RNA–Protein interactions for RNA: ENST00000375400.7

SVIL-203, Transcript of supervillin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SVIL, Length 6,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-203ENST00000375400 DCAF8L2P0C7V8 631 aa16.8■□□□□ 0.28
SVIL-203ENST00000375400 NISCHQ9Y2I1 1504 aa16.69■□□□□ 0.26
SVIL-203ENST00000375400 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
SVIL-203ENST00000375400 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
SVIL-203ENST00000375400 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
SVIL-203ENST00000375400 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
SVIL-203ENST00000375400 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
SVIL-203ENST00000375400 MYT1Q01538 1121 aa16.08■□□□□ 0.16
SVIL-203ENST00000375400 PCGF6Q9BYE7 350 aa15.99■□□□□ 0.15
SVIL-203ENST00000375400 ZEB1P37275 1124 aaPredicted RBP15.72■□□□□ 0.11
SVIL-203ENST00000375400 CENPBP07199 599 aaPredicted RBP15.67■□□□□ 0.1
SVIL-203ENST00000375400 TTBK1Q5TCY1 1321 aaPredicted RBP15.66■□□□□ 0.1
SVIL-203ENST00000375400 HRCP23327 699 aa15.65■□□□□ 0.1
SVIL-203ENST00000375400 CCER1Q8TC90 406 aaPredicted RBP15.61■□□□□ 0.09
SVIL-203ENST00000375400 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
SVIL-203ENST00000375400 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
SVIL-203ENST00000375400 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
SVIL-203ENST00000375400 PPARGC1BQ86YN6 1023 aaKnown RBP15.31■□□□□ 0.04
SVIL-203ENST00000375400 APLP2Q06481 763 aa15.28■□□□□ 0.04
SVIL-203ENST00000375400 NEFLP07196 543 aa15.23■□□□□ 0.03
SVIL-203ENST00000375400 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
SVIL-203ENST00000375400 RANGAP1P46060 587 aaPredicted RBP15.1■□□□□ 0.01
SVIL-203ENST00000375400 DAXXQ9UER7 740 aaPredicted RBP15.07■□□□□ 0
SVIL-203ENST00000375400 CHIC1Q5VXU3 224 aa15.04■□□□□ -0
SVIL-203ENST00000375400 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
SVIL-203ENST00000375400 CNGB1Q14028 1251 aaPredicted RBP14.87□□□□□ -0.03
SVIL-203ENST00000375400 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
SVIL-203ENST00000375400 ATP1B4Q9UN42 357 aaPredicted RBP14.85□□□□□ -0.03
SVIL-203ENST00000375400 GTF3C3Q9Y5Q9 886 aa14.85□□□□□ -0.03
SVIL-203ENST00000375400 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
SVIL-203ENST00000375400 RTL5Q5HYW3 569 aaPredicted RBP14.81□□□□□ -0.04
SVIL-203ENST00000375400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
SVIL-203ENST00000375400 POLR3GLQ9BT43 218 aa14.74□□□□□ -0.05
SVIL-203ENST00000375400 ZNF316A6NFI3 1004 aaPredicted RBP14.73□□□□□ -0.05
SVIL-203ENST00000375400 ACIN1Q9UKV3 1341 aaKnown RBP14.72□□□□□ -0.05
SVIL-203ENST00000375400 EIF5BO60841 1220 aaKnown RBP14.65□□□□□ -0.06
SVIL-203ENST00000375400 BCANQ96GW7 911 aa14.61□□□□□ -0.07
SVIL-203ENST00000375400 CLSPNQ9HAW4 1339 aa14.58□□□□□ -0.08
SVIL-203ENST00000375400 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
SVIL-203ENST00000375400 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
SVIL-203ENST00000375400 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.08
SVIL-203ENST00000375400 BCL11AQ9H165 835 aa14.43□□□□□ -0.1
SVIL-203ENST00000375400 ITGAEP38570 1179 aa14.42□□□□□ -0.1
SVIL-203ENST00000375400 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
SVIL-203ENST00000375400 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
SVIL-203ENST00000375400 CDK11AQ9UQ88 783 aaPredicted RBP14.3□□□□□ -0.12
SVIL-203ENST00000375400 MYO15BQ96JP2 1530 aa14.28□□□□□ -0.12
SVIL-203ENST00000375400 ABCC9O60706 1549 aa14.25□□□□□ -0.13
SVIL-203ENST00000375400 MYT1LQ9UL68 1186 aa14.24□□□□□ -0.13
SVIL-203ENST00000375400 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
SVIL-203ENST00000375400 NPM2Q86SE8 214 aaKnown RBP14.22□□□□□ -0.13
SVIL-203ENST00000375400 ANP32CO43423 234 aa14.19□□□□□ -0.14
SVIL-203ENST00000375400 ARXQ96QS3 562 aa14.18□□□□□ -0.14
SVIL-203ENST00000375400 GLIPR1L2Q4G1C9 344 aa14.16□□□□□ -0.14
SVIL-203ENST00000375400 FKBP8Q14318 412 aa14.12□□□□□ -0.15
SVIL-203ENST00000375400 NBR1Q14596 966 aa14.1□□□□□ -0.15
SVIL-203ENST00000375400 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
SVIL-203ENST00000375400 FAM50AQ14320 339 aaKnown RBP14.06□□□□□ -0.16
SVIL-203ENST00000375400 MIER1Q8N108 512 aa14.04□□□□□ -0.16
SVIL-203ENST00000375400 ANP32EQ9BTT0 268 aa14.03□□□□□ -0.16
SVIL-203ENST00000375400 ANP32AP39687 249 aaKnown RBP14.03□□□□□ -0.16
SVIL-203ENST00000375400 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
SVIL-203ENST00000375400 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
SVIL-203ENST00000375400 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
SVIL-203ENST00000375400 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
SVIL-203ENST00000375400 ANP32BQ92688 251 aaKnown RBP13.93□□□□□ -0.18
SVIL-203ENST00000375400 CANXP27824 592 aaKnown RBP13.93□□□□□ -0.18
SVIL-203ENST00000375400 TRIM52Q96A61 297 aa13.9□□□□□ -0.18
SVIL-203ENST00000375400 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
SVIL-203ENST00000375400 RTN4Q9NQC3 1192 aaKnown RBP13.86□□□□□ -0.19
SVIL-203ENST00000375400 HSP90AA1P07900 732 aaKnown RBP13.84□□□□□ -0.19
SVIL-203ENST00000375400 DDX10Q13206 875 aaKnown RBP13.84□□□□□ -0.19
SVIL-203ENST00000375400 ZNF326Q5BKZ1 582 aaKnown RBP13.82□□□□□ -0.2
SVIL-203ENST00000375400 HNRNPUQ00839 825 aaKnown RBP eCLIP13.82□□□□□ -0.2
SVIL-203ENST00000375400 FBLN2P98095 1184 aa13.81□□□□□ -0.2
SVIL-203ENST00000375400 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
SVIL-203ENST00000375400 SCRIBQ14160 1630 aa13.73□□□□□ -0.21
SVIL-203ENST00000375400 IRX6P78412 446 aaPredicted RBP13.73□□□□□ -0.21
SVIL-203ENST00000375400 TONSLQ96HA7 1378 aa13.7□□□□□ -0.22
SVIL-203ENST00000375400 FAM9BQ8IZU0 186 aa13.7□□□□□ -0.22
SVIL-203ENST00000375400 CCDC136Q96JN2 1154 aa13.68□□□□□ -0.22
SVIL-203ENST00000375400 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
SVIL-203ENST00000375400 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
SVIL-203ENST00000375400 TPRNQ4KMQ1 711 aa13.64□□□□□ -0.23
SVIL-203ENST00000375400 TNNT2P45379 298 aaPredicted RBP13.62□□□□□ -0.23
SVIL-203ENST00000375400 NAP1L5Q96NT1 182 aaPredicted RBP13.61□□□□□ -0.23
SVIL-203ENST00000375400 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
SVIL-203ENST00000375400 ARID4BQ4LE39 1312 aaPredicted RBP13.6□□□□□ -0.23
SVIL-203ENST00000375400 CDK11BP21127 795 aaKnown RBP13.59□□□□□ -0.23
SVIL-203ENST00000375400 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
SVIL-203ENST00000375400 HIRIP3Q9BW71 556 aaPredicted RBP13.57□□□□□ -0.24
SVIL-203ENST00000375400 CLIP1P30622 1438 aa13.56□□□□□ -0.24
SVIL-203ENST00000375400 UPF2Q9HAU5 1272 aaKnown RBP13.56□□□□□ -0.24
SVIL-203ENST00000375400 TRIM44Q96DX7 344 aaPredicted RBP13.55□□□□□ -0.24
SVIL-203ENST00000375400 RBM19Q9Y4C8 960 aaKnown RBP13.55□□□□□ -0.24
SVIL-203ENST00000375400 MRS2Q9HD23 443 aa13.55□□□□□ -0.24
SVIL-203ENST00000375400 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
SVIL-203ENST00000375400 NOP58Q9Y2X3 529 aaKnown RBP13.55□□□□□ -0.24
SVIL-203ENST00000375400 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
SVIL-203ENST00000375400 ESF1Q9H501 851 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms