RNA–Protein interactions for RNA: ENST00000371982.3

SURF4-201, Transcript of surfeit 4, humanhuman

TSL 3

Gene SURF4, Length 553 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-201ENST00000371982 NISCHQ9Y2I1 1504 aa37.36■■■■□ 3.57
SURF4-201ENST00000371982 ABCC9O60706 1549 aa33.79■■■■□ 3
SURF4-201ENST00000371982 CCDC180Q9P1Z9 1646 aa33.57■■■□□ 2.97
SURF4-201ENST00000371982 RB1CC1Q8TDY2 1594 aa32.1■■■□□ 2.73
SURF4-201ENST00000371982 DNAJC5BQ9UF47 199 aa31.88■■■□□ 2.69
SURF4-201ENST00000371982 NACADO15069 1562 aa31.85■■■□□ 2.69
SURF4-201ENST00000371982 DCAF8L2P0C7V8 631 aa31.65■■■□□ 2.66
SURF4-201ENST00000371982 PABPN1Q86U42 306 aaKnown RBP eCLIP31.44■■■□□ 2.62
SURF4-201ENST00000371982 MYO15BQ96JP2 1530 aa31.38■■■□□ 2.61
SURF4-201ENST00000371982 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
SURF4-201ENST00000371982 BICRAQ9NZM4 1560 aa31.11■■■□□ 2.57
SURF4-201ENST00000371982 ZCCHC6Q5VYS8 1495 aaKnown RBP30.91■■■□□ 2.54
SURF4-201ENST00000371982 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
SURF4-201ENST00000371982 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
SURF4-201ENST00000371982 SCRIBQ14160 1630 aa30.55■■■□□ 2.48
SURF4-201ENST00000371982 CC2D2AQ9P2K1 1620 aa30.49■■■□□ 2.47
SURF4-201ENST00000371982 CECR2Q9BXF3 1484 aa30.49■■■□□ 2.47
SURF4-201ENST00000371982 EIF4G1Q04637 1599 aaKnown RBP30.4■■■□□ 2.46
SURF4-201ENST00000371982 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
SURF4-201ENST00000371982 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
SURF4-201ENST00000371982 ATAD2BQ9ULI0 1458 aa29.28■■■□□ 2.28
SURF4-201ENST00000371982 CUX2O14529 1486 aa29.27■■■□□ 2.28
SURF4-201ENST00000371982 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
SURF4-201ENST00000371982 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
SURF4-201ENST00000371982 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
SURF4-201ENST00000371982 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
SURF4-201ENST00000371982 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
SURF4-201ENST00000371982 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
SURF4-201ENST00000371982 NESP48681 1621 aa28.94■■■□□ 2.22
SURF4-201ENST00000371982 PEG3Q9GZU2 1588 aa28.9■■■□□ 2.22
SURF4-201ENST00000371982 LAMC3Q9Y6N6 1575 aa28.76■■■□□ 2.19
SURF4-201ENST00000371982 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
SURF4-201ENST00000371982 THOC2Q8NI27 1593 aaKnown RBP28.68■■■□□ 2.18
SURF4-201ENST00000371982 PDS5BQ9NTI5 1447 aa28.66■■■□□ 2.18
SURF4-201ENST00000371982 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
SURF4-201ENST00000371982 KIF21AQ7Z4S6 1674 aa28.51■■■□□ 2.15
SURF4-201ENST00000371982 MRC2Q9UBG0 1479 aa28.38■■■□□ 2.13
SURF4-201ENST00000371982 WIZO95785 1651 aa28.35■■■□□ 2.13
SURF4-201ENST00000371982 WDR62O43379 1518 aa28.29■■■□□ 2.12
SURF4-201ENST00000371982 CEP164Q9UPV0 1460 aa28.22■■■□□ 2.11
SURF4-201ENST00000371982 FANCD2Q9BXW9 1451 aa28.17■■■□□ 2.1
SURF4-201ENST00000371982 CFTRP13569 1480 aa28.15■■■□□ 2.1
SURF4-201ENST00000371982 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
SURF4-201ENST00000371982 TRIM41Q8WV44 630 aa28.08■■■□□ 2.09
SURF4-201ENST00000371982 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
SURF4-201ENST00000371982 OSCARQ8IYS5 282 aa27.93■■■□□ 2.06
SURF4-201ENST00000371982 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
SURF4-201ENST00000371982 CCDC88BA6NC98 1476 aa27.73■■■□□ 2.03
SURF4-201ENST00000371982 PRDM2Q13029 1718 aa27.71■■■□□ 2.03
SURF4-201ENST00000371982 IFT140Q96RY7 1462 aa27.69■■■□□ 2.02
SURF4-201ENST00000371982 TOPBP1Q92547 1522 aa27.6■■■□□ 2.01
SURF4-201ENST00000371982 ZNF608Q9ULD9 1512 aaPredicted RBP27.6■■■□□ 2.01
SURF4-201ENST00000371982 ABCC8Q09428 1581 aa27.6■■■□□ 2.01
SURF4-201ENST00000371982 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
SURF4-201ENST00000371982 RIMBP3CA6NJZ7 1639 aa27.47■■□□□ 1.99
SURF4-201ENST00000371982 RIMBP3BA6NNM3 1639 aa27.47■■□□□ 1.99
SURF4-201ENST00000371982 RIMBP3Q9UFD9 1639 aa27.47■■□□□ 1.99
SURF4-201ENST00000371982 EIF4G3O43432 1585 aaKnown RBP27.42■■□□□ 1.98
SURF4-201ENST00000371982 ARHGEF11O15085 1522 aa27.41■■□□□ 1.98
SURF4-201ENST00000371982 AQRO60306 1485 aaKnown RBP eCLIP27.35■■□□□ 1.978e-8■■■■■ 29.7
SURF4-201ENST00000371982 TARBP1Q13395 1621 aaKnown RBP27.34■■□□□ 1.97
SURF4-201ENST00000371982 POLA1P09884 1462 aaPredicted RBP27.31■■□□□ 1.96
SURF4-201ENST00000371982 CYB5RLQ6IPT4 315 aa27.26■■□□□ 1.95
SURF4-201ENST00000371982 FBLN2P98095 1184 aa27.25■■□□□ 1.95
SURF4-201ENST00000371982 SOGA1O94964 1423 aa27.21■■□□□ 1.95
SURF4-201ENST00000371982 CHD1O14646 1710 aa27.2■■□□□ 1.94
SURF4-201ENST00000371982 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
SURF4-201ENST00000371982 TDRD9Q8NDG6 1382 aaKnown RBP27.16■■□□□ 1.94
SURF4-201ENST00000371982 ARAP1Q96P48 1450 aa27.12■■□□□ 1.93
SURF4-201ENST00000371982 WDR97A6NE52 1622 aa27.11■■□□□ 1.93
SURF4-201ENST00000371982 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
SURF4-201ENST00000371982 SNAPC4Q5SXM2 1469 aa27.06■■□□□ 1.92
SURF4-201ENST00000371982 CHMP7Q8WUX9 453 aaPredicted RBP27.05■■□□□ 1.92
SURF4-201ENST00000371982 TRHP20396 242 aaPredicted RBP27.03■■□□□ 1.92
SURF4-201ENST00000371982 CUX1P39880 1505 aa27.02■■□□□ 1.92
SURF4-201ENST00000371982 MAGI1Q96QZ7 1491 aaPredicted RBP27.02■■□□□ 1.92
SURF4-201ENST00000371982 GRIN2BQ13224 1484 aa27■■□□□ 1.91
SURF4-201ENST00000371982 CLASP1Q7Z460 1538 aa26.96■■□□□ 1.91
SURF4-201ENST00000371982 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
SURF4-201ENST00000371982 SYNJ2O15056 1496 aa26.93■■□□□ 1.9
SURF4-201ENST00000371982 GAPVD1Q14C86 1478 aa26.87■■□□□ 1.89
SURF4-201ENST00000371982 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
SURF4-201ENST00000371982 PBRM1Q86U86 1689 aa26.76■■□□□ 1.87
SURF4-201ENST00000371982 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
SURF4-201ENST00000371982 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
SURF4-201ENST00000371982 WRNQ14191 1432 aaPredicted RBP eCLIP26.69■■□□□ 1.86
SURF4-201ENST00000371982 GRIN2AQ12879 1464 aa26.62■■□□□ 1.85
SURF4-201ENST00000371982 NUP160Q12769 1436 aa26.56■■□□□ 1.84
SURF4-201ENST00000371982 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
SURF4-201ENST00000371982 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
SURF4-201ENST00000371982 FHAD1B1AJZ9 1412 aa26.54■■□□□ 1.84
SURF4-201ENST00000371982 BIVM-ERCC5R4GMW8 1640 aa26.52■■□□□ 1.84
SURF4-201ENST00000371982 CEP170Q5SW79 1584 aa26.5■■□□□ 1.83
SURF4-201ENST00000371982 ERCC6L2Q5T890 1561 aa26.48■■□□□ 1.83
SURF4-201ENST00000371982 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
SURF4-201ENST00000371982 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
SURF4-201ENST00000371982 SHROOM2Q13796 1616 aa26.41■■□□□ 1.82
SURF4-201ENST00000371982 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
SURF4-201ENST00000371982 PRG4Q92954 1404 aaPredicted RBP26.32■■□□□ 1.8
SURF4-201ENST00000371982 NPM1P06748 294 aaKnown RBP eCLIP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms