RNA–Protein interactions for RNA: ENST00000372898.6

SWI5-202, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS ALT2 TSL 5

Gene SWI5, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-202ENST00000372898 NISCHQ9Y2I1 1504 aa34.59■■■■□ 3.13
SWI5-202ENST00000372898 CCDC180Q9P1Z9 1646 aa30.63■■■□□ 2.49
SWI5-202ENST00000372898 ABCC9O60706 1549 aa29.47■■■□□ 2.31
SWI5-202ENST00000372898 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
SWI5-202ENST00000372898 DCAF8L2P0C7V8 631 aa28.72■■■□□ 2.19
SWI5-202ENST00000372898 NACADO15069 1562 aa28.64■■■□□ 2.18
SWI5-202ENST00000372898 DCAF1Q9Y4B6 1507 aa28.64■■■□□ 2.17
SWI5-202ENST00000372898 RB1CC1Q8TDY2 1594 aa28.58■■■□□ 2.17
SWI5-202ENST00000372898 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.17
SWI5-202ENST00000372898 UNC13AQ9UPW8 1703 aa28.04■■■□□ 2.08
SWI5-202ENST00000372898 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
SWI5-202ENST00000372898 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
SWI5-202ENST00000372898 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
SWI5-202ENST00000372898 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
SWI5-202ENST00000372898 EIF4G1Q04637 1599 aaKnown RBP26.91■■□□□ 1.9
SWI5-202ENST00000372898 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
SWI5-202ENST00000372898 BAZ1AQ9NRL2 1556 aaPredicted RBP26.8■■□□□ 1.88
SWI5-202ENST00000372898 SMARCA4P51532 1647 aa26.79■■□□□ 1.88
SWI5-202ENST00000372898 CC2D2AQ9P2K1 1620 aa26.71■■□□□ 1.87
SWI5-202ENST00000372898 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
SWI5-202ENST00000372898 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
SWI5-202ENST00000372898 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
SWI5-202ENST00000372898 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
SWI5-202ENST00000372898 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
SWI5-202ENST00000372898 ATAD2BQ9ULI0 1458 aa26.47■■□□□ 1.83
SWI5-202ENST00000372898 WIZO95785 1651 aa26.46■■□□□ 1.83
SWI5-202ENST00000372898 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
SWI5-202ENST00000372898 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
SWI5-202ENST00000372898 BAZ1BQ9UIG0 1483 aaKnown RBP26.31■■□□□ 1.8
SWI5-202ENST00000372898 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
SWI5-202ENST00000372898 TOP2AP11388 1531 aaKnown RBP26.18■■□□□ 1.78
SWI5-202ENST00000372898 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
SWI5-202ENST00000372898 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
SWI5-202ENST00000372898 CADPSQ9ULU8 1353 aa25.63■■□□□ 1.69
SWI5-202ENST00000372898 NESP48681 1621 aa25.63■■□□□ 1.69
SWI5-202ENST00000372898 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
SWI5-202ENST00000372898 CFTRP13569 1480 aa25.58■■□□□ 1.69
SWI5-202ENST00000372898 PDS5BQ9NTI5 1447 aa25.44■■□□□ 1.66
SWI5-202ENST00000372898 KIF21AQ7Z4S6 1674 aa25.43■■□□□ 1.66
SWI5-202ENST00000372898 ERCC6Q03468 1493 aa25.39■■□□□ 1.65
SWI5-202ENST00000372898 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
SWI5-202ENST00000372898 CEP164Q9UPV0 1460 aa25.31■■□□□ 1.64
SWI5-202ENST00000372898 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
SWI5-202ENST00000372898 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
SWI5-202ENST00000372898 URB2Q14146 1524 aaKnown RBP25.08■■□□□ 1.61
SWI5-202ENST00000372898 WDR62O43379 1518 aa25.07■■□□□ 1.6
SWI5-202ENST00000372898 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
SWI5-202ENST00000372898 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
SWI5-202ENST00000372898 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
SWI5-202ENST00000372898 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.595e-6■■■■■ 29.2
SWI5-202ENST00000372898 CUX1P39880 1505 aa25■■□□□ 1.59
SWI5-202ENST00000372898 BIVM-ERCC5R4GMW8 1640 aa24.95■■□□□ 1.58
SWI5-202ENST00000372898 SYNJ1O43426 1573 aa24.94■■□□□ 1.58
SWI5-202ENST00000372898 CUX2O14529 1486 aa24.93■■□□□ 1.58
SWI5-202ENST00000372898 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
SWI5-202ENST00000372898 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
SWI5-202ENST00000372898 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.56
SWI5-202ENST00000372898 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
SWI5-202ENST00000372898 TARBP1Q13395 1621 aaKnown RBP24.73■■□□□ 1.55
SWI5-202ENST00000372898 SOGA1O94964 1423 aa24.73■■□□□ 1.55
SWI5-202ENST00000372898 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
SWI5-202ENST00000372898 RAD54L2Q9Y4B4 1467 aa24.71■■□□□ 1.55
SWI5-202ENST00000372898 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
SWI5-202ENST00000372898 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
SWI5-202ENST00000372898 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
SWI5-202ENST00000372898 ZNF608Q9ULD9 1512 aaPredicted RBP24.57■■□□□ 1.52
SWI5-202ENST00000372898 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
SWI5-202ENST00000372898 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
SWI5-202ENST00000372898 ABCA5Q8WWZ7 1642 aa24.51■■□□□ 1.51
SWI5-202ENST00000372898 AQRO60306 1485 aaKnown RBP eCLIP24.5■■□□□ 1.513e-7■■■□□ 17
SWI5-202ENST00000372898 PBRM1Q86U86 1689 aa24.49■■□□□ 1.51
SWI5-202ENST00000372898 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
SWI5-202ENST00000372898 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
SWI5-202ENST00000372898 GRIN2BQ13224 1484 aa24.39■■□□□ 1.5
SWI5-202ENST00000372898 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
SWI5-202ENST00000372898 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
SWI5-202ENST00000372898 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
SWI5-202ENST00000372898 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
SWI5-202ENST00000372898 EEA1Q15075 1411 aa24.28■■□□□ 1.48
SWI5-202ENST00000372898 CUL7Q14999 1698 aa24.27■■□□□ 1.48
SWI5-202ENST00000372898 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
SWI5-202ENST00000372898 IGF1RP08069 1367 aa24.24■■□□□ 1.47
SWI5-202ENST00000372898 CHD1O14646 1710 aa24.23■■□□□ 1.47
SWI5-202ENST00000372898 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
SWI5-202ENST00000372898 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
SWI5-202ENST00000372898 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
SWI5-202ENST00000372898 CSRNP3Q8WYN3 585 aa24.16■■□□□ 1.46
SWI5-202ENST00000372898 FBLN2P98095 1184 aa24.14■■□□□ 1.45
SWI5-202ENST00000372898 CARMIL1Q5VZK9 1371 aa24.14■■□□□ 1.45
SWI5-202ENST00000372898 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
SWI5-202ENST00000372898 GRIN2AQ12879 1464 aa24.09■■□□□ 1.45
SWI5-202ENST00000372898 PRXQ9BXM0 1461 aa24.07■■□□□ 1.44
SWI5-202ENST00000372898 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
SWI5-202ENST00000372898 KIF21BO75037 1637 aa24.04■■□□□ 1.44
SWI5-202ENST00000372898 CEP170Q5SW79 1584 aa23.96■■□□□ 1.43
SWI5-202ENST00000372898 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
SWI5-202ENST00000372898 NUP160Q12769 1436 aa23.93■■□□□ 1.42
SWI5-202ENST00000372898 CTTNBP2Q8WZ74 1663 aa23.93■■□□□ 1.42
SWI5-202ENST00000372898 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
SWI5-202ENST00000372898 CLASP1Q7Z460 1538 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms