RNA–Protein interactions for RNA: ENST00000371822.9

WDR44-202, Transcript of WD repeat domain 44, humanhuman

TSL 2 BASIC

Gene WDR44, Length 3,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR44-202ENST00000371822 NISCHQ9Y2I1 1504 aa16.03■□□□□ 0.16
WDR44-202ENST00000371822 DCAF8L2P0C7V8 631 aa14.26□□□□□ -0.13
WDR44-202ENST00000371822 ABCC9O60706 1549 aa13.98□□□□□ -0.17
WDR44-202ENST00000371822 CCDC180Q9P1Z9 1646 aa13.83□□□□□ -0.2
WDR44-202ENST00000371822 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
WDR44-202ENST00000371822 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
WDR44-202ENST00000371822 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
WDR44-202ENST00000371822 RB1CC1Q8TDY2 1594 aa13.18□□□□□ -0.3
WDR44-202ENST00000371822 NACADO15069 1562 aa13.13□□□□□ -0.31
WDR44-202ENST00000371822 SCRIBQ14160 1630 aa13.11□□□□□ -0.31
WDR44-202ENST00000371822 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
WDR44-202ENST00000371822 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
WDR44-202ENST00000371822 MYO15BQ96JP2 1530 aa12.89□□□□□ -0.35
WDR44-202ENST00000371822 UNC13AQ9UPW8 1703 aa12.67□□□□□ -0.38
WDR44-202ENST00000371822 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
WDR44-202ENST00000371822 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
WDR44-202ENST00000371822 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
WDR44-202ENST00000371822 HRCP23327 699 aa12.59□□□□□ -0.39
WDR44-202ENST00000371822 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.4
WDR44-202ENST00000371822 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.41
WDR44-202ENST00000371822 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
WDR44-202ENST00000371822 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
WDR44-202ENST00000371822 RSF1Q96T23 1441 aaPredicted RBP12.44□□□□□ -0.42
WDR44-202ENST00000371822 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
WDR44-202ENST00000371822 CC2D2AQ9P2K1 1620 aa12.36□□□□□ -0.43
WDR44-202ENST00000371822 BAZ1BQ9UIG0 1483 aaKnown RBP12.34□□□□□ -0.43
WDR44-202ENST00000371822 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
WDR44-202ENST00000371822 ATAD2BQ9ULI0 1458 aa12.32□□□□□ -0.44
WDR44-202ENST00000371822 WIZO95785 1651 aa12.32□□□□□ -0.44
WDR44-202ENST00000371822 SMARCA2P51531 1590 aa12.24□□□□□ -0.45
WDR44-202ENST00000371822 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
WDR44-202ENST00000371822 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
WDR44-202ENST00000371822 CHIC1Q5VXU3 224 aa12.16□□□□□ -0.46
WDR44-202ENST00000371822 EHMT2Q96KQ7 1210 aa12.16□□□□□ -0.46
WDR44-202ENST00000371822 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
WDR44-202ENST00000371822 FAM9AQ8IZU1 332 aaPredicted RBP12.1□□□□□ -0.47
WDR44-202ENST00000371822 TOP2AP11388 1531 aaKnown RBP12.08□□□□□ -0.47
WDR44-202ENST00000371822 NESP48681 1621 aa12.08□□□□□ -0.48
WDR44-202ENST00000371822 TRIM41Q8WV44 630 aa12.07□□□□□ -0.48
WDR44-202ENST00000371822 ERCC6Q03468 1493 aa12.07□□□□□ -0.48
WDR44-202ENST00000371822 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
WDR44-202ENST00000371822 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
WDR44-202ENST00000371822 CADPSQ9ULU8 1353 aa12.03□□□□□ -0.48
WDR44-202ENST00000371822 PEG3Q9GZU2 1588 aa11.99□□□□□ -0.49
WDR44-202ENST00000371822 TRIM26Q12899 539 aaPredicted RBP11.97□□□□□ -0.49
WDR44-202ENST00000371822 PDS5BQ9NTI5 1447 aa11.94□□□□□ -0.5
WDR44-202ENST00000371822 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
WDR44-202ENST00000371822 ZEB1P37275 1124 aaPredicted RBP11.9□□□□□ -0.5
WDR44-202ENST00000371822 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
WDR44-202ENST00000371822 RANGAP1P46060 587 aaPredicted RBP11.88□□□□□ -0.51
WDR44-202ENST00000371822 FBLN2P98095 1184 aa11.88□□□□□ -0.51
WDR44-202ENST00000371822 CFTRP13569 1480 aa11.86□□□□□ -0.51
WDR44-202ENST00000371822 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
WDR44-202ENST00000371822 ABCC8Q09428 1581 aa11.85□□□□□ -0.51
WDR44-202ENST00000371822 WRNQ14191 1432 aaPredicted RBP eCLIP11.82□□□□□ -0.52
WDR44-202ENST00000371822 MYT1Q01538 1121 aa11.78□□□□□ -0.52
WDR44-202ENST00000371822 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
WDR44-202ENST00000371822 TTBK1Q5TCY1 1321 aaPredicted RBP11.76□□□□□ -0.53
WDR44-202ENST00000371822 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
WDR44-202ENST00000371822 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
WDR44-202ENST00000371822 SOGA1O94964 1423 aa11.7□□□□□ -0.54
WDR44-202ENST00000371822 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
WDR44-202ENST00000371822 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
WDR44-202ENST00000371822 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
WDR44-202ENST00000371822 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
WDR44-202ENST00000371822 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
WDR44-202ENST00000371822 ACIN1Q9UKV3 1341 aaKnown RBP11.67□□□□□ -0.54
WDR44-202ENST00000371822 URB2Q14146 1524 aaKnown RBP11.67□□□□□ -0.54
WDR44-202ENST00000371822 FGD5Q6ZNL6 1462 aa11.66□□□□□ -0.54
WDR44-202ENST00000371822 NEUROD1Q13562 356 aa11.66□□□□□ -0.54
WDR44-202ENST00000371822 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
WDR44-202ENST00000371822 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
WDR44-202ENST00000371822 CUX2O14529 1486 aa11.65□□□□□ -0.54
WDR44-202ENST00000371822 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
WDR44-202ENST00000371822 CUX1P39880 1505 aa11.63□□□□□ -0.55
WDR44-202ENST00000371822 CSRNP3Q8WYN3 585 aa11.62□□□□□ -0.55
WDR44-202ENST00000371822 CCER1Q8TC90 406 aaPredicted RBP11.62□□□□□ -0.55
WDR44-202ENST00000371822 SYNJ1O43426 1573 aa11.61□□□□□ -0.55
WDR44-202ENST00000371822 POLA1P09884 1462 aaPredicted RBP11.61□□□□□ -0.55
WDR44-202ENST00000371822 ATP1B4Q9UN42 357 aaPredicted RBP11.58□□□□□ -0.56
WDR44-202ENST00000371822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.58□□□□□ -0.56
WDR44-202ENST00000371822 RUSC2Q8N2Y8 1516 aa11.57□□□□□ -0.56
WDR44-202ENST00000371822 ZNF608Q9ULD9 1512 aaPredicted RBP11.56□□□□□ -0.56
WDR44-202ENST00000371822 KIF27Q86VH2 1401 aa11.56□□□□□ -0.56
WDR44-202ENST00000371822 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
WDR44-202ENST00000371822 P3H3Q8IVL6 736 aa11.56□□□□□ -0.56
WDR44-202ENST00000371822 DIEXFQ68CQ4 756 aaKnown RBP11.55□□□□□ -0.56
WDR44-202ENST00000371822 YTHDC1Q96MU7 727 aaKnown RBP11.55□□□□□ -0.56
WDR44-202ENST00000371822 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
WDR44-202ENST00000371822 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
WDR44-202ENST00000371822 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
WDR44-202ENST00000371822 ARID3CA6NKF2 412 aa11.49□□□□□ -0.57
WDR44-202ENST00000371822 WDR62O43379 1518 aa11.48□□□□□ -0.57
WDR44-202ENST00000371822 CARMIL1Q5VZK9 1371 aa11.48□□□□□ -0.57
WDR44-202ENST00000371822 THOC2Q8NI27 1593 aaKnown RBP11.47□□□□□ -0.57
WDR44-202ENST00000371822 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
WDR44-202ENST00000371822 PRDM2Q13029 1718 aa11.45□□□□□ -0.58
WDR44-202ENST00000371822 IGF1RP08069 1367 aa11.44□□□□□ -0.58
WDR44-202ENST00000371822 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
WDR44-202ENST00000371822 SNAPC4Q5SXM2 1469 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms