RNA–Protein interactions for RNA: ENST00000375151.4

TSR2-201, Transcript of TSR2, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR2, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR2-201ENST00000375151 NISCHQ9Y2I1 1504 aa43.97■■■■■ 4.63
TSR2-201ENST00000375151 CCDC180Q9P1Z9 1646 aa39.22■■■■□ 3.87
TSR2-201ENST00000375151 ABCC9O60706 1549 aa39.14■■■■□ 3.86
TSR2-201ENST00000375151 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
TSR2-201ENST00000375151 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
TSR2-201ENST00000375151 NACADO15069 1562 aa36.99■■■■□ 3.51
TSR2-201ENST00000375151 PABPN1Q86U42 306 aaKnown RBP eCLIP36.57■■■■□ 3.44
TSR2-201ENST00000375151 UNC13AQ9UPW8 1703 aa36.56■■■■□ 3.44
TSR2-201ENST00000375151 DNAJC5BQ9UF47 199 aa36.51■■■■□ 3.44
TSR2-201ENST00000375151 ZCCHC6Q5VYS8 1495 aaKnown RBP36.48■■■■□ 3.43
TSR2-201ENST00000375151 MYO15BQ96JP2 1530 aa36.47■■■■□ 3.43
TSR2-201ENST00000375151 BICRAQ9NZM4 1560 aa36.22■■■■□ 3.39
TSR2-201ENST00000375151 DCAF1Q9Y4B6 1507 aa36.17■■■■□ 3.38
TSR2-201ENST00000375151 SCRIBQ14160 1630 aa35.98■■■■□ 3.35
TSR2-201ENST00000375151 SHROOM4Q9ULL8 1493 aa35.45■■■■□ 3.27
TSR2-201ENST00000375151 CC2D2AQ9P2K1 1620 aa35.31■■■■□ 3.24
TSR2-201ENST00000375151 EIF4G1Q04637 1599 aaKnown RBP35.26■■■■□ 3.24
TSR2-201ENST00000375151 CECR2Q9BXF3 1484 aa35.13■■■■□ 3.21
TSR2-201ENST00000375151 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
TSR2-201ENST00000375151 ATAD2BQ9ULI0 1458 aa34.19■■■■□ 3.06
TSR2-201ENST00000375151 NCAPD3P42695 1498 aa34.17■■■■□ 3.06
TSR2-201ENST00000375151 BAZ1AQ9NRL2 1556 aaPredicted RBP34.05■■■■□ 3.04
TSR2-201ENST00000375151 SMARCA2P51531 1590 aa34.04■■■■□ 3.04
TSR2-201ENST00000375151 MROH2BQ7Z745 1585 aa33.98■■■■□ 3.03
TSR2-201ENST00000375151 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
TSR2-201ENST00000375151 BAZ1BQ9UIG0 1483 aaKnown RBP33.87■■■■□ 3.01
TSR2-201ENST00000375151 PEG3Q9GZU2 1588 aa33.79■■■■□ 3
TSR2-201ENST00000375151 NESP48681 1621 aa33.75■■■□□ 2.99
TSR2-201ENST00000375151 ERCC6Q03468 1493 aa33.69■■■□□ 2.98
TSR2-201ENST00000375151 WIZO95785 1651 aa33.63■■■□□ 2.97
TSR2-201ENST00000375151 CUX2O14529 1486 aa33.37■■■□□ 2.93
TSR2-201ENST00000375151 LAMC3Q9Y6N6 1575 aa33.35■■■□□ 2.93
TSR2-201ENST00000375151 RSF1Q96T23 1441 aaPredicted RBP33.35■■■□□ 2.93
TSR2-201ENST00000375151 KIF21AQ7Z4S6 1674 aa33.29■■■□□ 2.92
TSR2-201ENST00000375151 THOC2Q8NI27 1593 aaKnown RBP33.21■■■□□ 2.91
TSR2-201ENST00000375151 CADPSQ9ULU8 1353 aa33.2■■■□□ 2.9
TSR2-201ENST00000375151 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
TSR2-201ENST00000375151 DNAJC5Q9H3Z4 198 aa33.11■■■□□ 2.89
TSR2-201ENST00000375151 TOP2AP11388 1531 aaKnown RBP33.08■■■□□ 2.89
TSR2-201ENST00000375151 MRC2Q9UBG0 1479 aa32.88■■■□□ 2.85
TSR2-201ENST00000375151 CFTRP13569 1480 aa32.87■■■□□ 2.85
TSR2-201ENST00000375151 FANCD2Q9BXW9 1451 aa32.86■■■□□ 2.85
TSR2-201ENST00000375151 CEP164Q9UPV0 1460 aa32.84■■■□□ 2.85
TSR2-201ENST00000375151 CCDC88BA6NC98 1476 aa32.79■■■□□ 2.84
TSR2-201ENST00000375151 WDR62O43379 1518 aa32.78■■■□□ 2.84
TSR2-201ENST00000375151 URB2Q14146 1524 aaKnown RBP32.61■■■□□ 2.81
TSR2-201ENST00000375151 PRDM2Q13029 1718 aa32.6■■■□□ 2.81
TSR2-201ENST00000375151 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
TSR2-201ENST00000375151 TOPBP1Q92547 1522 aa32.28■■■□□ 2.76
TSR2-201ENST00000375151 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.75
TSR2-201ENST00000375151 DNMBPQ6XZF7 1577 aa32.15■■■□□ 2.74
TSR2-201ENST00000375151 IFT140Q96RY7 1462 aa32.12■■■□□ 2.73
TSR2-201ENST00000375151 ABCC8Q09428 1581 aa32.07■■■□□ 2.73
TSR2-201ENST00000375151 OSCARQ8IYS5 282 aa32.02■■■□□ 2.72
TSR2-201ENST00000375151 TRIM41Q8WV44 630 aa31.99■■■□□ 2.71
TSR2-201ENST00000375151 EIF4G3O43432 1585 aaKnown RBP31.97■■■□□ 2.71
TSR2-201ENST00000375151 POLA1P09884 1462 aaPredicted RBP31.97■■■□□ 2.71
TSR2-201ENST00000375151 TARBP1Q13395 1621 aaKnown RBP31.97■■■□□ 2.71
TSR2-201ENST00000375151 RAD54L2Q9Y4B4 1467 aa31.96■■■□□ 2.71
TSR2-201ENST00000375151 AQRO60306 1485 aaKnown RBP eCLIP31.95■■■□□ 2.711e-6■■■■■ 31.7
TSR2-201ENST00000375151 CUX1P39880 1505 aa31.89■■■□□ 2.7
TSR2-201ENST00000375151 SOGA1O94964 1423 aa31.84■■■□□ 2.69
TSR2-201ENST00000375151 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
TSR2-201ENST00000375151 TDRD9Q8NDG6 1382 aaKnown RBP31.82■■■□□ 2.68
TSR2-201ENST00000375151 FBLN2P98095 1184 aa31.75■■■□□ 2.67
TSR2-201ENST00000375151 CHD1O14646 1710 aa31.74■■■□□ 2.67
TSR2-201ENST00000375151 RIMBP3CA6NJZ7 1639 aa31.63■■■□□ 2.65
TSR2-201ENST00000375151 RIMBP3BA6NNM3 1639 aa31.63■■■□□ 2.65
TSR2-201ENST00000375151 RIMBP3Q9UFD9 1639 aa31.63■■■□□ 2.65
TSR2-201ENST00000375151 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
TSR2-201ENST00000375151 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
TSR2-201ENST00000375151 ARHGEF11O15085 1522 aa31.52■■■□□ 2.64
TSR2-201ENST00000375151 GRIN2BQ13224 1484 aa31.47■■■□□ 2.63
TSR2-201ENST00000375151 SYNJ1O43426 1573 aa31.46■■■□□ 2.63
TSR2-201ENST00000375151 PBRM1Q86U86 1689 aa31.46■■■□□ 2.63
TSR2-201ENST00000375151 CHMP7Q8WUX9 453 aaPredicted RBP31.45■■■□□ 2.63
TSR2-201ENST00000375151 GAPVD1Q14C86 1478 aa31.44■■■□□ 2.62
TSR2-201ENST00000375151 WRNQ14191 1432 aaPredicted RBP eCLIP31.43■■■□□ 2.625e-6■■■■■ 29.2
TSR2-201ENST00000375151 ABCA10Q8WWZ4 1543 aa31.42■■■□□ 2.62
TSR2-201ENST00000375151 BIVM-ERCC5R4GMW8 1640 aa31.4■■■□□ 2.62
TSR2-201ENST00000375151 MAGI1Q96QZ7 1491 aaPredicted RBP31.39■■■□□ 2.62
TSR2-201ENST00000375151 TOP2BQ02880 1626 aa31.39■■■□□ 2.62
TSR2-201ENST00000375151 CYB5RLQ6IPT4 315 aa31.38■■■□□ 2.61
TSR2-201ENST00000375151 ABCA5Q8WWZ7 1642 aa31.38■■■□□ 2.61
TSR2-201ENST00000375151 SYNJ2O15056 1496 aa31.32■■■□□ 2.6
TSR2-201ENST00000375151 CLASP1Q7Z460 1538 aa31.27■■■□□ 2.6
TSR2-201ENST00000375151 ARAP1Q96P48 1450 aa31.26■■■□□ 2.59
TSR2-201ENST00000375151 ADAMTS12P58397 1594 aa31.12■■■□□ 2.57
TSR2-201ENST00000375151 GRIN2AQ12879 1464 aa31.09■■■□□ 2.57
TSR2-201ENST00000375151 CEP170Q5SW79 1584 aa31.03■■■□□ 2.56
TSR2-201ENST00000375151 FHAD1B1AJZ9 1412 aa31.01■■■□□ 2.56
TSR2-201ENST00000375151 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
TSR2-201ENST00000375151 ERCC6L2Q5T890 1561 aa30.97■■■□□ 2.55
TSR2-201ENST00000375151 TRHP20396 242 aaPredicted RBP30.93■■■□□ 2.54
TSR2-201ENST00000375151 NUP160Q12769 1436 aa30.93■■■□□ 2.54
TSR2-201ENST00000375151 IGF1RP08069 1367 aa30.79■■■□□ 2.52
TSR2-201ENST00000375151 KIF27Q86VH2 1401 aa30.78■■■□□ 2.52
TSR2-201ENST00000375151 SHROOM2Q13796 1616 aa30.77■■■□□ 2.52
TSR2-201ENST00000375151 JPH4Q96JJ6 628 aa30.72■■■□□ 2.51
TSR2-201ENST00000375151 PRG4Q92954 1404 aaPredicted RBP30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms