RNA–Protein interactions for RNA: ENST00000372987.8

CCND3-201, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 2,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-201ENST00000372987 NISCHQ9Y2I1 1504 aa34.23■■■■□ 3.07
CCND3-201ENST00000372987 CCDC180Q9P1Z9 1646 aa30.06■■■□□ 2.4
CCND3-201ENST00000372987 ABCC9O60706 1549 aa29.24■■■□□ 2.27
CCND3-201ENST00000372987 ZCCHC6Q5VYS8 1495 aaKnown RBP28.64■■■□□ 2.17
CCND3-201ENST00000372987 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
CCND3-201ENST00000372987 DCAF1Q9Y4B6 1507 aa28.16■■■□□ 2.1
CCND3-201ENST00000372987 NACADO15069 1562 aa28.14■■■□□ 2.1
CCND3-201ENST00000372987 RB1CC1Q8TDY2 1594 aa28.08■■■□□ 2.09
CCND3-201ENST00000372987 MYO15BQ96JP2 1530 aa28.04■■■□□ 2.08
CCND3-201ENST00000372987 SCRIBQ14160 1630 aa27.76■■■□□ 2.03
CCND3-201ENST00000372987 UNC13AQ9UPW8 1703 aa27.69■■■□□ 2.02
CCND3-201ENST00000372987 SHROOM4Q9ULL8 1493 aa27.68■■■□□ 2.02
CCND3-201ENST00000372987 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
CCND3-201ENST00000372987 BICRAQ9NZM4 1560 aa27.42■■□□□ 1.98
CCND3-201ENST00000372987 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
CCND3-201ENST00000372987 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
CCND3-201ENST00000372987 MROH2BQ7Z745 1585 aa26.52■■□□□ 1.84
CCND3-201ENST00000372987 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
CCND3-201ENST00000372987 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
CCND3-201ENST00000372987 BAZ1AQ9NRL2 1556 aaPredicted RBP26.42■■□□□ 1.82
CCND3-201ENST00000372987 CC2D2AQ9P2K1 1620 aa26.4■■□□□ 1.82
CCND3-201ENST00000372987 RSF1Q96T23 1441 aaPredicted RBP26.34■■□□□ 1.81
CCND3-201ENST00000372987 WIZO95785 1651 aa26.28■■□□□ 1.8
CCND3-201ENST00000372987 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.79
CCND3-201ENST00000372987 ATAD2BQ9ULI0 1458 aa26.2■■□□□ 1.79
CCND3-201ENST00000372987 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
CCND3-201ENST00000372987 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
CCND3-201ENST00000372987 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
CCND3-201ENST00000372987 BAZ1BQ9UIG0 1483 aaKnown RBP25.99■■□□□ 1.75
CCND3-201ENST00000372987 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
CCND3-201ENST00000372987 TOP2AP11388 1531 aaKnown RBP25.86■■□□□ 1.73
CCND3-201ENST00000372987 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
CCND3-201ENST00000372987 NESP48681 1621 aa25.52■■□□□ 1.68
CCND3-201ENST00000372987 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
CCND3-201ENST00000372987 CFTRP13569 1480 aa25.29■■□□□ 1.64
CCND3-201ENST00000372987 LAMC3Q9Y6N6 1575 aa25.23■■□□□ 1.63
CCND3-201ENST00000372987 KIF21AQ7Z4S6 1674 aa25.14■■□□□ 1.62
CCND3-201ENST00000372987 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
CCND3-201ENST00000372987 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
CCND3-201ENST00000372987 ERCC6Q03468 1493 aa25.03■■□□□ 1.6
CCND3-201ENST00000372987 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
CCND3-201ENST00000372987 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
CCND3-201ENST00000372987 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
CCND3-201ENST00000372987 URB2Q14146 1524 aaKnown RBP24.88■■□□□ 1.57
CCND3-201ENST00000372987 THOC2Q8NI27 1593 aaKnown RBP24.87■■□□□ 1.57
CCND3-201ENST00000372987 CUX1P39880 1505 aa24.82■■□□□ 1.56
CCND3-201ENST00000372987 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
CCND3-201ENST00000372987 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
CCND3-201ENST00000372987 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.569e-6■■■■■ 50.1
CCND3-201ENST00000372987 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
CCND3-201ENST00000372987 WDR62O43379 1518 aa24.73■■□□□ 1.55
CCND3-201ENST00000372987 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
CCND3-201ENST00000372987 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
CCND3-201ENST00000372987 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
CCND3-201ENST00000372987 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
CCND3-201ENST00000372987 BIVM-ERCC5R4GMW8 1640 aa24.62■■□□□ 1.53
CCND3-201ENST00000372987 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
CCND3-201ENST00000372987 CUX2O14529 1486 aa24.59■■□□□ 1.53
CCND3-201ENST00000372987 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
CCND3-201ENST00000372987 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
CCND3-201ENST00000372987 ZNF608Q9ULD9 1512 aaPredicted RBP24.46■■□□□ 1.51
CCND3-201ENST00000372987 SOGA1O94964 1423 aa24.46■■□□□ 1.51
CCND3-201ENST00000372987 TARBP1Q13395 1621 aaKnown RBP24.45■■□□□ 1.51
CCND3-201ENST00000372987 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
CCND3-201ENST00000372987 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
CCND3-201ENST00000372987 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
CCND3-201ENST00000372987 IFT140Q96RY7 1462 aa24.36■■□□□ 1.49
CCND3-201ENST00000372987 AQRO60306 1485 aaKnown RBP eCLIP24.36■■□□□ 1.494e-7■■■■■ 38.3
CCND3-201ENST00000372987 ABCA10Q8WWZ4 1543 aa24.32■■□□□ 1.48
CCND3-201ENST00000372987 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
CCND3-201ENST00000372987 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
CCND3-201ENST00000372987 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
CCND3-201ENST00000372987 GAPVD1Q14C86 1478 aa24.18■■□□□ 1.46
CCND3-201ENST00000372987 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
CCND3-201ENST00000372987 PBRM1Q86U86 1689 aa24.13■■□□□ 1.45
CCND3-201ENST00000372987 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.45
CCND3-201ENST00000372987 SNAPC4Q5SXM2 1469 aa24.08■■□□□ 1.45
CCND3-201ENST00000372987 IGF1RP08069 1367 aa24.08■■□□□ 1.44
CCND3-201ENST00000372987 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
CCND3-201ENST00000372987 ERICH3Q5RHP9 1530 aa23.99■■□□□ 1.43
CCND3-201ENST00000372987 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
CCND3-201ENST00000372987 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
CCND3-201ENST00000372987 FBLN2P98095 1184 aa23.95■■□□□ 1.42
CCND3-201ENST00000372987 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
CCND3-201ENST00000372987 HRCP23327 699 aa23.91■■□□□ 1.42
CCND3-201ENST00000372987 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
CCND3-201ENST00000372987 CHD1O14646 1710 aa23.91■■□□□ 1.42
CCND3-201ENST00000372987 RAPGEF2Q9Y4G8 1499 aa23.88■■□□□ 1.41
CCND3-201ENST00000372987 EEA1Q15075 1411 aa23.88■■□□□ 1.41
CCND3-201ENST00000372987 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
CCND3-201ENST00000372987 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
CCND3-201ENST00000372987 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
CCND3-201ENST00000372987 CUL7Q14999 1698 aa23.86■■□□□ 1.41
CCND3-201ENST00000372987 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
CCND3-201ENST00000372987 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.4
CCND3-201ENST00000372987 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
CCND3-201ENST00000372987 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
CCND3-201ENST00000372987 KIF21BO75037 1637 aa23.74■■□□□ 1.39
CCND3-201ENST00000372987 NUP160Q12769 1436 aa23.66■■□□□ 1.38
CCND3-201ENST00000372987 GOLGA3Q08378 1498 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms