RNA–Protein interactions for RNA: ENST00000375896.8

GPANK1-203, Transcript of G-patch domain and ankyrin repeats 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPANK1, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPANK1-203ENST00000375896 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
GPANK1-203ENST00000375896 ABCC9O60706 1549 aa31.44■■■□□ 2.62
GPANK1-203ENST00000375896 CCDC180Q9P1Z9 1646 aa31.27■■■□□ 2.6
GPANK1-203ENST00000375896 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
GPANK1-203ENST00000375896 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
GPANK1-203ENST00000375896 NACADO15069 1562 aa29.53■■■□□ 2.32
GPANK1-203ENST00000375896 DCAF8L2P0C7V8 631 aa29.26■■■□□ 2.27
GPANK1-203ENST00000375896 UNC13AQ9UPW8 1703 aa29.24■■■□□ 2.27
GPANK1-203ENST00000375896 PABPN1Q86U42 306 aaKnown RBP eCLIP29.18■■■□□ 2.26
GPANK1-203ENST00000375896 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
GPANK1-203ENST00000375896 BICRAQ9NZM4 1560 aa29.02■■■□□ 2.24
GPANK1-203ENST00000375896 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
GPANK1-203ENST00000375896 DCAF1Q9Y4B6 1507 aa28.63■■■□□ 2.17
GPANK1-203ENST00000375896 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
GPANK1-203ENST00000375896 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.15
GPANK1-203ENST00000375896 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
GPANK1-203ENST00000375896 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
GPANK1-203ENST00000375896 EIF4G1Q04637 1599 aaKnown RBP28.29■■■□□ 2.12
GPANK1-203ENST00000375896 NCAPD3P42695 1498 aa27.24■■□□□ 1.95
GPANK1-203ENST00000375896 DNAJC5Q9H3Z4 198 aa27.2■■□□□ 1.95
GPANK1-203ENST00000375896 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
GPANK1-203ENST00000375896 SMARCA4P51532 1647 aa27.17■■□□□ 1.94
GPANK1-203ENST00000375896 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
GPANK1-203ENST00000375896 CUX2O14529 1486 aa27.11■■□□□ 1.93
GPANK1-203ENST00000375896 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
GPANK1-203ENST00000375896 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
GPANK1-203ENST00000375896 NESP48681 1621 aa26.98■■□□□ 1.91
GPANK1-203ENST00000375896 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.91
GPANK1-203ENST00000375896 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
GPANK1-203ENST00000375896 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
GPANK1-203ENST00000375896 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
GPANK1-203ENST00000375896 THOC2Q8NI27 1593 aaKnown RBP26.78■■□□□ 1.88
GPANK1-203ENST00000375896 LAMC3Q9Y6N6 1575 aa26.7■■□□□ 1.87
GPANK1-203ENST00000375896 KIF21AQ7Z4S6 1674 aa26.67■■□□□ 1.86
GPANK1-203ENST00000375896 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
GPANK1-203ENST00000375896 WIZO95785 1651 aa26.48■■□□□ 1.83
GPANK1-203ENST00000375896 CADPSQ9ULU8 1353 aa26.39■■□□□ 1.82
GPANK1-203ENST00000375896 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
GPANK1-203ENST00000375896 WDR62O43379 1518 aa26.32■■□□□ 1.8
GPANK1-203ENST00000375896 SUPT5HO00267 1087 aaKnown RBP26.22■■□□□ 1.79
GPANK1-203ENST00000375896 CEP164Q9UPV0 1460 aa26.21■■□□□ 1.79
GPANK1-203ENST00000375896 FANCD2Q9BXW9 1451 aa26.16■■□□□ 1.78
GPANK1-203ENST00000375896 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
GPANK1-203ENST00000375896 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
GPANK1-203ENST00000375896 CFTRP13569 1480 aa26.1■■□□□ 1.77
GPANK1-203ENST00000375896 TRIM41Q8WV44 630 aa26.01■■□□□ 1.75
GPANK1-203ENST00000375896 URB2Q14146 1524 aaKnown RBP26■■□□□ 1.75
GPANK1-203ENST00000375896 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
GPANK1-203ENST00000375896 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
GPANK1-203ENST00000375896 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
GPANK1-203ENST00000375896 ZNF608Q9ULD9 1512 aaPredicted RBP25.71■■□□□ 1.71
GPANK1-203ENST00000375896 TOPBP1Q92547 1522 aa25.66■■□□□ 1.7
GPANK1-203ENST00000375896 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
GPANK1-203ENST00000375896 RIMBP3CA6NJZ7 1639 aa25.6■■□□□ 1.69
GPANK1-203ENST00000375896 RIMBP3BA6NNM3 1639 aa25.6■■□□□ 1.69
GPANK1-203ENST00000375896 RIMBP3Q9UFD9 1639 aa25.6■■□□□ 1.69
GPANK1-203ENST00000375896 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
GPANK1-203ENST00000375896 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
GPANK1-203ENST00000375896 ARHGEF11O15085 1522 aa25.48■■□□□ 1.67
GPANK1-203ENST00000375896 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
GPANK1-203ENST00000375896 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
GPANK1-203ENST00000375896 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.67
GPANK1-203ENST00000375896 CHD1O14646 1710 aa25.45■■□□□ 1.66
GPANK1-203ENST00000375896 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.667e-6■□□□□ 9.9
GPANK1-203ENST00000375896 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.66
GPANK1-203ENST00000375896 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
GPANK1-203ENST00000375896 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
GPANK1-203ENST00000375896 FGD5Q6ZNL6 1462 aa25.22■■□□□ 1.63
GPANK1-203ENST00000375896 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.62
GPANK1-203ENST00000375896 FBLN2P98095 1184 aa25.2■■□□□ 1.62
GPANK1-203ENST00000375896 SOGA1O94964 1423 aa25.19■■□□□ 1.62
GPANK1-203ENST00000375896 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
GPANK1-203ENST00000375896 CUX1P39880 1505 aa25.19■■□□□ 1.62
GPANK1-203ENST00000375896 CYB5RLQ6IPT4 315 aa25.18■■□□□ 1.62
GPANK1-203ENST00000375896 WDR97A6NE52 1622 aa25.14■■□□□ 1.62
GPANK1-203ENST00000375896 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
GPANK1-203ENST00000375896 MAGI1Q96QZ7 1491 aaPredicted RBP25.06■■□□□ 1.6
GPANK1-203ENST00000375896 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
GPANK1-203ENST00000375896 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
GPANK1-203ENST00000375896 GRIN2BQ13224 1484 aa25.03■■□□□ 1.6
GPANK1-203ENST00000375896 SYNJ2O15056 1496 aa24.98■■□□□ 1.59
GPANK1-203ENST00000375896 TRHP20396 242 aaPredicted RBP24.96■■□□□ 1.59
GPANK1-203ENST00000375896 CHMP7Q8WUX9 453 aaPredicted RBP24.95■■□□□ 1.58
GPANK1-203ENST00000375896 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
GPANK1-203ENST00000375896 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
GPANK1-203ENST00000375896 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.57
GPANK1-203ENST00000375896 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
GPANK1-203ENST00000375896 HRCP23327 699 aa24.78■■□□□ 1.56
GPANK1-203ENST00000375896 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
GPANK1-203ENST00000375896 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
GPANK1-203ENST00000375896 BIVM-ERCC5R4GMW8 1640 aa24.74■■□□□ 1.55
GPANK1-203ENST00000375896 CEP170Q5SW79 1584 aa24.72■■□□□ 1.55
GPANK1-203ENST00000375896 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
GPANK1-203ENST00000375896 WRNQ14191 1432 aaPredicted RBP eCLIP24.7■■□□□ 1.54
GPANK1-203ENST00000375896 NUP160Q12769 1436 aa24.66■■□□□ 1.54
GPANK1-203ENST00000375896 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
GPANK1-203ENST00000375896 FHAD1B1AJZ9 1412 aa24.58■■□□□ 1.53
GPANK1-203ENST00000375896 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
GPANK1-203ENST00000375896 LOC105371045A0A1W2PR82 267 aa24.53■■□□□ 1.52
GPANK1-203ENST00000375896 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms