RNA–Protein interactions for RNA: ENST00000371991.3

SURF4-203, Transcript of surfeit 4, humanhuman

TSL 3 BASIC

Gene SURF4, Length 715 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-203ENST00000371991 NISCHQ9Y2I1 1504 aa33.54■■■□□ 2.96
SURF4-203ENST00000371991 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
SURF4-203ENST00000371991 ABCC9O60706 1549 aa29.99■■■□□ 2.39
SURF4-203ENST00000371991 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
SURF4-203ENST00000371991 NACADO15069 1562 aa28.44■■■□□ 2.14
SURF4-203ENST00000371991 DCAF8L2P0C7V8 631 aa28.23■■■□□ 2.11
SURF4-203ENST00000371991 DNAJC5BQ9UF47 199 aa28.09■■■□□ 2.09
SURF4-203ENST00000371991 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.09
SURF4-203ENST00000371991 UNC13AQ9UPW8 1703 aa28.03■■■□□ 2.08
SURF4-203ENST00000371991 PABPN1Q86U42 306 aaKnown RBP eCLIP27.92■■■□□ 2.06
SURF4-203ENST00000371991 ZCCHC6Q5VYS8 1495 aaKnown RBP27.81■■■□□ 2.04
SURF4-203ENST00000371991 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
SURF4-203ENST00000371991 DCAF1Q9Y4B6 1507 aa27.73■■■□□ 2.03
SURF4-203ENST00000371991 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
SURF4-203ENST00000371991 SCRIBQ14160 1630 aa27.39■■□□□ 1.98
SURF4-203ENST00000371991 CC2D2AQ9P2K1 1620 aa27.13■■□□□ 1.93
SURF4-203ENST00000371991 EIF4G1Q04637 1599 aaKnown RBP27.09■■□□□ 1.93
SURF4-203ENST00000371991 CECR2Q9BXF3 1484 aa27.02■■□□□ 1.92
SURF4-203ENST00000371991 NCAPD3P42695 1498 aa26.24■■□□□ 1.79
SURF4-203ENST00000371991 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
SURF4-203ENST00000371991 ATAD2BQ9ULI0 1458 aa26.16■■□□□ 1.78
SURF4-203ENST00000371991 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
SURF4-203ENST00000371991 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
SURF4-203ENST00000371991 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
SURF4-203ENST00000371991 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
SURF4-203ENST00000371991 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
SURF4-203ENST00000371991 ERCC6Q03468 1493 aa25.89■■□□□ 1.73
SURF4-203ENST00000371991 CUX2O14529 1486 aa25.86■■□□□ 1.73
SURF4-203ENST00000371991 MROH2BQ7Z745 1585 aa25.83■■□□□ 1.73
SURF4-203ENST00000371991 NESP48681 1621 aa25.79■■□□□ 1.72
SURF4-203ENST00000371991 DNAJC5Q9H3Z4 198 aa25.77■■□□□ 1.72
SURF4-203ENST00000371991 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
SURF4-203ENST00000371991 WIZO95785 1651 aa25.55■■□□□ 1.68
SURF4-203ENST00000371991 THOC2Q8NI27 1593 aaKnown RBP25.55■■□□□ 1.68
SURF4-203ENST00000371991 KIF21AQ7Z4S6 1674 aa25.5■■□□□ 1.67
SURF4-203ENST00000371991 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
SURF4-203ENST00000371991 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
SURF4-203ENST00000371991 RSF1Q96T23 1441 aaPredicted RBP25.31■■□□□ 1.64
SURF4-203ENST00000371991 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
SURF4-203ENST00000371991 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
SURF4-203ENST00000371991 WDR62O43379 1518 aa25.21■■□□□ 1.63
SURF4-203ENST00000371991 CFTRP13569 1480 aa25.16■■□□□ 1.62
SURF4-203ENST00000371991 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
SURF4-203ENST00000371991 FANCD2Q9BXW9 1451 aa25.14■■□□□ 1.61
SURF4-203ENST00000371991 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
SURF4-203ENST00000371991 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
SURF4-203ENST00000371991 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
SURF4-203ENST00000371991 TOPBP1Q92547 1522 aa24.68■■□□□ 1.54
SURF4-203ENST00000371991 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
SURF4-203ENST00000371991 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
SURF4-203ENST00000371991 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
SURF4-203ENST00000371991 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
SURF4-203ENST00000371991 ZNF608Q9ULD9 1512 aaPredicted RBP24.61■■□□□ 1.53
SURF4-203ENST00000371991 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
SURF4-203ENST00000371991 EIF4G3O43432 1585 aaKnown RBP24.49■■□□□ 1.51
SURF4-203ENST00000371991 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
SURF4-203ENST00000371991 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
SURF4-203ENST00000371991 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.55e-7■■■■■ 27.3
SURF4-203ENST00000371991 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
SURF4-203ENST00000371991 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
SURF4-203ENST00000371991 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
SURF4-203ENST00000371991 CHD1O14646 1710 aa24.33■■□□□ 1.49
SURF4-203ENST00000371991 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
SURF4-203ENST00000371991 SOGA1O94964 1423 aa24.31■■□□□ 1.48
SURF4-203ENST00000371991 ARHGEF11O15085 1522 aa24.28■■□□□ 1.48
SURF4-203ENST00000371991 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
SURF4-203ENST00000371991 CUX1P39880 1505 aa24.27■■□□□ 1.48
SURF4-203ENST00000371991 WDR97A6NE52 1622 aa24.25■■□□□ 1.47
SURF4-203ENST00000371991 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
SURF4-203ENST00000371991 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.46
SURF4-203ENST00000371991 FBLN2P98095 1184 aa24.19■■□□□ 1.46
SURF4-203ENST00000371991 SNAPC4Q5SXM2 1469 aa24.14■■□□□ 1.46
SURF4-203ENST00000371991 GRIN2BQ13224 1484 aa24.1■■□□□ 1.45
SURF4-203ENST00000371991 MAGI1Q96QZ7 1491 aaPredicted RBP24.1■■□□□ 1.45
SURF4-203ENST00000371991 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
SURF4-203ENST00000371991 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
SURF4-203ENST00000371991 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
SURF4-203ENST00000371991 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
SURF4-203ENST00000371991 CLASP1Q7Z460 1538 aa24.03■■□□□ 1.44
SURF4-203ENST00000371991 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
SURF4-203ENST00000371991 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
SURF4-203ENST00000371991 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
SURF4-203ENST00000371991 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
SURF4-203ENST00000371991 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
SURF4-203ENST00000371991 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
SURF4-203ENST00000371991 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
SURF4-203ENST00000371991 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
SURF4-203ENST00000371991 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
SURF4-203ENST00000371991 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
SURF4-203ENST00000371991 TRHP20396 242 aaPredicted RBP23.78■■□□□ 1.4
SURF4-203ENST00000371991 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
SURF4-203ENST00000371991 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
SURF4-203ENST00000371991 CEP170Q5SW79 1584 aa23.71■■□□□ 1.39
SURF4-203ENST00000371991 NUP160Q12769 1436 aa23.71■■□□□ 1.39
SURF4-203ENST00000371991 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
SURF4-203ENST00000371991 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
SURF4-203ENST00000371991 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
SURF4-203ENST00000371991 JPH4Q96JJ6 628 aa23.46■■□□□ 1.35
SURF4-203ENST00000371991 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
SURF4-203ENST00000371991 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms