RNA–Protein interactions for RNA: ENST00000373703.4

PEF1-201, Transcript of penta-EF-hand domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEF1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-201ENST00000373703 NISCHQ9Y2I1 1504 aa35.1■■■■□ 3.21
PEF1-201ENST00000373703 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
PEF1-201ENST00000373703 ABCC9O60706 1549 aa30.03■■■□□ 2.4
PEF1-201ENST00000373703 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
PEF1-201ENST00000373703 DCAF8L2P0C7V8 631 aa29.31■■■□□ 2.28
PEF1-201ENST00000373703 NACADO15069 1562 aa29.04■■■□□ 2.24
PEF1-201ENST00000373703 DCAF1Q9Y4B6 1507 aa28.99■■■□□ 2.23
PEF1-201ENST00000373703 RB1CC1Q8TDY2 1594 aa28.98■■■□□ 2.23
PEF1-201ENST00000373703 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
PEF1-201ENST00000373703 SCRIBQ14160 1630 aa28.37■■■□□ 2.13
PEF1-201ENST00000373703 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
PEF1-201ENST00000373703 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
PEF1-201ENST00000373703 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
PEF1-201ENST00000373703 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
PEF1-201ENST00000373703 CECR2Q9BXF3 1484 aa27.35■■□□□ 1.97
PEF1-201ENST00000373703 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
PEF1-201ENST00000373703 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
PEF1-201ENST00000373703 BAZ1AQ9NRL2 1556 aaPredicted RBP27.15■■□□□ 1.94
PEF1-201ENST00000373703 SMARCA4P51532 1647 aa27.14■■□□□ 1.93
PEF1-201ENST00000373703 CC2D2AQ9P2K1 1620 aa27.14■■□□□ 1.93
PEF1-201ENST00000373703 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
PEF1-201ENST00000373703 RSF1Q96T23 1441 aaPredicted RBP26.92■■□□□ 1.9
PEF1-201ENST00000373703 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
PEF1-201ENST00000373703 SMARCA2P51531 1590 aa26.86■■□□□ 1.89
PEF1-201ENST00000373703 PEG3Q9GZU2 1588 aa26.83■■□□□ 1.89
PEF1-201ENST00000373703 WIZO95785 1651 aa26.81■■□□□ 1.88
PEF1-201ENST00000373703 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
PEF1-201ENST00000373703 BAZ1BQ9UIG0 1483 aaKnown RBP26.71■■□□□ 1.87
PEF1-201ENST00000373703 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
PEF1-201ENST00000373703 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.85
PEF1-201ENST00000373703 TOP2AP11388 1531 aaKnown RBP26.51■■□□□ 1.83
PEF1-201ENST00000373703 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
PEF1-201ENST00000373703 NESP48681 1621 aa26.1■■□□□ 1.77
PEF1-201ENST00000373703 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
PEF1-201ENST00000373703 LAMC3Q9Y6N6 1575 aa26.02■■□□□ 1.76
PEF1-201ENST00000373703 CFTRP13569 1480 aa25.99■■□□□ 1.75
PEF1-201ENST00000373703 PDS5BQ9NTI5 1447 aa25.87■■□□□ 1.73
PEF1-201ENST00000373703 ERCC6Q03468 1493 aa25.83■■□□□ 1.73
PEF1-201ENST00000373703 FANCD2Q9BXW9 1451 aa25.78■■□□□ 1.72
PEF1-201ENST00000373703 PRDM2Q13029 1718 aa25.75■■□□□ 1.71
PEF1-201ENST00000373703 KIF21AQ7Z4S6 1674 aa25.75■■□□□ 1.71
PEF1-201ENST00000373703 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.7
PEF1-201ENST00000373703 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
PEF1-201ENST00000373703 THOC2Q8NI27 1593 aaKnown RBP25.55■■□□□ 1.68
PEF1-201ENST00000373703 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
PEF1-201ENST00000373703 WDR62O43379 1518 aa25.46■■□□□ 1.67
PEF1-201ENST00000373703 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
PEF1-201ENST00000373703 TOPBP1Q92547 1522 aa25.41■■□□□ 1.66
PEF1-201ENST00000373703 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.65
PEF1-201ENST00000373703 CUX1P39880 1505 aa25.37■■□□□ 1.65
PEF1-201ENST00000373703 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
PEF1-201ENST00000373703 CUX2O14529 1486 aa25.35■■□□□ 1.65
PEF1-201ENST00000373703 SYNJ1O43426 1573 aa25.28■■□□□ 1.64
PEF1-201ENST00000373703 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
PEF1-201ENST00000373703 FGD5Q6ZNL6 1462 aa25.23■■□□□ 1.63
PEF1-201ENST00000373703 POLA1P09884 1462 aaPredicted RBP25.22■■□□□ 1.63
PEF1-201ENST00000373703 BIVM-ERCC5R4GMW8 1640 aa25.21■■□□□ 1.63
PEF1-201ENST00000373703 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
PEF1-201ENST00000373703 SOGA1O94964 1423 aa25.15■■□□□ 1.62
PEF1-201ENST00000373703 IFT140Q96RY7 1462 aa25.14■■□□□ 1.61
PEF1-201ENST00000373703 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
PEF1-201ENST00000373703 TARBP1Q13395 1621 aaKnown RBP25.07■■□□□ 1.6
PEF1-201ENST00000373703 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
PEF1-201ENST00000373703 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
PEF1-201ENST00000373703 ABCA10Q8WWZ4 1543 aa24.98■■□□□ 1.59
PEF1-201ENST00000373703 TDRD9Q8NDG6 1382 aaKnown RBP24.98■■□□□ 1.59
PEF1-201ENST00000373703 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.591e-7■■■■■ 29.4
PEF1-201ENST00000373703 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
PEF1-201ENST00000373703 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
PEF1-201ENST00000373703 GAPVD1Q14C86 1478 aa24.85■■□□□ 1.57
PEF1-201ENST00000373703 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
PEF1-201ENST00000373703 KIF27Q86VH2 1401 aa24.8■■□□□ 1.56
PEF1-201ENST00000373703 GRIN2BQ13224 1484 aa24.78■■□□□ 1.56
PEF1-201ENST00000373703 RUSC2Q8N2Y8 1516 aa24.75■■□□□ 1.55
PEF1-201ENST00000373703 PBRM1Q86U86 1689 aa24.73■■□□□ 1.55
PEF1-201ENST00000373703 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
PEF1-201ENST00000373703 ERICH3Q5RHP9 1530 aa24.67■■□□□ 1.54
PEF1-201ENST00000373703 IGF1RP08069 1367 aa24.66■■□□□ 1.54
PEF1-201ENST00000373703 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
PEF1-201ENST00000373703 FAM9AQ8IZU1 332 aaPredicted RBP24.63■■□□□ 1.53
PEF1-201ENST00000373703 FBLN2P98095 1184 aa24.62■■□□□ 1.53
PEF1-201ENST00000373703 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.53
PEF1-201ENST00000373703 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
PEF1-201ENST00000373703 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
PEF1-201ENST00000373703 FHAD1B1AJZ9 1412 aa24.56■■□□□ 1.52
PEF1-201ENST00000373703 EEA1Q15075 1411 aa24.56■■□□□ 1.52
PEF1-201ENST00000373703 CSRNP3Q8WYN3 585 aa24.54■■□□□ 1.52
PEF1-201ENST00000373703 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
PEF1-201ENST00000373703 CUL7Q14999 1698 aa24.51■■□□□ 1.51
PEF1-201ENST00000373703 CHD1O14646 1710 aa24.51■■□□□ 1.51
PEF1-201ENST00000373703 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
PEF1-201ENST00000373703 OSCARQ8IYS5 282 aa24.45■■□□□ 1.5
PEF1-201ENST00000373703 PRXQ9BXM0 1461 aa24.42■■□□□ 1.5
PEF1-201ENST00000373703 RAPGEF2Q9Y4G8 1499 aa24.41■■□□□ 1.5
PEF1-201ENST00000373703 CEP170Q5SW79 1584 aa24.33■■□□□ 1.48
PEF1-201ENST00000373703 NUP160Q12769 1436 aa24.33■■□□□ 1.48
PEF1-201ENST00000373703 EHMT2Q96KQ7 1210 aa24.32■■□□□ 1.48
PEF1-201ENST00000373703 KIF21BO75037 1637 aa24.27■■□□□ 1.48
PEF1-201ENST00000373703 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
PEF1-201ENST00000373703 KIAA0586Q9BVV6 1533 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms