RNA–Protein interactions for RNA: ENST00000372382.8

TSC22D3-202, Transcript of TSC22 domain family member 3, humanhuman

TSL 3 BASIC

Gene TSC22D3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-202ENST00000372382 NISCHQ9Y2I1 1504 aa32.7■■■□□ 2.83
TSC22D3-202ENST00000372382 CCDC180Q9P1Z9 1646 aa29.14■■■□□ 2.26
TSC22D3-202ENST00000372382 ABCC9O60706 1549 aa28.64■■■□□ 2.18
TSC22D3-202ENST00000372382 RB1CC1Q8TDY2 1594 aa27.49■■□□□ 1.99
TSC22D3-202ENST00000372382 DCAF8L2P0C7V8 631 aa27.49■■□□□ 1.99
TSC22D3-202ENST00000372382 NACADO15069 1562 aa27.4■■□□□ 1.98
TSC22D3-202ENST00000372382 ZCCHC6Q5VYS8 1495 aaKnown RBP27.21■■□□□ 1.95
TSC22D3-202ENST00000372382 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
TSC22D3-202ENST00000372382 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
TSC22D3-202ENST00000372382 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
TSC22D3-202ENST00000372382 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.87
TSC22D3-202ENST00000372382 SCRIBQ14160 1630 aa26.64■■□□□ 1.85
TSC22D3-202ENST00000372382 BICRAQ9NZM4 1560 aa26.62■■□□□ 1.85
TSC22D3-202ENST00000372382 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
TSC22D3-202ENST00000372382 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
TSC22D3-202ENST00000372382 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
TSC22D3-202ENST00000372382 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.74
TSC22D3-202ENST00000372382 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
TSC22D3-202ENST00000372382 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
TSC22D3-202ENST00000372382 BAZ1AQ9NRL2 1556 aaPredicted RBP25.37■■□□□ 1.65
TSC22D3-202ENST00000372382 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
TSC22D3-202ENST00000372382 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
TSC22D3-202ENST00000372382 NCAPD3P42695 1498 aa25.25■■□□□ 1.63
TSC22D3-202ENST00000372382 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
TSC22D3-202ENST00000372382 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
TSC22D3-202ENST00000372382 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
TSC22D3-202ENST00000372382 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
TSC22D3-202ENST00000372382 WIZO95785 1651 aa24.98■■□□□ 1.59
TSC22D3-202ENST00000372382 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
TSC22D3-202ENST00000372382 NESP48681 1621 aa24.75■■□□□ 1.55
TSC22D3-202ENST00000372382 ERCC6Q03468 1493 aa24.72■■□□□ 1.55
TSC22D3-202ENST00000372382 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
TSC22D3-202ENST00000372382 LAMC3Q9Y6N6 1575 aa24.65■■□□□ 1.54
TSC22D3-202ENST00000372382 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
TSC22D3-202ENST00000372382 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
TSC22D3-202ENST00000372382 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
TSC22D3-202ENST00000372382 CUX2O14529 1486 aa24.43■■□□□ 1.5
TSC22D3-202ENST00000372382 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
TSC22D3-202ENST00000372382 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
TSC22D3-202ENST00000372382 CFTRP13569 1480 aa24.36■■□□□ 1.49
TSC22D3-202ENST00000372382 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
TSC22D3-202ENST00000372382 CEP164Q9UPV0 1460 aa24.28■■□□□ 1.48
TSC22D3-202ENST00000372382 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
TSC22D3-202ENST00000372382 PRDM2Q13029 1718 aa24.26■■□□□ 1.47
TSC22D3-202ENST00000372382 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
TSC22D3-202ENST00000372382 WDR62O43379 1518 aa24.15■■□□□ 1.46
TSC22D3-202ENST00000372382 URB2Q14146 1524 aaKnown RBP24.04■■□□□ 1.44
TSC22D3-202ENST00000372382 TOPBP1Q92547 1522 aa23.89■■□□□ 1.41
TSC22D3-202ENST00000372382 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
TSC22D3-202ENST00000372382 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
TSC22D3-202ENST00000372382 DNAJC5Q9H3Z4 198 aa23.78■■□□□ 1.4
TSC22D3-202ENST00000372382 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
TSC22D3-202ENST00000372382 CUX1P39880 1505 aa23.67■■□□□ 1.38
TSC22D3-202ENST00000372382 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
TSC22D3-202ENST00000372382 ZNF608Q9ULD9 1512 aaPredicted RBP23.66■■□□□ 1.38
TSC22D3-202ENST00000372382 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
TSC22D3-202ENST00000372382 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
TSC22D3-202ENST00000372382 RAD54L2Q9Y4B4 1467 aa23.59■■□□□ 1.37
TSC22D3-202ENST00000372382 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
TSC22D3-202ENST00000372382 SOGA1O94964 1423 aa23.59■■□□□ 1.37
TSC22D3-202ENST00000372382 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.36
TSC22D3-202ENST00000372382 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
TSC22D3-202ENST00000372382 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
TSC22D3-202ENST00000372382 BIVM-ERCC5R4GMW8 1640 aa23.44■■□□□ 1.34
TSC22D3-202ENST00000372382 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
TSC22D3-202ENST00000372382 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
TSC22D3-202ENST00000372382 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
TSC22D3-202ENST00000372382 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
TSC22D3-202ENST00000372382 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
TSC22D3-202ENST00000372382 CHD1O14646 1710 aa23.35■■□□□ 1.33
TSC22D3-202ENST00000372382 FBLN2P98095 1184 aa23.34■■□□□ 1.33
TSC22D3-202ENST00000372382 SNAPC4Q5SXM2 1469 aa23.32■■□□□ 1.32
TSC22D3-202ENST00000372382 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
TSC22D3-202ENST00000372382 GRIN2BQ13224 1484 aa23.31■■□□□ 1.32
TSC22D3-202ENST00000372382 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
TSC22D3-202ENST00000372382 ABCA5Q8WWZ7 1642 aa23.28■■□□□ 1.32
TSC22D3-202ENST00000372382 MAGI1Q96QZ7 1491 aaPredicted RBP23.25■■□□□ 1.31
TSC22D3-202ENST00000372382 CHMP7Q8WUX9 453 aaPredicted RBP23.22■■□□□ 1.31
TSC22D3-202ENST00000372382 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
TSC22D3-202ENST00000372382 ADAMTS12P58397 1594 aa23.09■■□□□ 1.29
TSC22D3-202ENST00000372382 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
TSC22D3-202ENST00000372382 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.28
TSC22D3-202ENST00000372382 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.28
TSC22D3-202ENST00000372382 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.28
TSC22D3-202ENST00000372382 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.28
TSC22D3-202ENST00000372382 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
TSC22D3-202ENST00000372382 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
TSC22D3-202ENST00000372382 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
TSC22D3-202ENST00000372382 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
TSC22D3-202ENST00000372382 KIF27Q86VH2 1401 aa23■■□□□ 1.27
TSC22D3-202ENST00000372382 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
TSC22D3-202ENST00000372382 CUL7Q14999 1698 aa22.89■■□□□ 1.25
TSC22D3-202ENST00000372382 IGF1RP08069 1367 aa22.89■■□□□ 1.25
TSC22D3-202ENST00000372382 NUP160Q12769 1436 aa22.88■■□□□ 1.25
TSC22D3-202ENST00000372382 CYB5RLQ6IPT4 315 aa22.87■■□□□ 1.25
TSC22D3-202ENST00000372382 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
TSC22D3-202ENST00000372382 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
TSC22D3-202ENST00000372382 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
TSC22D3-202ENST00000372382 SHROOM2Q13796 1616 aa22.74■■□□□ 1.23
TSC22D3-202ENST00000372382 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms