RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 AEBP2Q6ZN18 517 aaPredicted RBP24.76■■□□□ 1.55
RBBP4-201ENST00000373485 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
RBBP4-201ENST00000373485 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
RBBP4-201ENST00000373485 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.98
RBBP4-201ENST00000373485 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
RBBP4-201ENST00000373485 FOXD1Q16676 465 aa19.55■□□□□ 0.72
RBBP4-201ENST00000373485 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
RBBP4-201ENST00000373485 CCDC180Q9P1Z9 1646 aa19.39■□□□□ 0.69
RBBP4-201ENST00000373485 ABCC9O60706 1549 aa18.9■□□□□ 0.62
RBBP4-201ENST00000373485 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
RBBP4-201ENST00000373485 ADRA2BP18089 450 aa18.62■□□□□ 0.57
RBBP4-201ENST00000373485 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
RBBP4-201ENST00000373485 PIAS4Q8N2W9 510 aaPredicted RBP18.37■□□□□ 0.53
RBBP4-201ENST00000373485 ZCCHC6Q5VYS8 1495 aaKnown RBP18.31■□□□□ 0.52
RBBP4-201ENST00000373485 NACADO15069 1562 aa18.2■□□□□ 0.5
RBBP4-201ENST00000373485 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
RBBP4-201ENST00000373485 MSH5O43196 834 aa18.13■□□□□ 0.49
RBBP4-201ENST00000373485 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
RBBP4-201ENST00000373485 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
RBBP4-201ENST00000373485 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
RBBP4-201ENST00000373485 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
RBBP4-201ENST00000373485 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
RBBP4-201ENST00000373485 BICRAQ9NZM4 1560 aa17.64■□□□□ 0.42
RBBP4-201ENST00000373485 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
RBBP4-201ENST00000373485 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
RBBP4-201ENST00000373485 EIF4G1Q04637 1599 aaKnown RBP17.17■□□□□ 0.34
RBBP4-201ENST00000373485 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
RBBP4-201ENST00000373485 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
RBBP4-201ENST00000373485 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
RBBP4-201ENST00000373485 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
RBBP4-201ENST00000373485 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
RBBP4-201ENST00000373485 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
RBBP4-201ENST00000373485 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
RBBP4-201ENST00000373485 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
RBBP4-201ENST00000373485 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
RBBP4-201ENST00000373485 SMARCA2P51531 1590 aa16.83■□□□□ 0.29
RBBP4-201ENST00000373485 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
RBBP4-201ENST00000373485 RSF1Q96T23 1441 aaPredicted RBP16.81■□□□□ 0.28
RBBP4-201ENST00000373485 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
RBBP4-201ENST00000373485 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
RBBP4-201ENST00000373485 WIZO95785 1651 aa16.77■□□□□ 0.28
RBBP4-201ENST00000373485 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
RBBP4-201ENST00000373485 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
RBBP4-201ENST00000373485 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
RBBP4-201ENST00000373485 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
RBBP4-201ENST00000373485 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
RBBP4-201ENST00000373485 SUPT5HO00267 1087 aaKnown RBP16.62■□□□□ 0.25
RBBP4-201ENST00000373485 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
RBBP4-201ENST00000373485 KCNA4P22459 653 aa16.53■□□□□ 0.24
RBBP4-201ENST00000373485 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
RBBP4-201ENST00000373485 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
RBBP4-201ENST00000373485 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
RBBP4-201ENST00000373485 NPM3O75607 178 aaKnown RBP16.4■□□□□ 0.22
RBBP4-201ENST00000373485 NESP48681 1621 aa16.4■□□□□ 0.22
RBBP4-201ENST00000373485 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
RBBP4-201ENST00000373485 LAMC3Q9Y6N6 1575 aa16.33■□□□□ 0.2
RBBP4-201ENST00000373485 CFTRP13569 1480 aa16.27■□□□□ 0.2
RBBP4-201ENST00000373485 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
RBBP4-201ENST00000373485 PDS5BQ9NTI5 1447 aa16.23■□□□□ 0.19
RBBP4-201ENST00000373485 KIF21AQ7Z4S6 1674 aa16.19■□□□□ 0.18
RBBP4-201ENST00000373485 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
RBBP4-201ENST00000373485 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
RBBP4-201ENST00000373485 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
RBBP4-201ENST00000373485 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
RBBP4-201ENST00000373485 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
RBBP4-201ENST00000373485 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
RBBP4-201ENST00000373485 WDR62O43379 1518 aa15.98■□□□□ 0.15
RBBP4-201ENST00000373485 CUX2O14529 1486 aa15.97■□□□□ 0.15
RBBP4-201ENST00000373485 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
RBBP4-201ENST00000373485 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
RBBP4-201ENST00000373485 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
RBBP4-201ENST00000373485 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
RBBP4-201ENST00000373485 CUX1P39880 1505 aa15.87■□□□□ 0.13
RBBP4-201ENST00000373485 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
RBBP4-201ENST00000373485 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
RBBP4-201ENST00000373485 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
RBBP4-201ENST00000373485 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
RBBP4-201ENST00000373485 IFT140Q96RY7 1462 aa15.77■□□□□ 0.12
RBBP4-201ENST00000373485 TOP2BQ02880 1626 aa15.77■□□□□ 0.11
RBBP4-201ENST00000373485 SOGA1O94964 1423 aa15.76■□□□□ 0.11
RBBP4-201ENST00000373485 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
RBBP4-201ENST00000373485 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
RBBP4-201ENST00000373485 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
RBBP4-201ENST00000373485 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
RBBP4-201ENST00000373485 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.11
RBBP4-201ENST00000373485 TDRD9Q8NDG6 1382 aaKnown RBP15.67■□□□□ 0.1
RBBP4-201ENST00000373485 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.13e-7■■■■■ 37.5
RBBP4-201ENST00000373485 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
RBBP4-201ENST00000373485 EIF4G3O43432 1585 aaKnown RBP15.64■□□□□ 0.09
RBBP4-201ENST00000373485 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
RBBP4-201ENST00000373485 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
RBBP4-201ENST00000373485 GAPVD1Q14C86 1478 aa15.56■□□□□ 0.08
RBBP4-201ENST00000373485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.55■□□□□ 0.084e-8■■■□□ 17.9
RBBP4-201ENST00000373485 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
RBBP4-201ENST00000373485 GRIN2BQ13224 1484 aa15.53■□□□□ 0.08
RBBP4-201ENST00000373485 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
RBBP4-201ENST00000373485 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
RBBP4-201ENST00000373485 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
RBBP4-201ENST00000373485 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
RBBP4-201ENST00000373485 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms