RNA–Protein interactions for RNA: ENST00000374648.7

ZNF248-202, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 1,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-202ENST00000374648 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
ZNF248-202ENST00000374648 ABCC9O60706 1549 aa32.86■■■□□ 2.85
ZNF248-202ENST00000374648 CCDC180Q9P1Z9 1646 aa32.64■■■□□ 2.82
ZNF248-202ENST00000374648 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
ZNF248-202ENST00000374648 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
ZNF248-202ENST00000374648 DNAJC5BQ9UF47 199 aa30.92■■■□□ 2.54
ZNF248-202ENST00000374648 NACADO15069 1562 aa30.9■■■□□ 2.54
ZNF248-202ENST00000374648 PABPN1Q86U42 306 aaKnown RBP eCLIP30.66■■■□□ 2.5
ZNF248-202ENST00000374648 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
ZNF248-202ENST00000374648 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
ZNF248-202ENST00000374648 BICRAQ9NZM4 1560 aa30.29■■■□□ 2.44
ZNF248-202ENST00000374648 ZCCHC6Q5VYS8 1495 aaKnown RBP30.21■■■□□ 2.43
ZNF248-202ENST00000374648 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
ZNF248-202ENST00000374648 SCRIBQ14160 1630 aa29.89■■■□□ 2.38
ZNF248-202ENST00000374648 SHROOM4Q9ULL8 1493 aa29.71■■■□□ 2.35
ZNF248-202ENST00000374648 CC2D2AQ9P2K1 1620 aa29.61■■■□□ 2.33
ZNF248-202ENST00000374648 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
ZNF248-202ENST00000374648 EIF4G1Q04637 1599 aaKnown RBP29.53■■■□□ 2.32
ZNF248-202ENST00000374648 NCAPD3P42695 1498 aa28.57■■■□□ 2.16
ZNF248-202ENST00000374648 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
ZNF248-202ENST00000374648 SMARCA4P51532 1647 aa28.45■■■□□ 2.14
ZNF248-202ENST00000374648 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
ZNF248-202ENST00000374648 DNAJC5Q9H3Z4 198 aa28.32■■■□□ 2.12
ZNF248-202ENST00000374648 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
ZNF248-202ENST00000374648 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
ZNF248-202ENST00000374648 BAZ1AQ9NRL2 1556 aaPredicted RBP28.28■■■□□ 2.12
ZNF248-202ENST00000374648 NESP48681 1621 aa28.23■■■□□ 2.11
ZNF248-202ENST00000374648 BAZ1BQ9UIG0 1483 aaKnown RBP28.22■■■□□ 2.11
ZNF248-202ENST00000374648 CUX2O14529 1486 aa28.2■■■□□ 2.1
ZNF248-202ENST00000374648 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
ZNF248-202ENST00000374648 PEG3Q9GZU2 1588 aa28.12■■■□□ 2.09
ZNF248-202ENST00000374648 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.05
ZNF248-202ENST00000374648 THOC2Q8NI27 1593 aaKnown RBP27.85■■■□□ 2.05
ZNF248-202ENST00000374648 WIZO95785 1651 aa27.81■■■□□ 2.04
ZNF248-202ENST00000374648 KIF21AQ7Z4S6 1674 aa27.79■■■□□ 2.04
ZNF248-202ENST00000374648 PDS5BQ9NTI5 1447 aa27.76■■■□□ 2.04
ZNF248-202ENST00000374648 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
ZNF248-202ENST00000374648 RSF1Q96T23 1441 aaPredicted RBP27.57■■■□□ 2
ZNF248-202ENST00000374648 MRC2Q9UBG0 1479 aa27.55■■■□□ 2
ZNF248-202ENST00000374648 WDR62O43379 1518 aa27.46■■□□□ 1.99
ZNF248-202ENST00000374648 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
ZNF248-202ENST00000374648 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
ZNF248-202ENST00000374648 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
ZNF248-202ENST00000374648 CFTRP13569 1480 aa27.38■■□□□ 1.97
ZNF248-202ENST00000374648 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
ZNF248-202ENST00000374648 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
ZNF248-202ENST00000374648 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
ZNF248-202ENST00000374648 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
ZNF248-202ENST00000374648 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
ZNF248-202ENST00000374648 ZNF608Q9ULD9 1512 aaPredicted RBP26.92■■□□□ 1.9
ZNF248-202ENST00000374648 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
ZNF248-202ENST00000374648 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
ZNF248-202ENST00000374648 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
ZNF248-202ENST00000374648 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
ZNF248-202ENST00000374648 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
ZNF248-202ENST00000374648 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.86
ZNF248-202ENST00000374648 TARBP1Q13395 1621 aaKnown RBP26.64■■□□□ 1.85
ZNF248-202ENST00000374648 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
ZNF248-202ENST00000374648 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
ZNF248-202ENST00000374648 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
ZNF248-202ENST00000374648 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
ZNF248-202ENST00000374648 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
ZNF248-202ENST00000374648 FBLN2P98095 1184 aa26.55■■□□□ 1.84
ZNF248-202ENST00000374648 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
ZNF248-202ENST00000374648 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
ZNF248-202ENST00000374648 SOGA1O94964 1423 aa26.53■■□□□ 1.84
ZNF248-202ENST00000374648 CHD1O14646 1710 aa26.51■■□□□ 1.83
ZNF248-202ENST00000374648 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
ZNF248-202ENST00000374648 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
ZNF248-202ENST00000374648 CUX1P39880 1505 aa26.44■■□□□ 1.82
ZNF248-202ENST00000374648 CYB5RLQ6IPT4 315 aa26.44■■□□□ 1.82
ZNF248-202ENST00000374648 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
ZNF248-202ENST00000374648 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
ZNF248-202ENST00000374648 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
ZNF248-202ENST00000374648 WDR97A6NE52 1622 aa26.25■■□□□ 1.79
ZNF248-202ENST00000374648 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
ZNF248-202ENST00000374648 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
ZNF248-202ENST00000374648 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
ZNF248-202ENST00000374648 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
ZNF248-202ENST00000374648 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
ZNF248-202ENST00000374648 TRHP20396 242 aaPredicted RBP26.15■■□□□ 1.78
ZNF248-202ENST00000374648 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
ZNF248-202ENST00000374648 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
ZNF248-202ENST00000374648 ABCA10Q8WWZ4 1543 aa26.12■■□□□ 1.77
ZNF248-202ENST00000374648 ABCA5Q8WWZ7 1642 aa26.08■■□□□ 1.77
ZNF248-202ENST00000374648 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
ZNF248-202ENST00000374648 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
ZNF248-202ENST00000374648 BIVM-ERCC5R4GMW8 1640 aa25.95■■□□□ 1.74
ZNF248-202ENST00000374648 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
ZNF248-202ENST00000374648 ADAMTS12P58397 1594 aa25.9■■□□□ 1.74
ZNF248-202ENST00000374648 ERCC6L2Q5T890 1561 aa25.88■■□□□ 1.73
ZNF248-202ENST00000374648 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
ZNF248-202ENST00000374648 FHAD1B1AJZ9 1412 aa25.83■■□□□ 1.73
ZNF248-202ENST00000374648 NUP160Q12769 1436 aa25.82■■□□□ 1.72
ZNF248-202ENST00000374648 ERICH3Q5RHP9 1530 aa25.76■■□□□ 1.71
ZNF248-202ENST00000374648 SHROOM2Q13796 1616 aa25.69■■□□□ 1.7
ZNF248-202ENST00000374648 PRG4Q92954 1404 aaPredicted RBP25.63■■□□□ 1.69
ZNF248-202ENST00000374648 JPH4Q96JJ6 628 aa25.63■■□□□ 1.69
ZNF248-202ENST00000374648 IGF1RP08069 1367 aa25.53■■□□□ 1.68
ZNF248-202ENST00000374648 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms