RNA–Protein interactions for RNA: ENST00000377435.8

REG1CP-201, Transcript of regenerating family member 1 gamma, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene REG1CP, Length 1,705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REG1CP-201ENST00000377435 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
REG1CP-201ENST00000377435 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
REG1CP-201ENST00000377435 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
REG1CP-201ENST00000377435 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
REG1CP-201ENST00000377435 POTEDQ86YR6 584 aa14.52□□□□□ -0.09
REG1CP-201ENST00000377435 NISCHQ9Y2I1 1504 aa14.49□□□□□ -0.09
REG1CP-201ENST00000377435 FOXD1Q16676 465 aa14.35□□□□□ -0.11
REG1CP-201ENST00000377435 MSH5O43196 834 aa13.81□□□□□ -0.2
REG1CP-201ENST00000377435 SLC24A1O60721 1099 aa13.4□□□□□ -0.26
REG1CP-201ENST00000377435 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
REG1CP-201ENST00000377435 MYT1Q01538 1121 aa12.9□□□□□ -0.34
REG1CP-201ENST00000377435 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
REG1CP-201ENST00000377435 TTBK1Q5TCY1 1321 aaPredicted RBP12.8□□□□□ -0.36
REG1CP-201ENST00000377435 CCDC180Q9P1Z9 1646 aa12.78□□□□□ -0.36
REG1CP-201ENST00000377435 ADRA2BP18089 450 aa12.77□□□□□ -0.36
REG1CP-201ENST00000377435 PLPPR3Q6T4P5 718 aa12.76□□□□□ -0.37
REG1CP-201ENST00000377435 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.38
REG1CP-201ENST00000377435 DAXXQ9UER7 740 aaPredicted RBP12.5□□□□□ -0.41
REG1CP-201ENST00000377435 ABCC9O60706 1549 aa12.41□□□□□ -0.42
REG1CP-201ENST00000377435 APLP2Q06481 763 aa12.34□□□□□ -0.43
REG1CP-201ENST00000377435 ERICH6Q7L0X2 663 aa12.24□□□□□ -0.45
REG1CP-201ENST00000377435 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
REG1CP-201ENST00000377435 CACNB1Q02641 598 aaPredicted RBP12.21□□□□□ -0.45
REG1CP-201ENST00000377435 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
REG1CP-201ENST00000377435 DMRT2Q9Y5R5 561 aa12.08□□□□□ -0.47
REG1CP-201ENST00000377435 DCAF8L2P0C7V8 631 aa12.07□□□□□ -0.48
REG1CP-201ENST00000377435 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
REG1CP-201ENST00000377435 NACADO15069 1562 aa12□□□□□ -0.49
REG1CP-201ENST00000377435 MYO15BQ96JP2 1530 aa11.98□□□□□ -0.49
REG1CP-201ENST00000377435 DCAF1Q9Y4B6 1507 aa11.98□□□□□ -0.49
REG1CP-201ENST00000377435 RB1CC1Q8TDY2 1594 aa11.98□□□□□ -0.49
REG1CP-201ENST00000377435 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
REG1CP-201ENST00000377435 SCAF1Q9H7N4 1312 aaKnown RBP11.87□□□□□ -0.51
REG1CP-201ENST00000377435 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
REG1CP-201ENST00000377435 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
REG1CP-201ENST00000377435 ARXQ96QS3 562 aa11.68□□□□□ -0.54
REG1CP-201ENST00000377435 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
REG1CP-201ENST00000377435 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
REG1CP-201ENST00000377435 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
REG1CP-201ENST00000377435 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
REG1CP-201ENST00000377435 BICRAQ9NZM4 1560 aa11.61□□□□□ -0.55
REG1CP-201ENST00000377435 DCAF8L1A6NGE4 600 aa11.59□□□□□ -0.55
REG1CP-201ENST00000377435 SHROOM4Q9ULL8 1493 aa11.55□□□□□ -0.56
REG1CP-201ENST00000377435 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
REG1CP-201ENST00000377435 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
REG1CP-201ENST00000377435 EIF5BO60841 1220 aaKnown RBP11.47□□□□□ -0.57
REG1CP-201ENST00000377435 RANGAP1P46060 587 aaPredicted RBP11.4□□□□□ -0.58
REG1CP-201ENST00000377435 HOXD11P31277 338 aaPredicted RBP11.38□□□□□ -0.59
REG1CP-201ENST00000377435 EIF4G1Q04637 1599 aaKnown RBP11.3□□□□□ -0.6
REG1CP-201ENST00000377435 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
REG1CP-201ENST00000377435 CECR2Q9BXF3 1484 aa11.28□□□□□ -0.6
REG1CP-201ENST00000377435 DNAJC5BQ9UF47 199 aa11.28□□□□□ -0.6
REG1CP-201ENST00000377435 POTEHQ6S545 545 aa11.27□□□□□ -0.61
REG1CP-201ENST00000377435 BCL11AQ9H165 835 aa11.23□□□□□ -0.61
REG1CP-201ENST00000377435 HOMEZQ8IX15 550 aa11.22□□□□□ -0.61
REG1CP-201ENST00000377435 CC2D2AQ9P2K1 1620 aa11.22□□□□□ -0.61
REG1CP-201ENST00000377435 BAZ1AQ9NRL2 1556 aaPredicted RBP11.21□□□□□ -0.61
REG1CP-201ENST00000377435 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
REG1CP-201ENST00000377435 MROH2BQ7Z745 1585 aa11.17□□□□□ -0.62
REG1CP-201ENST00000377435 RNF216Q9NWF9 866 aaPredicted RBP11.13□□□□□ -0.63
REG1CP-201ENST00000377435 ATAD2BQ9ULI0 1458 aa11.12□□□□□ -0.63
REG1CP-201ENST00000377435 KLHL34Q8N239 644 aa11.12□□□□□ -0.63
REG1CP-201ENST00000377435 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
REG1CP-201ENST00000377435 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
REG1CP-201ENST00000377435 NCAPD3P42695 1498 aa11.09□□□□□ -0.63
REG1CP-201ENST00000377435 PEG3Q9GZU2 1588 aa11.09□□□□□ -0.63
REG1CP-201ENST00000377435 TULP1O00294 542 aaPredicted RBP11.09□□□□□ -0.63
REG1CP-201ENST00000377435 KCNA4P22459 653 aa11.07□□□□□ -0.64
REG1CP-201ENST00000377435 PPP4R3CPQ6ZMV5 832 aa11.06□□□□□ -0.64
REG1CP-201ENST00000377435 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
REG1CP-201ENST00000377435 WIZO95785 1651 aa11.04□□□□□ -0.64
REG1CP-201ENST00000377435 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
REG1CP-201ENST00000377435 BAZ1BQ9UIG0 1483 aaKnown RBP11.03□□□□□ -0.64
REG1CP-201ENST00000377435 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
REG1CP-201ENST00000377435 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
REG1CP-201ENST00000377435 FAM9AQ8IZU1 332 aaPredicted RBP10.96□□□□□ -0.65
REG1CP-201ENST00000377435 PODXL2Q9NZ53 605 aa10.95□□□□□ -0.66
REG1CP-201ENST00000377435 SUPT5HO00267 1087 aaKnown RBP10.94□□□□□ -0.66
REG1CP-201ENST00000377435 TOP2AP11388 1531 aaKnown RBP10.94□□□□□ -0.66
REG1CP-201ENST00000377435 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.66
REG1CP-201ENST00000377435 BCANQ96GW7 911 aa10.87□□□□□ -0.67
REG1CP-201ENST00000377435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.67
REG1CP-201ENST00000377435 CCDC88BA6NC98 1476 aa10.82□□□□□ -0.68
REG1CP-201ENST00000377435 NESP48681 1621 aa10.78□□□□□ -0.68
REG1CP-201ENST00000377435 CADPSQ9ULU8 1353 aa10.78□□□□□ -0.68
REG1CP-201ENST00000377435 NPM2Q86SE8 214 aaKnown RBP10.78□□□□□ -0.68
REG1CP-201ENST00000377435 TPRNQ4KMQ1 711 aa10.76□□□□□ -0.69
REG1CP-201ENST00000377435 UBE2Q2Q8WVN8 375 aa10.76□□□□□ -0.69
REG1CP-201ENST00000377435 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
REG1CP-201ENST00000377435 LAMC3Q9Y6N6 1575 aa10.76□□□□□ -0.69
REG1CP-201ENST00000377435 CFTRP13569 1480 aa10.74□□□□□ -0.69
REG1CP-201ENST00000377435 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
REG1CP-201ENST00000377435 PDS5BQ9NTI5 1447 aa10.69□□□□□ -0.7
REG1CP-201ENST00000377435 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
REG1CP-201ENST00000377435 DSG3P32926 999 aa10.67□□□□□ -0.7
REG1CP-201ENST00000377435 PDIA4P13667 645 aaKnown RBP10.65□□□□□ -0.7
REG1CP-201ENST00000377435 FANCD2Q9BXW9 1451 aa10.65□□□□□ -0.7
REG1CP-201ENST00000377435 KIF21AQ7Z4S6 1674 aa10.62□□□□□ -0.71
REG1CP-201ENST00000377435 CEP164Q9UPV0 1460 aa10.62□□□□□ -0.71
REG1CP-201ENST00000377435 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms