RNA–Protein interactions for RNA: ENST00000376345.3

GID4-202, Transcript of GID complex subunit 4 homolog, humanhuman

TSL 3 BASIC

Gene GID4, Length 1,391 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GID4-202ENST00000376345 NISCHQ9Y2I1 1504 aa41.51■■■■■ 4.24
GID4-202ENST00000376345 CCDC180Q9P1Z9 1646 aa36.74■■■■□ 3.47
GID4-202ENST00000376345 ABCC9O60706 1549 aa35.52■■■■□ 3.28
GID4-202ENST00000376345 ZCCHC6Q5VYS8 1495 aaKnown RBP34.67■■■■□ 3.14
GID4-202ENST00000376345 NACADO15069 1562 aa34.46■■■■□ 3.11
GID4-202ENST00000376345 MYO15BQ96JP2 1530 aa34.44■■■■□ 3.1
GID4-202ENST00000376345 DCAF8L2P0C7V8 631 aa34.42■■■■□ 3.1
GID4-202ENST00000376345 DCAF1Q9Y4B6 1507 aa34.41■■■■□ 3.1
GID4-202ENST00000376345 RB1CC1Q8TDY2 1594 aa34.39■■■■□ 3.1
GID4-202ENST00000376345 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.96
GID4-202ENST00000376345 SCRIBQ14160 1630 aa33.5■■■□□ 2.95
GID4-202ENST00000376345 BICRAQ9NZM4 1560 aa33.33■■■□□ 2.93
GID4-202ENST00000376345 PABPN1Q86U42 306 aaKnown RBP eCLIP33.24■■■□□ 2.91
GID4-202ENST00000376345 SHROOM4Q9ULL8 1493 aa33.08■■■□□ 2.89
GID4-202ENST00000376345 EIF4G1Q04637 1599 aaKnown RBP32.41■■■□□ 2.78
GID4-202ENST00000376345 CECR2Q9BXF3 1484 aa32.26■■■□□ 2.76
GID4-202ENST00000376345 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
GID4-202ENST00000376345 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
GID4-202ENST00000376345 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
GID4-202ENST00000376345 SMARCA4P51532 1647 aa32.11■■■□□ 2.73
GID4-202ENST00000376345 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
GID4-202ENST00000376345 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
GID4-202ENST00000376345 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
GID4-202ENST00000376345 PEG3Q9GZU2 1588 aa31.84■■■□□ 2.69
GID4-202ENST00000376345 NCAPD3P42695 1498 aa31.8■■■□□ 2.68
GID4-202ENST00000376345 RSF1Q96T23 1441 aaPredicted RBP31.77■■■□□ 2.68
GID4-202ENST00000376345 HMGXB3Q12766 1538 aa31.68■■■□□ 2.66
GID4-202ENST00000376345 WIZO95785 1651 aa31.63■■■□□ 2.65
GID4-202ENST00000376345 BAZ1BQ9UIG0 1483 aaKnown RBP31.6■■■□□ 2.65
GID4-202ENST00000376345 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
GID4-202ENST00000376345 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
GID4-202ENST00000376345 CCDC88BA6NC98 1476 aa30.98■■■□□ 2.55
GID4-202ENST00000376345 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
GID4-202ENST00000376345 CADPSQ9ULU8 1353 aa30.88■■■□□ 2.53
GID4-202ENST00000376345 NESP48681 1621 aa30.86■■■□□ 2.53
GID4-202ENST00000376345 CFTRP13569 1480 aa30.79■■■□□ 2.52
GID4-202ENST00000376345 PDS5BQ9NTI5 1447 aa30.66■■■□□ 2.5
GID4-202ENST00000376345 ERCC6Q03468 1493 aa30.59■■■□□ 2.49
GID4-202ENST00000376345 PRDM2Q13029 1718 aa30.55■■■□□ 2.48
GID4-202ENST00000376345 FANCD2Q9BXW9 1451 aa30.51■■■□□ 2.47
GID4-202ENST00000376345 KIF21AQ7Z4S6 1674 aa30.49■■■□□ 2.47
GID4-202ENST00000376345 CEP164Q9UPV0 1460 aa30.43■■■□□ 2.46
GID4-202ENST00000376345 THOC2Q8NI27 1593 aaKnown RBP30.33■■■□□ 2.45
GID4-202ENST00000376345 MRC2Q9UBG0 1479 aa30.31■■■□□ 2.44
GID4-202ENST00000376345 WDR62O43379 1518 aa30.21■■■□□ 2.43
GID4-202ENST00000376345 CUX2O14529 1486 aa30.18■■■□□ 2.42
GID4-202ENST00000376345 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
GID4-202ENST00000376345 ABCC8Q09428 1581 aa30.12■■■□□ 2.41
GID4-202ENST00000376345 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
GID4-202ENST00000376345 DNMBPQ6XZF7 1577 aa30.07■■■□□ 2.4
GID4-202ENST00000376345 CUX1P39880 1505 aa29.98■■■□□ 2.39
GID4-202ENST00000376345 WRNQ14191 1432 aaPredicted RBP eCLIP29.94■■■□□ 2.38
GID4-202ENST00000376345 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
GID4-202ENST00000376345 TOP2BQ02880 1626 aa29.84■■■□□ 2.37
GID4-202ENST00000376345 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
GID4-202ENST00000376345 SYNJ1O43426 1573 aa29.82■■■□□ 2.36
GID4-202ENST00000376345 FGD5Q6ZNL6 1462 aa29.82■■■□□ 2.36
GID4-202ENST00000376345 IFT140Q96RY7 1462 aa29.79■■■□□ 2.36
GID4-202ENST00000376345 SOGA1O94964 1423 aa29.72■■■□□ 2.35
GID4-202ENST00000376345 TARBP1Q13395 1621 aaKnown RBP29.71■■■□□ 2.35
GID4-202ENST00000376345 RAD54L2Q9Y4B4 1467 aa29.67■■■□□ 2.34
GID4-202ENST00000376345 ZNF608Q9ULD9 1512 aaPredicted RBP29.59■■■□□ 2.33
GID4-202ENST00000376345 ABCA10Q8WWZ4 1543 aa29.58■■■□□ 2.33
GID4-202ENST00000376345 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
GID4-202ENST00000376345 EIF4G3O43432 1585 aaKnown RBP29.5■■■□□ 2.31
GID4-202ENST00000376345 TDRD9Q8NDG6 1382 aaKnown RBP29.48■■■□□ 2.31
GID4-202ENST00000376345 AQRO60306 1485 aaKnown RBP eCLIP29.47■■■□□ 2.31
GID4-202ENST00000376345 TRIM41Q8WV44 630 aa29.47■■■□□ 2.31
GID4-202ENST00000376345 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
GID4-202ENST00000376345 GAPVD1Q14C86 1478 aa29.38■■■□□ 2.29
GID4-202ENST00000376345 CHIC1Q5VXU3 224 aa29.38■■■□□ 2.29
GID4-202ENST00000376345 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
GID4-202ENST00000376345 DNAJC5Q9H3Z4 198 aa29.32■■■□□ 2.28
GID4-202ENST00000376345 KIF27Q86VH2 1401 aa29.3■■■□□ 2.28
GID4-202ENST00000376345 PBRM1Q86U86 1689 aa29.27■■■□□ 2.28
GID4-202ENST00000376345 MAGI1Q96QZ7 1491 aaPredicted RBP29.24■■■□□ 2.27
GID4-202ENST00000376345 ERICH3Q5RHP9 1530 aa29.23■■■□□ 2.27
GID4-202ENST00000376345 SNAPC4Q5SXM2 1469 aa29.22■■■□□ 2.27
GID4-202ENST00000376345 IGF1RP08069 1367 aa29.12■■■□□ 2.25
GID4-202ENST00000376345 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
GID4-202ENST00000376345 RUSC2Q8N2Y8 1516 aa29.1■■■□□ 2.25
GID4-202ENST00000376345 ADAMTS12P58397 1594 aa29.1■■■□□ 2.25
GID4-202ENST00000376345 FHAD1B1AJZ9 1412 aa29.08■■■□□ 2.25
GID4-202ENST00000376345 CHD1O14646 1710 aa29.03■■■□□ 2.24
GID4-202ENST00000376345 CUL7Q14999 1698 aa29.03■■■□□ 2.24
GID4-202ENST00000376345 CHMP7Q8WUX9 453 aaPredicted RBP29.02■■■□□ 2.24
GID4-202ENST00000376345 EEA1Q15075 1411 aa29.02■■■□□ 2.24
GID4-202ENST00000376345 FBLN2P98095 1184 aa29.01■■■□□ 2.23
GID4-202ENST00000376345 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
GID4-202ENST00000376345 GRIN2AQ12879 1464 aa28.96■■■□□ 2.23
GID4-202ENST00000376345 CARMIL1Q5VZK9 1371 aa28.96■■■□□ 2.23
GID4-202ENST00000376345 CSRNP3Q8WYN3 585 aa28.88■■■□□ 2.21
GID4-202ENST00000376345 PRXQ9BXM0 1461 aa28.84■■■□□ 2.21
GID4-202ENST00000376345 RAPGEF2Q9Y4G8 1499 aa28.83■■■□□ 2.21
GID4-202ENST00000376345 NUP160Q12769 1436 aa28.83■■■□□ 2.21
GID4-202ENST00000376345 FAM9AQ8IZU1 332 aaPredicted RBP28.79■■■□□ 2.2
GID4-202ENST00000376345 CEP170Q5SW79 1584 aa28.78■■■□□ 2.2
GID4-202ENST00000376345 CLASP1Q7Z460 1538 aa28.77■■■□□ 2.2
GID4-202ENST00000376345 KIF21BO75037 1637 aa28.66■■■□□ 2.18
GID4-202ENST00000376345 KIAA0586Q9BVV6 1533 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms