RNA–Protein interactions for RNA: ENST00000375880.6

AL662899.3-201, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AL662899.3, Length 2,487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662899.3-201ENST00000375880 NISCHQ9Y2I1 1504 aa24.82■■□□□ 1.56
AL662899.3-201ENST00000375880 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
AL662899.3-201ENST00000375880 ABCC9O60706 1549 aa21.12■□□□□ 0.97
AL662899.3-201ENST00000375880 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
AL662899.3-201ENST00000375880 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
AL662899.3-201ENST00000375880 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.87
AL662899.3-201ENST00000375880 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
AL662899.3-201ENST00000375880 NACADO15069 1562 aa20.23■□□□□ 0.83
AL662899.3-201ENST00000375880 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
AL662899.3-201ENST00000375880 MYO15BQ96JP2 1530 aa20.14■□□□□ 0.81
AL662899.3-201ENST00000375880 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
AL662899.3-201ENST00000375880 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.797e-7■□□□□ 9.3
AL662899.3-201ENST00000375880 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
AL662899.3-201ENST00000375880 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.78
AL662899.3-201ENST00000375880 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
AL662899.3-201ENST00000375880 CECR2Q9BXF3 1484 aa19.51■□□□□ 0.71
AL662899.3-201ENST00000375880 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
AL662899.3-201ENST00000375880 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
AL662899.3-201ENST00000375880 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
AL662899.3-201ENST00000375880 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.65
AL662899.3-201ENST00000375880 SMARCA4P51532 1647 aa19.14■□□□□ 0.65
AL662899.3-201ENST00000375880 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
AL662899.3-201ENST00000375880 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
AL662899.3-201ENST00000375880 WIZO95785 1651 aa19.1■□□□□ 0.65
AL662899.3-201ENST00000375880 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
AL662899.3-201ENST00000375880 ATAD2BQ9ULI0 1458 aa18.96■□□□□ 0.63
AL662899.3-201ENST00000375880 HRCP23327 699 aa18.85■□□□□ 0.61
AL662899.3-201ENST00000375880 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
AL662899.3-201ENST00000375880 PEG3Q9GZU2 1588 aa18.8■□□□□ 0.6
AL662899.3-201ENST00000375880 SMARCA2P51531 1590 aa18.79■□□□□ 0.6
AL662899.3-201ENST00000375880 NCAPD3P42695 1498 aa18.76■□□□□ 0.59
AL662899.3-201ENST00000375880 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
AL662899.3-201ENST00000375880 CCDC88BA6NC98 1476 aa18.67■□□□□ 0.58
AL662899.3-201ENST00000375880 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
AL662899.3-201ENST00000375880 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
AL662899.3-201ENST00000375880 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
AL662899.3-201ENST00000375880 NESP48681 1621 aa18.48■□□□□ 0.55
AL662899.3-201ENST00000375880 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
AL662899.3-201ENST00000375880 FAM9AQ8IZU1 332 aaPredicted RBP18.42■□□□□ 0.54
AL662899.3-201ENST00000375880 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
AL662899.3-201ENST00000375880 CADPSQ9ULU8 1353 aa18.32■□□□□ 0.52
AL662899.3-201ENST00000375880 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
AL662899.3-201ENST00000375880 CFTRP13569 1480 aa18.29■□□□□ 0.52
AL662899.3-201ENST00000375880 EHMT2Q96KQ7 1210 aa18.26■□□□□ 0.51
AL662899.3-201ENST00000375880 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
AL662899.3-201ENST00000375880 LAMC3Q9Y6N6 1575 aa18.12■□□□□ 0.49
AL662899.3-201ENST00000375880 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
AL662899.3-201ENST00000375880 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
AL662899.3-201ENST00000375880 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.48
AL662899.3-201ENST00000375880 SOGA1O94964 1423 aa18.03■□□□□ 0.48
AL662899.3-201ENST00000375880 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
AL662899.3-201ENST00000375880 PELP1Q8IZL8 1130 aaKnown RBP18.03■□□□□ 0.48
AL662899.3-201ENST00000375880 CUX1P39880 1505 aa18.02■□□□□ 0.48
AL662899.3-201ENST00000375880 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
AL662899.3-201ENST00000375880 CEP164Q9UPV0 1460 aa18.02■□□□□ 0.47
AL662899.3-201ENST00000375880 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
AL662899.3-201ENST00000375880 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
AL662899.3-201ENST00000375880 TRIM26Q12899 539 aaPredicted RBP17.97■□□□□ 0.47
AL662899.3-201ENST00000375880 RUSC2Q8N2Y8 1516 aa17.97■□□□□ 0.47
AL662899.3-201ENST00000375880 EEA1Q15075 1411 aa17.91■□□□□ 0.46
AL662899.3-201ENST00000375880 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
AL662899.3-201ENST00000375880 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
AL662899.3-201ENST00000375880 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
AL662899.3-201ENST00000375880 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
AL662899.3-201ENST00000375880 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
AL662899.3-201ENST00000375880 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
AL662899.3-201ENST00000375880 POLA1P09884 1462 aaPredicted RBP17.83■□□□□ 0.45
AL662899.3-201ENST00000375880 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.45
AL662899.3-201ENST00000375880 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
AL662899.3-201ENST00000375880 BIVM-ERCC5R4GMW8 1640 aa17.81■□□□□ 0.44
AL662899.3-201ENST00000375880 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
AL662899.3-201ENST00000375880 CEP162Q5TB80 1403 aa17.78■□□□□ 0.44
AL662899.3-201ENST00000375880 UBTFP17480 764 aaKnown RBP17.78■□□□□ 0.44
AL662899.3-201ENST00000375880 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.44
AL662899.3-201ENST00000375880 CUX2O14529 1486 aa17.77■□□□□ 0.43
AL662899.3-201ENST00000375880 GOLGA3Q08378 1498 aa17.77■□□□□ 0.43
AL662899.3-201ENST00000375880 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
AL662899.3-201ENST00000375880 WDR62O43379 1518 aa17.76■□□□□ 0.43
AL662899.3-201ENST00000375880 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
AL662899.3-201ENST00000375880 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
AL662899.3-201ENST00000375880 KIF21BO75037 1637 aa17.7■□□□□ 0.42
AL662899.3-201ENST00000375880 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.422e-8■■■■■ 27.4
AL662899.3-201ENST00000375880 TARBP1Q13395 1621 aaKnown RBP17.64■□□□□ 0.41
AL662899.3-201ENST00000375880 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
AL662899.3-201ENST00000375880 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
AL662899.3-201ENST00000375880 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.41
AL662899.3-201ENST00000375880 KIF27Q86VH2 1401 aa17.56■□□□□ 0.4
AL662899.3-201ENST00000375880 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
AL662899.3-201ENST00000375880 IGF1RP08069 1367 aa17.55■□□□□ 0.4
AL662899.3-201ENST00000375880 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
AL662899.3-201ENST00000375880 CLIP1P30622 1438 aa17.53■□□□□ 0.4
AL662899.3-201ENST00000375880 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.4
AL662899.3-201ENST00000375880 RANGAP1P46060 587 aaPredicted RBP17.51■□□□□ 0.39
AL662899.3-201ENST00000375880 PRXQ9BXM0 1461 aa17.5■□□□□ 0.39
AL662899.3-201ENST00000375880 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
AL662899.3-201ENST00000375880 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
AL662899.3-201ENST00000375880 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
AL662899.3-201ENST00000375880 FBLN2P98095 1184 aa17.44■□□□□ 0.38
AL662899.3-201ENST00000375880 CARMIL1Q5VZK9 1371 aa17.42■□□□□ 0.38
AL662899.3-201ENST00000375880 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms