RNA–Protein interactions for RNA: ENST00000376560.7

PRR3-202, Transcript of proline rich 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRR3, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR3-202ENST00000376560 NISCHQ9Y2I1 1504 aa29.88■■■□□ 2.37
PRR3-202ENST00000376560 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
PRR3-202ENST00000376560 ABCC9O60706 1549 aa25.13■■□□□ 1.61
PRR3-202ENST00000376560 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
PRR3-202ENST00000376560 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
PRR3-202ENST00000376560 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
PRR3-202ENST00000376560 NACADO15069 1562 aa24.39■■□□□ 1.5
PRR3-202ENST00000376560 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
PRR3-202ENST00000376560 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
PRR3-202ENST00000376560 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
PRR3-202ENST00000376560 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
PRR3-202ENST00000376560 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
PRR3-202ENST00000376560 PABPN1Q86U42 306 aaKnown RBP eCLIP23.67■■□□□ 1.38
PRR3-202ENST00000376560 BICRAQ9NZM4 1560 aa23.64■■□□□ 1.38
PRR3-202ENST00000376560 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
PRR3-202ENST00000376560 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
PRR3-202ENST00000376560 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.3
PRR3-202ENST00000376560 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
PRR3-202ENST00000376560 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
PRR3-202ENST00000376560 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
PRR3-202ENST00000376560 WIZO95785 1651 aa22.99■■□□□ 1.27
PRR3-202ENST00000376560 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
PRR3-202ENST00000376560 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
PRR3-202ENST00000376560 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
PRR3-202ENST00000376560 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
PRR3-202ENST00000376560 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
PRR3-202ENST00000376560 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
PRR3-202ENST00000376560 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
PRR3-202ENST00000376560 NCAPD3P42695 1498 aa22.52■■□□□ 1.2
PRR3-202ENST00000376560 DNAJC5BQ9UF47 199 aa22.47■■□□□ 1.19
PRR3-202ENST00000376560 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
PRR3-202ENST00000376560 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
PRR3-202ENST00000376560 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
PRR3-202ENST00000376560 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
PRR3-202ENST00000376560 NESP48681 1621 aa22■■□□□ 1.11
PRR3-202ENST00000376560 CFTRP13569 1480 aa21.97■■□□□ 1.11
PRR3-202ENST00000376560 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
PRR3-202ENST00000376560 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
PRR3-202ENST00000376560 HRCP23327 699 aa21.92■■□□□ 1.1
PRR3-202ENST00000376560 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
PRR3-202ENST00000376560 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.08
PRR3-202ENST00000376560 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
PRR3-202ENST00000376560 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
PRR3-202ENST00000376560 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.07
PRR3-202ENST00000376560 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
PRR3-202ENST00000376560 KIF21AQ7Z4S6 1674 aa21.73■■□□□ 1.07
PRR3-202ENST00000376560 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
PRR3-202ENST00000376560 CUX1P39880 1505 aa21.64■■□□□ 1.06
PRR3-202ENST00000376560 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
PRR3-202ENST00000376560 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
PRR3-202ENST00000376560 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.04
PRR3-202ENST00000376560 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
PRR3-202ENST00000376560 MYT1Q01538 1121 aa21.54■■□□□ 1.04
PRR3-202ENST00000376560 FAM9AQ8IZU1 332 aaPredicted RBP21.53■■□□□ 1.04
PRR3-202ENST00000376560 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
PRR3-202ENST00000376560 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
PRR3-202ENST00000376560 TOPBP1Q92547 1522 aa21.49■■□□□ 1.03
PRR3-202ENST00000376560 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
PRR3-202ENST00000376560 SOGA1O94964 1423 aa21.45■■□□□ 1.02
PRR3-202ENST00000376560 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
PRR3-202ENST00000376560 RUSC2Q8N2Y8 1516 aa21.43■■□□□ 1.02
PRR3-202ENST00000376560 MRC2Q9UBG0 1479 aa21.42■■□□□ 1.02
PRR3-202ENST00000376560 THOC2Q8NI27 1593 aaKnown RBP21.37■■□□□ 1.01
PRR3-202ENST00000376560 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
PRR3-202ENST00000376560 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
PRR3-202ENST00000376560 EHMT2Q96KQ7 1210 aa21.35■■□□□ 1.01
PRR3-202ENST00000376560 WDR62O43379 1518 aa21.32■■□□□ 1
PRR3-202ENST00000376560 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
PRR3-202ENST00000376560 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
PRR3-202ENST00000376560 CUX2O14529 1486 aa21.25■□□□□ 0.99
PRR3-202ENST00000376560 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
PRR3-202ENST00000376560 TARBP1Q13395 1621 aaKnown RBP21.2■□□□□ 0.98
PRR3-202ENST00000376560 ABCA10Q8WWZ4 1543 aa21.18■□□□□ 0.98
PRR3-202ENST00000376560 TRIM26Q12899 539 aaPredicted RBP21.18■□□□□ 0.98
PRR3-202ENST00000376560 CSRNP3Q8WYN3 585 aa21.18■□□□□ 0.98
PRR3-202ENST00000376560 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
PRR3-202ENST00000376560 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
PRR3-202ENST00000376560 EEA1Q15075 1411 aa21.16■□□□□ 0.98
PRR3-202ENST00000376560 ZNF608Q9ULD9 1512 aaPredicted RBP21.11■□□□□ 0.97
PRR3-202ENST00000376560 IFT140Q96RY7 1462 aa21.08■□□□□ 0.97
PRR3-202ENST00000376560 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.961e-6■■■■■ 34.6
PRR3-202ENST00000376560 ABCA5Q8WWZ7 1642 aa21.08■□□□□ 0.96
PRR3-202ENST00000376560 IGF1RP08069 1367 aa21.05■□□□□ 0.96
PRR3-202ENST00000376560 GAPVD1Q14C86 1478 aa21.04■□□□□ 0.96
PRR3-202ENST00000376560 PBRM1Q86U86 1689 aa21.01■□□□□ 0.95
PRR3-202ENST00000376560 EIF4G3O43432 1585 aaKnown RBP21.01■□□□□ 0.95
PRR3-202ENST00000376560 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
PRR3-202ENST00000376560 KIF21BO75037 1637 aa20.99■□□□□ 0.95
PRR3-202ENST00000376560 PRXQ9BXM0 1461 aa20.97■□□□□ 0.95
PRR3-202ENST00000376560 ZEB1P37275 1124 aaPredicted RBP20.95■□□□□ 0.95
PRR3-202ENST00000376560 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
PRR3-202ENST00000376560 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
PRR3-202ENST00000376560 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
PRR3-202ENST00000376560 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
PRR3-202ENST00000376560 CUL7Q14999 1698 aa20.89■□□□□ 0.93
PRR3-202ENST00000376560 GRIN2BQ13224 1484 aa20.89■□□□□ 0.93
PRR3-202ENST00000376560 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
PRR3-202ENST00000376560 SNAPC4Q5SXM2 1469 aa20.85■□□□□ 0.93
PRR3-202ENST00000376560 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
PRR3-202ENST00000376560 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms