM26Q12899 539 aaPredicted RBP32.65■■■□□ 2.82
PHF12-203ENST00000378879 PELP1Q8IZL8 1130 aaKnown RBP32.44■■■□□ 2.78
PHF12-203ENST00000378879 ZEB1P37275 1124 aaPredicted RBP32.28■■■□□ 2.76
PHF12-203ENST00000378879 SCAF1Q9H7N4 1312 aaKnown RBP32.14■■■□□ 2.74
PHF12-203ENST00000378879 ABCC9O60706 1549 aa32.05■■■□□ 2.72
PHF12-203ENST00000378879 TRIM41Q8WV44 630 aa31.98■■■□□ 2.71
PHF12-203ENST00000378879 RSF1Q96T23 1441 aaPredicted RBP31.91■■■□□ 2.7
PHF12-203ENST00000378879 FAM9AQ8IZU1 332 aaPredicted RBP31.89■■■□□ 2.69
PHF12-203ENST00000378879 SCRIBQ14160 1630 aa31.78■■■□□ 2.68
PHF12-203ENST00000378879 EHMT2Q96KQ7 1210 aa31.71■■■□□ 2.67
PHF12-203ENST00000378879 RB1CC1Q8TDY2 1594 aa31.65■■■□□ 2.66
PHF12-203ENST00000378879 ACIN1Q9UKV3 1341 aaKnown RBP31.45■■■□□ 2.63
PHF12-203ENST00000378879 NEUROD1Q13562 356 aa31.36■■■□□ 2.61
PHF12-203ENST00000378879 CECR2Q9BXF3 1484 aa31.23■■■□□ 2.59
PHF12-203ENST00000378879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.21■■■□□ 2.59
PHF12-203ENST00000378879 MROH2BQ7Z745 1585 aa31.14■■■□□ 2.58
PHF12-203ENST00000378879 CCER1Q8TC90 406 aaPredicted RBP31.12■■■□□ 2.57
PHF12-203ENST00000378879 GTF3C3Q9Y5Q9 886 aa31.12■■■□□ 2.57
PHF12-203ENST00000378879 MYT1Q01538 1121 aa31.06■■■□□ 2.56
PHF12-203ENST00000378879 DIEXFQ68CQ4 756 aaKnown RBP31.06■■■□□ 2.56
PHF12-203ENST00000378879 CENPBP07199 599 aaPredicted RBP31.02■■■□□ 2.56
PHF12-203ENST00000378879 WIZO95785 1651 aa31■■■□□ 2.55
PHF12-203ENST00000378879 NACADO15069 1562 aa30.96■■■□□ 2.55
PHF12-203ENST00000378879 TTBK1Q5TCY1 1321 aaPredicted RBP30.83■■■□□ 2.53
PHF12-203ENST00000378879 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
PHF12-203ENST00000378879 WRNQ14191 1432 aaPredicted RBP eCLIP30.71■■■□□ 2.519e-6■■■■■ 50.1
PHF12-203ENST00000378879 EIF4G1Q04637 1599 aaKnown RBP30.7■■■□□ 2.51
PHF12-203ENST00000378879 ABCC8Q09428 1581 aa30.59■■■□□ 2.49
PHF12-203ENST00000378879 ZNF316A6NFI3 1004 aaPredicted RBP30.58■■■□□ 2.49
PHF12-203ENST00000378879 CCDC88BA6NC98 1476 aa30.58■■■□□ 2.49
PHF12-203ENST00000378879 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
PHF12-203ENST00000378879 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.47
PHF12-203ENST00000378879 SOGA1O94964 1423 aa30.45■■■□□ 2.47
PHF12-203ENST00000378879 UBTFP17480 764 aaKnown RBP30.45■■■□□ 2.47
PHF12-203ENST00000378879 TNIKQ9UKE5 1360 aa30.44■■■□□ 2.46
PHF12-203ENST00000378879 YTHDC1Q96MU7 727 aaKnown RBP30.39■■■□□ 2.46
PHF12-203ENST00000378879 CSRNP3Q8WYN3 585 aa30.38■■■□□ 2.45
PHF12-203ENST00000378879 SMARCA2P51531 1590 aa30.32■■■□□ 2.44
PHF12-203ENST00000378879 MIER1Q8N108 512 aa30.32■■■□□ 2.44
PHF12-203ENST00000378879 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
PHF12-203ENST00000378879 EEA1Q15075 1411 aa30.27■■■□□ 2.44
PHF12-203ENST00000378879 RUSC2Q8N2Y8 1516 aa30.26■■■□□ 2.43
PHF12-203ENST00000378879 GOLGA3Q08378 1498 aa30.16■■■□□ 2.42
PHF12-203ENST00000378879 HNRNPUL2Q1KMD3 747 aaKnown RBP30.14■■■□□ 2.42
PHF12-203ENST00000378879 APLP2Q06481 763 aa29.92■■■□□ 2.38
PHF12-203ENST00000378879 CEP164Q9UPV0 1460 aa29.92■■■□□ 2.38
PHF12-203ENST00000378879 CLIP1P30622 1438 aa29.91■■■□□ 2.38
PHF12-203ENST00000378879 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
PHF12-203ENST00000378879 RANGAP1P46060 587 aaPredicted RBP29.82■■■□□ 2.36
PHF12-203ENST00000378879 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
PHF12-203ENST00000378879 VPS8Q8N3P4 1428 aa29.79■■■□□ 2.36
PHF12-203ENST00000378879 KIF21BO75037 1637 aa29.77■■■□□ 2.36
PHF12-203ENST00000378879 CLSPNQ9HAW4 1339 aa29.77■■■□□ 2.36
PHF12-203ENST00000378879 SUPT16HQ9Y5B9 1047 aaKnown RBP29.76■■■□□ 2.35
PHF12-203ENST00000378879 SYNJ1O43426 1573 aa29.75■■■□□ 2.35
PHF12-203ENST00000378879 RAPGEF2Q9Y4G8 1499 aa29.66■■■□□ 2.34
PHF12-203ENST00000378879 BAZ1BQ9UIG0 1483 aaKnown RBP29.63■■■□□ 2.33
PHF12-203ENST00000378879 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
PHF12-203ENST00000378879 TSHZ2Q9NRE2 1034 aa29.55■■■□□ 2.32
PHF12-203ENST00000378879 DHX57Q6P158 1386 aaKnown RBP29.55■■■□□ 2.32
PHF12-203ENST00000378879 BICRAQ9NZM4 1560 aa29.51■■■□□ 2.31
PHF12-203ENST00000378879 ANP32EQ9BTT0 268 aa29.43■■■□□ 2.3
PHF12-203ENST00000378879 ATAD2BQ9ULI0 1458 aa29.43■■■□□ 2.3
PHF12-203ENST00000378879 KANK4Q5T7N3 995 aaPredicted RBP29.34■■■□□ 2.29
PHF12-203ENST00000378879 TOP2BQ02880 1626 aa29.29■■■□□ 2.28
PHF12-203ENST00000378879 ARAP1Q96P48 1450 aa29.26■■■□□ 2.27
PHF12-203ENST00000378879 PRXQ9BXM0 1461 aa29.2■■■□□ 2.27
PHF12-203ENST00000378879 ERICH3Q5RHP9 1530 aa29.2■■■□□ 2.27
PHF12-203ENST00000378879 KCNH8Q96L42 1107 aa29.19■■■□□ 2.26
PHF12-203ENST00000378879 CUX2O14529 1486 aa29.18■■■□□ 2.26
PHF12-203ENST00000378879 RRBP1Q9P2E9 1410 aaKnown RBP29.17■■■□□ 2.26
PHF12-203ENST00000378879 ITGAEP38570 1179 aa29.17■■■□□ 2.26
PHF12-203ENST00000378879 BIVM-ERCC5R4GMW8 1640 aa29.11■■■□□ 2.25
PHF12-203ENST00000378879 BCL11AQ9H165 835 aa29.1■■■□□ 2.25
PHF12-203ENST00000378879 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
PHF12-203ENST00000378879 BCANQ96GW7 911 aa29.03■■■□□ 2.24
PHF12-203ENST00000378879 KIF27Q86VH2 1401 aa29.02■■■□□ 2.24
PHF12-203ENST00000378879 FKBP8Q14318 412 aa28.98■■■□□ 2.23
PHF12-203ENST00000378879 MAPKBP1O60336 1514 aa28.96■■■□□ 2.23
PHF12-203ENST00000378879 CUX1P39880 1505 aa28.93■■■□□ 2.22
PHF12-203ENST00000378879 ARHGAP35Q9NRY4 1499 aa28.93■■■□□ 2.22
PHF12-203ENST00000378879 RAB3GAP2Q9H2M9 1393 aa28.92■■■□□ 2.22
PHF12-203ENST00000378879 RBM19Q9Y4C8 960 aaKnown RBP28.87■■■□□ 2.21
PHF12-203ENST00000378879 DDX10Q13206 875 aaKnown RBP28.81■■■□□ 2.2
PHF12-203ENST00000378879 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
PHF12-203ENST00000378879 PPP1R15AO75807 674 aaPredicted RBP28.77■■■□□ 2.2
PHF12-203ENST00000378879 SETD5Q9C0A6 1442 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms