RNA–Protein interactions for RNA: ENST00000374484.8

CUTA-201, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 3

Gene CUTA, Length 658 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-201ENST00000374484 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
CUTA-201ENST00000374484 CCDC180Q9P1Z9 1646 aa30.28■■■□□ 2.44
CUTA-201ENST00000374484 ABCC9O60706 1549 aa29.56■■■□□ 2.32
CUTA-201ENST00000374484 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
CUTA-201ENST00000374484 NACADO15069 1562 aa28.43■■■□□ 2.14
CUTA-201ENST00000374484 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
CUTA-201ENST00000374484 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
CUTA-201ENST00000374484 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
CUTA-201ENST00000374484 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
CUTA-201ENST00000374484 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
CUTA-201ENST00000374484 BICRAQ9NZM4 1560 aa27.66■■■□□ 2.02
CUTA-201ENST00000374484 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
CUTA-201ENST00000374484 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
CUTA-201ENST00000374484 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
CUTA-201ENST00000374484 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
CUTA-201ENST00000374484 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
CUTA-201ENST00000374484 CC2D2AQ9P2K1 1620 aa26.85■■□□□ 1.89
CUTA-201ENST00000374484 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
CUTA-201ENST00000374484 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
CUTA-201ENST00000374484 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
CUTA-201ENST00000374484 NCAPD3P42695 1498 aa26.2■■□□□ 1.78
CUTA-201ENST00000374484 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
CUTA-201ENST00000374484 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
CUTA-201ENST00000374484 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
CUTA-201ENST00000374484 HMGXB3Q12766 1538 aa26.11■■□□□ 1.77
CUTA-201ENST00000374484 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
CUTA-201ENST00000374484 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
CUTA-201ENST00000374484 WIZO95785 1651 aa25.74■■□□□ 1.71
CUTA-201ENST00000374484 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
CUTA-201ENST00000374484 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
CUTA-201ENST00000374484 NESP48681 1621 aa25.55■■□□□ 1.68
CUTA-201ENST00000374484 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
CUTA-201ENST00000374484 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
CUTA-201ENST00000374484 CUX2O14529 1486 aa25.43■■□□□ 1.66
CUTA-201ENST00000374484 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
CUTA-201ENST00000374484 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
CUTA-201ENST00000374484 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
CUTA-201ENST00000374484 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
CUTA-201ENST00000374484 CFTRP13569 1480 aa25.22■■□□□ 1.63
CUTA-201ENST00000374484 PRDM2Q13029 1718 aa25.2■■□□□ 1.63
CUTA-201ENST00000374484 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
CUTA-201ENST00000374484 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
CUTA-201ENST00000374484 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.6
CUTA-201ENST00000374484 CEP164Q9UPV0 1460 aa25.08■■□□□ 1.6
CUTA-201ENST00000374484 WDR62O43379 1518 aa25.07■■□□□ 1.6
CUTA-201ENST00000374484 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
CUTA-201ENST00000374484 DNAJC5Q9H3Z4 198 aa24.8■■□□□ 1.56
CUTA-201ENST00000374484 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
CUTA-201ENST00000374484 TOPBP1Q92547 1522 aa24.67■■□□□ 1.54
CUTA-201ENST00000374484 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
CUTA-201ENST00000374484 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
CUTA-201ENST00000374484 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
CUTA-201ENST00000374484 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
CUTA-201ENST00000374484 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
CUTA-201ENST00000374484 ZNF608Q9ULD9 1512 aaPredicted RBP24.43■■□□□ 1.5
CUTA-201ENST00000374484 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
CUTA-201ENST00000374484 CUX1P39880 1505 aa24.4■■□□□ 1.5
CUTA-201ENST00000374484 WDR97A6NE52 1622 aa24.36■■□□□ 1.49
CUTA-201ENST00000374484 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
CUTA-201ENST00000374484 SOGA1O94964 1423 aa24.28■■□□□ 1.48
CUTA-201ENST00000374484 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
CUTA-201ENST00000374484 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
CUTA-201ENST00000374484 AQRO60306 1485 aaKnown RBP eCLIP24.24■■□□□ 1.473e-9■■■■■ 30.8
CUTA-201ENST00000374484 OSCARQ8IYS5 282 aa24.21■■□□□ 1.47
CUTA-201ENST00000374484 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
CUTA-201ENST00000374484 CHD1O14646 1710 aa24.18■■□□□ 1.46
CUTA-201ENST00000374484 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
CUTA-201ENST00000374484 SYNJ1O43426 1573 aa24.14■■□□□ 1.45
CUTA-201ENST00000374484 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.456e-6■■■□□ 16.7
CUTA-201ENST00000374484 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
CUTA-201ENST00000374484 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
CUTA-201ENST00000374484 ABCA5Q8WWZ7 1642 aa24.11■■□□□ 1.45
CUTA-201ENST00000374484 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
CUTA-201ENST00000374484 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
CUTA-201ENST00000374484 SNAPC4Q5SXM2 1469 aa24.04■■□□□ 1.44
CUTA-201ENST00000374484 GAPVD1Q14C86 1478 aa24.03■■□□□ 1.44
CUTA-201ENST00000374484 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
CUTA-201ENST00000374484 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
CUTA-201ENST00000374484 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
CUTA-201ENST00000374484 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
CUTA-201ENST00000374484 CLASP1Q7Z460 1538 aa23.91■■□□□ 1.42
CUTA-201ENST00000374484 ARHGEF11O15085 1522 aa23.9■■□□□ 1.42
CUTA-201ENST00000374484 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
CUTA-201ENST00000374484 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
CUTA-201ENST00000374484 FBLN2P98095 1184 aa23.85■■□□□ 1.41
CUTA-201ENST00000374484 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.41
CUTA-201ENST00000374484 GRIN2AQ12879 1464 aa23.78■■□□□ 1.4
CUTA-201ENST00000374484 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
CUTA-201ENST00000374484 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
CUTA-201ENST00000374484 NUP160Q12769 1436 aa23.7■■□□□ 1.38
CUTA-201ENST00000374484 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
CUTA-201ENST00000374484 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
CUTA-201ENST00000374484 CUL7Q14999 1698 aa23.65■■□□□ 1.38
CUTA-201ENST00000374484 SHROOM2Q13796 1616 aa23.64■■□□□ 1.38
CUTA-201ENST00000374484 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
CUTA-201ENST00000374484 IGF1RP08069 1367 aa23.56■■□□□ 1.36
CUTA-201ENST00000374484 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
CUTA-201ENST00000374484 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
CUTA-201ENST00000374484 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
CUTA-201ENST00000374484 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms