RNA–Protein interactions for RNA: ENST00000377431.6

TMEM143-202, Transcript of transmembrane protein 143, humanhuman

TSL 1 (best) BASIC

Gene TMEM143, Length 1,960 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-202ENST00000377431 NISCHQ9Y2I1 1504 aa40.02■■■■■ 4
TMEM143-202ENST00000377431 CCDC180Q9P1Z9 1646 aa35.31■■■■□ 3.24
TMEM143-202ENST00000377431 ABCC9O60706 1549 aa34.2■■■■□ 3.07
TMEM143-202ENST00000377431 ZCCHC6Q5VYS8 1495 aaKnown RBP33.43■■■□□ 2.94
TMEM143-202ENST00000377431 DCAF8L2P0C7V8 631 aa33.23■■■□□ 2.91
TMEM143-202ENST00000377431 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
TMEM143-202ENST00000377431 NACADO15069 1562 aa33.12■■■□□ 2.89
TMEM143-202ENST00000377431 MYO15BQ96JP2 1530 aa33.1■■■□□ 2.89
TMEM143-202ENST00000377431 RB1CC1Q8TDY2 1594 aa33.03■■■□□ 2.88
TMEM143-202ENST00000377431 UNC13AQ9UPW8 1703 aa32.35■■■□□ 2.77
TMEM143-202ENST00000377431 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
TMEM143-202ENST00000377431 BICRAQ9NZM4 1560 aa32.12■■■□□ 2.73
TMEM143-202ENST00000377431 PABPN1Q86U42 306 aaKnown RBP eCLIP32.07■■■□□ 2.72
TMEM143-202ENST00000377431 SHROOM4Q9ULL8 1493 aa31.87■■■□□ 2.69
TMEM143-202ENST00000377431 EIF4G1Q04637 1599 aaKnown RBP31.19■■■□□ 2.58
TMEM143-202ENST00000377431 CECR2Q9BXF3 1484 aa31.18■■■□□ 2.58
TMEM143-202ENST00000377431 DNAJC5BQ9UF47 199 aa31.12■■■□□ 2.57
TMEM143-202ENST00000377431 CC2D2AQ9P2K1 1620 aa30.95■■■□□ 2.55
TMEM143-202ENST00000377431 BAZ1AQ9NRL2 1556 aaPredicted RBP30.95■■■□□ 2.54
TMEM143-202ENST00000377431 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
TMEM143-202ENST00000377431 MROH2BQ7Z745 1585 aa30.88■■■□□ 2.53
TMEM143-202ENST00000377431 ATAD2BQ9ULI0 1458 aa30.69■■■□□ 2.5
TMEM143-202ENST00000377431 RSF1Q96T23 1441 aaPredicted RBP30.69■■■□□ 2.5
TMEM143-202ENST00000377431 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
TMEM143-202ENST00000377431 NCAPD3P42695 1498 aa30.61■■■□□ 2.49
TMEM143-202ENST00000377431 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
TMEM143-202ENST00000377431 WIZO95785 1651 aa30.55■■■□□ 2.48
TMEM143-202ENST00000377431 HMGXB3Q12766 1538 aa30.46■■■□□ 2.47
TMEM143-202ENST00000377431 BAZ1BQ9UIG0 1483 aaKnown RBP30.41■■■□□ 2.46
TMEM143-202ENST00000377431 TOP2AP11388 1531 aaKnown RBP30.21■■■□□ 2.43
TMEM143-202ENST00000377431 SUPT5HO00267 1087 aaKnown RBP30.19■■■□□ 2.42
TMEM143-202ENST00000377431 CCDC88BA6NC98 1476 aa29.91■■■□□ 2.38
TMEM143-202ENST00000377431 NESP48681 1621 aa29.76■■■□□ 2.36
TMEM143-202ENST00000377431 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
TMEM143-202ENST00000377431 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
TMEM143-202ENST00000377431 CFTRP13569 1480 aa29.67■■■□□ 2.34
TMEM143-202ENST00000377431 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
TMEM143-202ENST00000377431 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
TMEM143-202ENST00000377431 FANCD2Q9BXW9 1451 aa29.38■■■□□ 2.29
TMEM143-202ENST00000377431 PRDM2Q13029 1718 aa29.37■■■□□ 2.29
TMEM143-202ENST00000377431 KIF21AQ7Z4S6 1674 aa29.37■■■□□ 2.29
TMEM143-202ENST00000377431 CEP164Q9UPV0 1460 aa29.26■■■□□ 2.27
TMEM143-202ENST00000377431 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
TMEM143-202ENST00000377431 MRC2Q9UBG0 1479 aa29.14■■■□□ 2.25
TMEM143-202ENST00000377431 URB2Q14146 1524 aaKnown RBP29.09■■■□□ 2.25
TMEM143-202ENST00000377431 WDR62O43379 1518 aa29.05■■■□□ 2.24
TMEM143-202ENST00000377431 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
TMEM143-202ENST00000377431 ABCC8Q09428 1581 aa28.94■■■□□ 2.22
TMEM143-202ENST00000377431 DNMBPQ6XZF7 1577 aa28.93■■■□□ 2.22
TMEM143-202ENST00000377431 CUX2O14529 1486 aa28.93■■■□□ 2.22
TMEM143-202ENST00000377431 CUX1P39880 1505 aa28.92■■■□□ 2.22
TMEM143-202ENST00000377431 WRNQ14191 1432 aaPredicted RBP eCLIP28.88■■■□□ 2.21
TMEM143-202ENST00000377431 SYNJ1O43426 1573 aa28.81■■■□□ 2.2
TMEM143-202ENST00000377431 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
TMEM143-202ENST00000377431 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
TMEM143-202ENST00000377431 BIVM-ERCC5R4GMW8 1640 aa28.74■■■□□ 2.19
TMEM143-202ENST00000377431 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
TMEM143-202ENST00000377431 RAD54L2Q9Y4B4 1467 aa28.64■■■□□ 2.18
TMEM143-202ENST00000377431 IFT140Q96RY7 1462 aa28.64■■■□□ 2.18
TMEM143-202ENST00000377431 TARBP1Q13395 1621 aaKnown RBP28.63■■■□□ 2.17
TMEM143-202ENST00000377431 SOGA1O94964 1423 aa28.63■■■□□ 2.17
TMEM143-202ENST00000377431 ZNF608Q9ULD9 1512 aaPredicted RBP28.55■■■□□ 2.16
TMEM143-202ENST00000377431 ABCA10Q8WWZ4 1543 aa28.49■■■□□ 2.15
TMEM143-202ENST00000377431 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
TMEM143-202ENST00000377431 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
TMEM143-202ENST00000377431 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
TMEM143-202ENST00000377431 TDRD9Q8NDG6 1382 aaKnown RBP28.45■■■□□ 2.14
TMEM143-202ENST00000377431 AQRO60306 1485 aaKnown RBP eCLIP28.43■■■□□ 2.144e-7■■■■■ 29.2
TMEM143-202ENST00000377431 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.14
TMEM143-202ENST00000377431 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
TMEM143-202ENST00000377431 GAPVD1Q14C86 1478 aa28.3■■■□□ 2.12
TMEM143-202ENST00000377431 GRIN2BQ13224 1484 aa28.22■■■□□ 2.11
TMEM143-202ENST00000377431 KIF27Q86VH2 1401 aa28.21■■■□□ 2.11
TMEM143-202ENST00000377431 RUSC2Q8N2Y8 1516 aa28.19■■■□□ 2.1
TMEM143-202ENST00000377431 PBRM1Q86U86 1689 aa28.17■■■□□ 2.1
TMEM143-202ENST00000377431 SNAPC4Q5SXM2 1469 aa28.14■■■□□ 2.09
TMEM143-202ENST00000377431 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
TMEM143-202ENST00000377431 IGF1RP08069 1367 aa28.13■■■□□ 2.09
TMEM143-202ENST00000377431 MAGI1Q96QZ7 1491 aaPredicted RBP28.1■■■□□ 2.09
TMEM143-202ENST00000377431 ADAMTS12P58397 1594 aa28■■■□□ 2.07
TMEM143-202ENST00000377431 SYNJ2O15056 1496 aa28■■■□□ 2.07
TMEM143-202ENST00000377431 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
TMEM143-202ENST00000377431 FBLN2P98095 1184 aa27.94■■■□□ 2.06
TMEM143-202ENST00000377431 CHMP7Q8WUX9 453 aaPredicted RBP27.94■■■□□ 2.06
TMEM143-202ENST00000377431 EEA1Q15075 1411 aa27.93■■■□□ 2.06
TMEM143-202ENST00000377431 CHD1O14646 1710 aa27.93■■■□□ 2.06
TMEM143-202ENST00000377431 CARMIL1Q5VZK9 1371 aa27.92■■■□□ 2.06
TMEM143-202ENST00000377431 CUL7Q14999 1698 aa27.92■■■□□ 2.06
TMEM143-202ENST00000377431 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
TMEM143-202ENST00000377431 CSRNP3Q8WYN3 585 aa27.9■■■□□ 2.06
TMEM143-202ENST00000377431 GRIN2AQ12879 1464 aa27.88■■■□□ 2.05
TMEM143-202ENST00000377431 PRXQ9BXM0 1461 aa27.85■■■□□ 2.05
TMEM143-202ENST00000377431 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
TMEM143-202ENST00000377431 RAPGEF2Q9Y4G8 1499 aa27.78■■■□□ 2.04
TMEM143-202ENST00000377431 NUP160Q12769 1436 aa27.76■■■□□ 2.03
TMEM143-202ENST00000377431 CEP170Q5SW79 1584 aa27.74■■■□□ 2.03
TMEM143-202ENST00000377431 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
TMEM143-202ENST00000377431 KIF21BO75037 1637 aa27.64■■■□□ 2.01
TMEM143-202ENST00000377431 DNAJC5Q9H3Z4 198 aa27.61■■■□□ 2.01
TMEM143-202ENST00000377431 KIAA0586Q9BVV6 1533 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms