RNA–Protein interactions for RNA: ENST00000372123.4

GFI1B-203, Transcript of growth factor independent 1B transcriptional repressor, humanhuman

TSL 5 BASIC

Gene GFI1B, Length 1,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1B-203ENST00000372123 NISCHQ9Y2I1 1504 aa32.56■■■□□ 2.8
GFI1B-203ENST00000372123 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
GFI1B-203ENST00000372123 ABCC9O60706 1549 aa28.39■■■□□ 2.14
GFI1B-203ENST00000372123 RB1CC1Q8TDY2 1594 aa27.33■■□□□ 1.97
GFI1B-203ENST00000372123 NACADO15069 1562 aa27.3■■□□□ 1.96
GFI1B-203ENST00000372123 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
GFI1B-203ENST00000372123 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
GFI1B-203ENST00000372123 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
GFI1B-203ENST00000372123 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
GFI1B-203ENST00000372123 UNC13AQ9UPW8 1703 aa26.75■■□□□ 1.87
GFI1B-203ENST00000372123 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
GFI1B-203ENST00000372123 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
GFI1B-203ENST00000372123 SCRIBQ14160 1630 aa26.42■■□□□ 1.82
GFI1B-203ENST00000372123 SHROOM4Q9ULL8 1493 aa26.31■■□□□ 1.8
GFI1B-203ENST00000372123 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
GFI1B-203ENST00000372123 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
GFI1B-203ENST00000372123 CC2D2AQ9P2K1 1620 aa25.73■■□□□ 1.71
GFI1B-203ENST00000372123 CECR2Q9BXF3 1484 aa25.55■■□□□ 1.68
GFI1B-203ENST00000372123 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
GFI1B-203ENST00000372123 BAZ1AQ9NRL2 1556 aaPredicted RBP25.25■■□□□ 1.63
GFI1B-203ENST00000372123 NCAPD3P42695 1498 aa25.17■■□□□ 1.62
GFI1B-203ENST00000372123 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
GFI1B-203ENST00000372123 SMARCA2P51531 1590 aa25.14■■□□□ 1.61
GFI1B-203ENST00000372123 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
GFI1B-203ENST00000372123 HMGXB3Q12766 1538 aa25.09■■□□□ 1.61
GFI1B-203ENST00000372123 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.6
GFI1B-203ENST00000372123 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
GFI1B-203ENST00000372123 WIZO95785 1651 aa24.79■■□□□ 1.56
GFI1B-203ENST00000372123 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
GFI1B-203ENST00000372123 NESP48681 1621 aa24.57■■□□□ 1.52
GFI1B-203ENST00000372123 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
GFI1B-203ENST00000372123 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
GFI1B-203ENST00000372123 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
GFI1B-203ENST00000372123 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
GFI1B-203ENST00000372123 CUX2O14529 1486 aa24.33■■□□□ 1.48
GFI1B-203ENST00000372123 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
GFI1B-203ENST00000372123 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
GFI1B-203ENST00000372123 THOC2Q8NI27 1593 aaKnown RBP24.3■■□□□ 1.48
GFI1B-203ENST00000372123 CFTRP13569 1480 aa24.28■■□□□ 1.48
GFI1B-203ENST00000372123 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
GFI1B-203ENST00000372123 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
GFI1B-203ENST00000372123 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
GFI1B-203ENST00000372123 CEP164Q9UPV0 1460 aa24.12■■□□□ 1.45
GFI1B-203ENST00000372123 MRC2Q9UBG0 1479 aa24.11■■□□□ 1.45
GFI1B-203ENST00000372123 WDR62O43379 1518 aa24.08■■□□□ 1.45
GFI1B-203ENST00000372123 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
GFI1B-203ENST00000372123 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
GFI1B-203ENST00000372123 TOPBP1Q92547 1522 aa23.75■■□□□ 1.39
GFI1B-203ENST00000372123 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
GFI1B-203ENST00000372123 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
GFI1B-203ENST00000372123 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
GFI1B-203ENST00000372123 DNAJC5Q9H3Z4 198 aa23.59■■□□□ 1.37
GFI1B-203ENST00000372123 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
GFI1B-203ENST00000372123 CUX1P39880 1505 aa23.54■■□□□ 1.36
GFI1B-203ENST00000372123 TARBP1Q13395 1621 aaKnown RBP23.53■■□□□ 1.36
GFI1B-203ENST00000372123 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
GFI1B-203ENST00000372123 EIF4G3O43432 1585 aaKnown RBP23.47■■□□□ 1.35
GFI1B-203ENST00000372123 FGD5Q6ZNL6 1462 aa23.46■■□□□ 1.35
GFI1B-203ENST00000372123 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
GFI1B-203ENST00000372123 WDR97A6NE52 1622 aa23.38■■□□□ 1.33
GFI1B-203ENST00000372123 SOGA1O94964 1423 aa23.38■■□□□ 1.33
GFI1B-203ENST00000372123 BIVM-ERCC5R4GMW8 1640 aa23.34■■□□□ 1.33
GFI1B-203ENST00000372123 TOP2BQ02880 1626 aa23.33■■□□□ 1.32
GFI1B-203ENST00000372123 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.323e-7■■■■■ 29.2
GFI1B-203ENST00000372123 WRNQ14191 1432 aaPredicted RBP eCLIP23.32■■□□□ 1.32
GFI1B-203ENST00000372123 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
GFI1B-203ENST00000372123 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
GFI1B-203ENST00000372123 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
GFI1B-203ENST00000372123 ABCA5Q8WWZ7 1642 aa23.21■■□□□ 1.31
GFI1B-203ENST00000372123 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
GFI1B-203ENST00000372123 CHD1O14646 1710 aa23.16■■□□□ 1.3
GFI1B-203ENST00000372123 OSCARQ8IYS5 282 aa23.16■■□□□ 1.3
GFI1B-203ENST00000372123 SNAPC4Q5SXM2 1469 aa23.16■■□□□ 1.3
GFI1B-203ENST00000372123 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
GFI1B-203ENST00000372123 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.3
GFI1B-203ENST00000372123 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
GFI1B-203ENST00000372123 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
GFI1B-203ENST00000372123 ADAMTS12P58397 1594 aa22.98■■□□□ 1.27
GFI1B-203ENST00000372123 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
GFI1B-203ENST00000372123 CLASP1Q7Z460 1538 aa22.96■■□□□ 1.27
GFI1B-203ENST00000372123 FBLN2P98095 1184 aa22.94■■□□□ 1.26
GFI1B-203ENST00000372123 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
GFI1B-203ENST00000372123 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
GFI1B-203ENST00000372123 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
GFI1B-203ENST00000372123 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
GFI1B-203ENST00000372123 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
GFI1B-203ENST00000372123 GRIN2AQ12879 1464 aa22.89■■□□□ 1.25
GFI1B-203ENST00000372123 FHAD1B1AJZ9 1412 aa22.88■■□□□ 1.25
GFI1B-203ENST00000372123 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
GFI1B-203ENST00000372123 NUP160Q12769 1436 aa22.82■■□□□ 1.24
GFI1B-203ENST00000372123 CEP170Q5SW79 1584 aa22.8■■□□□ 1.24
GFI1B-203ENST00000372123 CUL7Q14999 1698 aa22.76■■□□□ 1.23
GFI1B-203ENST00000372123 IGF1RP08069 1367 aa22.74■■□□□ 1.23
GFI1B-203ENST00000372123 ARAP1Q96P48 1450 aa22.74■■□□□ 1.23
GFI1B-203ENST00000372123 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
GFI1B-203ENST00000372123 SHROOM2Q13796 1616 aa22.68■■□□□ 1.22
GFI1B-203ENST00000372123 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
GFI1B-203ENST00000372123 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
GFI1B-203ENST00000372123 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.2
GFI1B-203ENST00000372123 CARMIL1Q5VZK9 1371 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms