RNA–Protein interactions for RNA: ENST00000373596.5

NEK6-202, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-202ENST00000373596 NISCHQ9Y2I1 1504 aa33.04■■■□□ 2.88
NEK6-202ENST00000373596 ABCC9O60706 1549 aa29.83■■■□□ 2.37
NEK6-202ENST00000373596 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
NEK6-202ENST00000373596 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
NEK6-202ENST00000373596 DNAJC5BQ9UF47 199 aa28.09■■■□□ 2.09
NEK6-202ENST00000373596 NACADO15069 1562 aa28.06■■■□□ 2.08
NEK6-202ENST00000373596 DCAF8L2P0C7V8 631 aa27.96■■■□□ 2.07
NEK6-202ENST00000373596 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
NEK6-202ENST00000373596 UNC13AQ9UPW8 1703 aa27.66■■■□□ 2.02
NEK6-202ENST00000373596 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
NEK6-202ENST00000373596 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
NEK6-202ENST00000373596 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
NEK6-202ENST00000373596 DCAF1Q9Y4B6 1507 aa27.25■■□□□ 1.95
NEK6-202ENST00000373596 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
NEK6-202ENST00000373596 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
NEK6-202ENST00000373596 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
NEK6-202ENST00000373596 CECR2Q9BXF3 1484 aa26.86■■□□□ 1.89
NEK6-202ENST00000373596 EIF4G1Q04637 1599 aaKnown RBP26.83■■□□□ 1.89
NEK6-202ENST00000373596 NCAPD3P42695 1498 aa25.92■■□□□ 1.74
NEK6-202ENST00000373596 ATAD2BQ9ULI0 1458 aa25.86■■□□□ 1.73
NEK6-202ENST00000373596 DNAJC5Q9H3Z4 198 aa25.8■■□□□ 1.72
NEK6-202ENST00000373596 SMARCA4P51532 1647 aa25.8■■□□□ 1.72
NEK6-202ENST00000373596 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
NEK6-202ENST00000373596 ERCC6Q03468 1493 aa25.72■■□□□ 1.71
NEK6-202ENST00000373596 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
NEK6-202ENST00000373596 CUX2O14529 1486 aa25.68■■□□□ 1.7
NEK6-202ENST00000373596 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.69
NEK6-202ENST00000373596 NESP48681 1621 aa25.61■■□□□ 1.69
NEK6-202ENST00000373596 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
NEK6-202ENST00000373596 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
NEK6-202ENST00000373596 MROH2BQ7Z745 1585 aa25.5■■□□□ 1.67
NEK6-202ENST00000373596 THOC2Q8NI27 1593 aaKnown RBP25.34■■□□□ 1.65
NEK6-202ENST00000373596 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
NEK6-202ENST00000373596 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
NEK6-202ENST00000373596 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.62
NEK6-202ENST00000373596 WIZO95785 1651 aa25.17■■□□□ 1.62
NEK6-202ENST00000373596 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
NEK6-202ENST00000373596 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
NEK6-202ENST00000373596 WDR62O43379 1518 aa24.96■■□□□ 1.59
NEK6-202ENST00000373596 RSF1Q96T23 1441 aaPredicted RBP24.93■■□□□ 1.58
NEK6-202ENST00000373596 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.58
NEK6-202ENST00000373596 FANCD2Q9BXW9 1451 aa24.87■■□□□ 1.57
NEK6-202ENST00000373596 CFTRP13569 1480 aa24.84■■□□□ 1.57
NEK6-202ENST00000373596 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
NEK6-202ENST00000373596 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
NEK6-202ENST00000373596 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
NEK6-202ENST00000373596 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
NEK6-202ENST00000373596 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
NEK6-202ENST00000373596 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
NEK6-202ENST00000373596 ZNF608Q9ULD9 1512 aaPredicted RBP24.42■■□□□ 1.5
NEK6-202ENST00000373596 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
NEK6-202ENST00000373596 IFT140Q96RY7 1462 aa24.39■■□□□ 1.5
NEK6-202ENST00000373596 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
NEK6-202ENST00000373596 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
NEK6-202ENST00000373596 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
NEK6-202ENST00000373596 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
NEK6-202ENST00000373596 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
NEK6-202ENST00000373596 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
NEK6-202ENST00000373596 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.462e-7■□□□□ 10.1
NEK6-202ENST00000373596 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
NEK6-202ENST00000373596 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
NEK6-202ENST00000373596 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
NEK6-202ENST00000373596 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.45
NEK6-202ENST00000373596 CHD1O14646 1710 aa24.07■■□□□ 1.44
NEK6-202ENST00000373596 FBLN2P98095 1184 aa24.02■■□□□ 1.44
NEK6-202ENST00000373596 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
NEK6-202ENST00000373596 SOGA1O94964 1423 aa24.01■■□□□ 1.43
NEK6-202ENST00000373596 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
NEK6-202ENST00000373596 CYB5RLQ6IPT4 315 aa23.97■■□□□ 1.43
NEK6-202ENST00000373596 CUX1P39880 1505 aa23.96■■□□□ 1.43
NEK6-202ENST00000373596 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
NEK6-202ENST00000373596 SNAPC4Q5SXM2 1469 aa23.92■■□□□ 1.42
NEK6-202ENST00000373596 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
NEK6-202ENST00000373596 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
NEK6-202ENST00000373596 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
NEK6-202ENST00000373596 CLASP1Q7Z460 1538 aa23.8■■□□□ 1.4
NEK6-202ENST00000373596 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
NEK6-202ENST00000373596 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
NEK6-202ENST00000373596 SYNJ1O43426 1573 aa23.75■■□□□ 1.39
NEK6-202ENST00000373596 SYNJ2O15056 1496 aa23.75■■□□□ 1.39
NEK6-202ENST00000373596 TRHP20396 242 aaPredicted RBP23.72■■□□□ 1.39
NEK6-202ENST00000373596 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
NEK6-202ENST00000373596 PBRM1Q86U86 1689 aa23.7■■□□□ 1.39
NEK6-202ENST00000373596 ABCA10Q8WWZ4 1543 aa23.69■■□□□ 1.38
NEK6-202ENST00000373596 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
NEK6-202ENST00000373596 WRNQ14191 1432 aaPredicted RBP eCLIP23.56■■□□□ 1.36
NEK6-202ENST00000373596 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
NEK6-202ENST00000373596 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
NEK6-202ENST00000373596 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
NEK6-202ENST00000373596 ADAMTS12P58397 1594 aa23.5■■□□□ 1.35
NEK6-202ENST00000373596 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
NEK6-202ENST00000373596 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
NEK6-202ENST00000373596 NUP160Q12769 1436 aa23.44■■□□□ 1.34
NEK6-202ENST00000373596 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
NEK6-202ENST00000373596 ERICH3Q5RHP9 1530 aa23.37■■□□□ 1.33
NEK6-202ENST00000373596 SHROOM2Q13796 1616 aa23.33■■□□□ 1.33
NEK6-202ENST00000373596 PRG4Q92954 1404 aaPredicted RBP23.23■■□□□ 1.31
NEK6-202ENST00000373596 JPH4Q96JJ6 628 aa23.19■■□□□ 1.3
NEK6-202ENST00000373596 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
NEK6-202ENST00000373596 IGF1RP08069 1367 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms