RNA–Protein interactions for RNA: ENST00000371870.3

CMPK1-201, Transcript of cytidine/uridine monophosphate kinase 1, humanhuman

TSL 2

Gene CMPK1, Length 812 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMPK1-201ENST00000371870 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
CMPK1-201ENST00000371870 ABCC9O60706 1549 aa42.17■■■■■ 4.34
CMPK1-201ENST00000371870 CCDC180Q9P1Z9 1646 aa41.98■■■■■ 4.31
CMPK1-201ENST00000371870 RB1CC1Q8TDY2 1594 aa40.05■■■■■ 4
CMPK1-201ENST00000371870 NACADO15069 1562 aa39.77■■■■□ 3.96
CMPK1-201ENST00000371870 DNAJC5BQ9UF47 199 aa39.75■■■■□ 3.95
CMPK1-201ENST00000371870 DCAF8L2P0C7V8 631 aa39.63■■■■□ 3.93
CMPK1-201ENST00000371870 PABPN1Q86U42 306 aaKnown RBP eCLIP39.31■■■■□ 3.88
CMPK1-201ENST00000371870 MYO15BQ96JP2 1530 aa39.2■■■■□ 3.87
CMPK1-201ENST00000371870 UNC13AQ9UPW8 1703 aa39.12■■■■□ 3.85
CMPK1-201ENST00000371870 BICRAQ9NZM4 1560 aa38.93■■■■□ 3.82
CMPK1-201ENST00000371870 ZCCHC6Q5VYS8 1495 aaKnown RBP38.78■■■■□ 3.8
CMPK1-201ENST00000371870 DCAF1Q9Y4B6 1507 aa38.67■■■■□ 3.78
CMPK1-201ENST00000371870 SHROOM4Q9ULL8 1493 aa38.35■■■■□ 3.73
CMPK1-201ENST00000371870 SCRIBQ14160 1630 aa38.3■■■■□ 3.72
CMPK1-201ENST00000371870 CC2D2AQ9P2K1 1620 aa38.06■■■■□ 3.68
CMPK1-201ENST00000371870 CECR2Q9BXF3 1484 aa38■■■■□ 3.67
CMPK1-201ENST00000371870 EIF4G1Q04637 1599 aaKnown RBP37.96■■■■□ 3.67
CMPK1-201ENST00000371870 NCAPD3P42695 1498 aa36.76■■■■□ 3.48
CMPK1-201ENST00000371870 ATAD2BQ9ULI0 1458 aa36.63■■■■□ 3.45
CMPK1-201ENST00000371870 DNAJC5Q9H3Z4 198 aa36.54■■■■□ 3.44
CMPK1-201ENST00000371870 SMARCA4P51532 1647 aa36.52■■■■□ 3.44
CMPK1-201ENST00000371870 SMARCA2P51531 1590 aa36.48■■■■□ 3.43
CMPK1-201ENST00000371870 HMGXB3Q12766 1538 aa36.42■■■■□ 3.42
CMPK1-201ENST00000371870 ERCC6Q03468 1493 aa36.39■■■■□ 3.42
CMPK1-201ENST00000371870 CUX2O14529 1486 aa36.36■■■■□ 3.41
CMPK1-201ENST00000371870 BAZ1AQ9NRL2 1556 aaPredicted RBP36.33■■■■□ 3.41
CMPK1-201ENST00000371870 BAZ1BQ9UIG0 1483 aaKnown RBP36.24■■■■□ 3.39
CMPK1-201ENST00000371870 NESP48681 1621 aa36.22■■■■□ 3.39
CMPK1-201ENST00000371870 PEG3Q9GZU2 1588 aa36.18■■■■□ 3.38
CMPK1-201ENST00000371870 MROH2BQ7Z745 1585 aa36.1■■■■□ 3.37
CMPK1-201ENST00000371870 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
CMPK1-201ENST00000371870 THOC2Q8NI27 1593 aaKnown RBP35.81■■■■□ 3.32
CMPK1-201ENST00000371870 PDS5BQ9NTI5 1447 aa35.73■■■■□ 3.31
CMPK1-201ENST00000371870 KIF21AQ7Z4S6 1674 aa35.67■■■■□ 3.3
CMPK1-201ENST00000371870 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
CMPK1-201ENST00000371870 WIZO95785 1651 aa35.63■■■■□ 3.29
CMPK1-201ENST00000371870 MRC2Q9UBG0 1479 aa35.41■■■■□ 3.26
CMPK1-201ENST00000371870 RSF1Q96T23 1441 aaPredicted RBP35.34■■■■□ 3.25
CMPK1-201ENST00000371870 WDR62O43379 1518 aa35.32■■■■□ 3.24
CMPK1-201ENST00000371870 CEP164Q9UPV0 1460 aa35.24■■■■□ 3.23
CMPK1-201ENST00000371870 FANCD2Q9BXW9 1451 aa35.22■■■■□ 3.23
CMPK1-201ENST00000371870 CFTRP13569 1480 aa35.21■■■■□ 3.23
CMPK1-201ENST00000371870 TOP2AP11388 1531 aaKnown RBP35.16■■■■□ 3.22
CMPK1-201ENST00000371870 URB2Q14146 1524 aaKnown RBP34.95■■■■□ 3.19
CMPK1-201ENST00000371870 TRIM41Q8WV44 630 aa34.87■■■■□ 3.17
CMPK1-201ENST00000371870 CCDC88BA6NC98 1476 aa34.83■■■■□ 3.17
CMPK1-201ENST00000371870 OSCARQ8IYS5 282 aa34.75■■■■□ 3.15
CMPK1-201ENST00000371870 PRDM2Q13029 1718 aa34.72■■■■□ 3.15
CMPK1-201ENST00000371870 IFT140Q96RY7 1462 aa34.56■■■■□ 3.12
CMPK1-201ENST00000371870 TOPBP1Q92547 1522 aa34.54■■■■□ 3.12
CMPK1-201ENST00000371870 ZNF608Q9ULD9 1512 aaPredicted RBP34.54■■■■□ 3.12
CMPK1-201ENST00000371870 ABCC8Q09428 1581 aa34.44■■■■□ 3.1
CMPK1-201ENST00000371870 DNMBPQ6XZF7 1577 aa34.37■■■■□ 3.09
CMPK1-201ENST00000371870 EIF4G3O43432 1585 aaKnown RBP34.28■■■■□ 3.08
CMPK1-201ENST00000371870 RIMBP3CA6NJZ7 1639 aa34.24■■■■□ 3.07
CMPK1-201ENST00000371870 RIMBP3BA6NNM3 1639 aa34.24■■■■□ 3.07
CMPK1-201ENST00000371870 RIMBP3Q9UFD9 1639 aa34.24■■■■□ 3.07
CMPK1-201ENST00000371870 TARBP1Q13395 1621 aaKnown RBP34.23■■■■□ 3.07
CMPK1-201ENST00000371870 AQRO60306 1485 aaKnown RBP eCLIP34.23■■■■□ 3.07
CMPK1-201ENST00000371870 POLA1P09884 1462 aaPredicted RBP34.18■■■■□ 3.06
CMPK1-201ENST00000371870 ARHGEF11O15085 1522 aa34.14■■■■□ 3.06
CMPK1-201ENST00000371870 RAD54L2Q9Y4B4 1467 aa34.08■■■■□ 3.05
CMPK1-201ENST00000371870 SOGA1O94964 1423 aa34.05■■■■□ 3.04
CMPK1-201ENST00000371870 CHD1O14646 1710 aa34.02■■■■□ 3.04
CMPK1-201ENST00000371870 FBLN2P98095 1184 aa34.02■■■■□ 3.04
CMPK1-201ENST00000371870 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
CMPK1-201ENST00000371870 CYB5RLQ6IPT4 315 aa33.96■■■■□ 3.03
CMPK1-201ENST00000371870 FGD5Q6ZNL6 1462 aa33.95■■■■□ 3.02
CMPK1-201ENST00000371870 CUX1P39880 1505 aa33.91■■■■□ 3.02
CMPK1-201ENST00000371870 SNAPC4Q5SXM2 1469 aa33.83■■■■□ 3.01
CMPK1-201ENST00000371870 WDR97A6NE52 1622 aa33.82■■■■□ 3.01
CMPK1-201ENST00000371870 ARAP1Q96P48 1450 aa33.81■■■■□ 3
CMPK1-201ENST00000371870 CHMP7Q8WUX9 453 aaPredicted RBP33.76■■■□□ 2.99
CMPK1-201ENST00000371870 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
CMPK1-201ENST00000371870 MAGI1Q96QZ7 1491 aaPredicted RBP33.74■■■□□ 2.99
CMPK1-201ENST00000371870 SUPT5HO00267 1087 aaKnown RBP33.72■■■□□ 2.99
CMPK1-201ENST00000371870 CLASP1Q7Z460 1538 aa33.68■■■□□ 2.98
CMPK1-201ENST00000371870 SYNJ2O15056 1496 aa33.63■■■□□ 2.97
CMPK1-201ENST00000371870 SYNJ1O43426 1573 aa33.62■■■□□ 2.97
CMPK1-201ENST00000371870 GAPVD1Q14C86 1478 aa33.61■■■□□ 2.97
CMPK1-201ENST00000371870 TRHP20396 242 aaPredicted RBP33.58■■■□□ 2.97
CMPK1-201ENST00000371870 ABCA10Q8WWZ4 1543 aa33.56■■■□□ 2.96
CMPK1-201ENST00000371870 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
CMPK1-201ENST00000371870 ABCA5Q8WWZ7 1642 aa33.49■■■□□ 2.95
CMPK1-201ENST00000371870 WRNQ14191 1432 aaPredicted RBP eCLIP33.42■■■□□ 2.94
CMPK1-201ENST00000371870 TOP2BQ02880 1626 aa33.31■■■□□ 2.92
CMPK1-201ENST00000371870 GRIN2AQ12879 1464 aa33.31■■■□□ 2.92
CMPK1-201ENST00000371870 BIVM-ERCC5R4GMW8 1640 aa33.29■■■□□ 2.92
CMPK1-201ENST00000371870 ADAMTS12P58397 1594 aa33.24■■■□□ 2.91
CMPK1-201ENST00000371870 NUP160Q12769 1436 aa33.2■■■□□ 2.91
CMPK1-201ENST00000371870 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
CMPK1-201ENST00000371870 CEP170Q5SW79 1584 aa33.18■■■□□ 2.9
CMPK1-201ENST00000371870 ERCC6L2Q5T890 1561 aa33.17■■■□□ 2.9
CMPK1-201ENST00000371870 ERICH3Q5RHP9 1530 aa33.12■■■□□ 2.89
CMPK1-201ENST00000371870 SHROOM2Q13796 1616 aa33.03■■■□□ 2.88
CMPK1-201ENST00000371870 JPH4Q96JJ6 628 aa32.91■■■□□ 2.86
CMPK1-201ENST00000371870 PRG4Q92954 1404 aaPredicted RBP32.91■■■□□ 2.86
CMPK1-201ENST00000371870 RUSC2Q8N2Y8 1516 aa32.77■■■□□ 2.84
CMPK1-201ENST00000371870 IGF1RP08069 1367 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms