RNA–Protein interactions for RNA: ENST00000371178.5

TM2D1-203, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-203ENST00000371178 NISCHQ9Y2I1 1504 aa34.72■■■■□ 3.15
TM2D1-203ENST00000371178 CCDC180Q9P1Z9 1646 aa31.09■■■□□ 2.57
TM2D1-203ENST00000371178 ABCC9O60706 1549 aa30.88■■■□□ 2.53
TM2D1-203ENST00000371178 RB1CC1Q8TDY2 1594 aa29.54■■■□□ 2.32
TM2D1-203ENST00000371178 NACADO15069 1562 aa29.37■■■□□ 2.29
TM2D1-203ENST00000371178 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
TM2D1-203ENST00000371178 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
TM2D1-203ENST00000371178 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
TM2D1-203ENST00000371178 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.2
TM2D1-203ENST00000371178 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
TM2D1-203ENST00000371178 DCAF1Q9Y4B6 1507 aa28.71■■■□□ 2.19
TM2D1-203ENST00000371178 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
TM2D1-203ENST00000371178 BICRAQ9NZM4 1560 aa28.52■■■□□ 2.16
TM2D1-203ENST00000371178 AEBP2Q6ZN18 517 aaPredicted RBP28.36■■■□□ 2.13
TM2D1-203ENST00000371178 SCRIBQ14160 1630 aa28.33■■■□□ 2.13
TM2D1-203ENST00000371178 SHROOM4Q9ULL8 1493 aa28.33■■■□□ 2.13
TM2D1-203ENST00000371178 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.05
TM2D1-203ENST00000371178 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.05
TM2D1-203ENST00000371178 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.04
TM2D1-203ENST00000371178 CHIC1Q5VXU3 224 aa27.55■■■□□ 2
TM2D1-203ENST00000371178 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
TM2D1-203ENST00000371178 SMARCA4P51532 1647 aa27.04■■□□□ 1.92
TM2D1-203ENST00000371178 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
TM2D1-203ENST00000371178 SMARCA2P51531 1590 aa27.01■■□□□ 1.92
TM2D1-203ENST00000371178 BAZ1AQ9NRL2 1556 aaPredicted RBP26.99■■□□□ 1.91
TM2D1-203ENST00000371178 HMGXB3Q12766 1538 aa26.91■■□□□ 1.9
TM2D1-203ENST00000371178 BAZ1BQ9UIG0 1483 aaKnown RBP26.83■■□□□ 1.89
TM2D1-203ENST00000371178 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
TM2D1-203ENST00000371178 ERCC6Q03468 1493 aa26.75■■□□□ 1.87
TM2D1-203ENST00000371178 MROH2BQ7Z745 1585 aa26.71■■□□□ 1.87
TM2D1-203ENST00000371178 CUX2O14529 1486 aa26.59■■□□□ 1.85
TM2D1-203ENST00000371178 NESP48681 1621 aa26.54■■□□□ 1.84
TM2D1-203ENST00000371178 LAMC3Q9Y6N6 1575 aa26.47■■□□□ 1.83
TM2D1-203ENST00000371178 WIZO95785 1651 aa26.41■■□□□ 1.82
TM2D1-203ENST00000371178 PDS5BQ9NTI5 1447 aa26.37■■□□□ 1.81
TM2D1-203ENST00000371178 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
TM2D1-203ENST00000371178 DNAJC5Q9H3Z4 198 aa26.29■■□□□ 1.8
TM2D1-203ENST00000371178 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
TM2D1-203ENST00000371178 THOC2Q8NI27 1593 aaKnown RBP26.23■■□□□ 1.79
TM2D1-203ENST00000371178 KIF21AQ7Z4S6 1674 aa26.2■■□□□ 1.78
TM2D1-203ENST00000371178 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
TM2D1-203ENST00000371178 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
TM2D1-203ENST00000371178 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
TM2D1-203ENST00000371178 CFTRP13569 1480 aa26.01■■□□□ 1.75
TM2D1-203ENST00000371178 FANCD2Q9BXW9 1451 aa26■■□□□ 1.75
TM2D1-203ENST00000371178 WDR62O43379 1518 aa25.97■■□□□ 1.75
TM2D1-203ENST00000371178 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
TM2D1-203ENST00000371178 PRDM2Q13029 1718 aa25.76■■□□□ 1.71
TM2D1-203ENST00000371178 URB2Q14146 1524 aaKnown RBP25.7■■□□□ 1.7
TM2D1-203ENST00000371178 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
TM2D1-203ENST00000371178 IFT140Q96RY7 1462 aa25.51■■□□□ 1.67
TM2D1-203ENST00000371178 TOPBP1Q92547 1522 aa25.5■■□□□ 1.67
TM2D1-203ENST00000371178 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
TM2D1-203ENST00000371178 OSCARQ8IYS5 282 aa25.44■■□□□ 1.66
TM2D1-203ENST00000371178 ZNF608Q9ULD9 1512 aaPredicted RBP25.35■■□□□ 1.65
TM2D1-203ENST00000371178 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
TM2D1-203ENST00000371178 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
TM2D1-203ENST00000371178 EIF4G3O43432 1585 aaKnown RBP25.26■■□□□ 1.63
TM2D1-203ENST00000371178 POLA1P09884 1462 aaPredicted RBP25.25■■□□□ 1.63
TM2D1-203ENST00000371178 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
TM2D1-203ENST00000371178 SOGA1O94964 1423 aa25.19■■□□□ 1.62
TM2D1-203ENST00000371178 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.62
TM2D1-203ENST00000371178 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.61
TM2D1-203ENST00000371178 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
TM2D1-203ENST00000371178 CUX1P39880 1505 aa25.1■■□□□ 1.61
TM2D1-203ENST00000371178 FBLN2P98095 1184 aa25.08■■□□□ 1.61
TM2D1-203ENST00000371178 WDR97A6NE52 1622 aa25.08■■□□□ 1.6
TM2D1-203ENST00000371178 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
TM2D1-203ENST00000371178 CHD1O14646 1710 aa25■■□□□ 1.59
TM2D1-203ENST00000371178 RIMBP3CA6NJZ7 1639 aa24.99■■□□□ 1.59
TM2D1-203ENST00000371178 RIMBP3BA6NNM3 1639 aa24.99■■□□□ 1.59
TM2D1-203ENST00000371178 RIMBP3Q9UFD9 1639 aa24.99■■□□□ 1.59
TM2D1-203ENST00000371178 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
TM2D1-203ENST00000371178 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
TM2D1-203ENST00000371178 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
TM2D1-203ENST00000371178 CHMP7Q8WUX9 453 aaPredicted RBP24.94■■□□□ 1.58
TM2D1-203ENST00000371178 MAGI1Q96QZ7 1491 aaPredicted RBP24.94■■□□□ 1.58
TM2D1-203ENST00000371178 GAPVD1Q14C86 1478 aa24.88■■□□□ 1.57
TM2D1-203ENST00000371178 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
TM2D1-203ENST00000371178 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
TM2D1-203ENST00000371178 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
TM2D1-203ENST00000371178 SYNJ1O43426 1573 aa24.83■■□□□ 1.57
TM2D1-203ENST00000371178 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
TM2D1-203ENST00000371178 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
TM2D1-203ENST00000371178 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
TM2D1-203ENST00000371178 ABCA5Q8WWZ7 1642 aa24.78■■□□□ 1.56
TM2D1-203ENST00000371178 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
TM2D1-203ENST00000371178 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
TM2D1-203ENST00000371178 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
TM2D1-203ENST00000371178 GRIN2AQ12879 1464 aa24.6■■□□□ 1.53
TM2D1-203ENST00000371178 ADAMTS12P58397 1594 aa24.59■■□□□ 1.53
TM2D1-203ENST00000371178 FHAD1B1AJZ9 1412 aa24.59■■□□□ 1.53
TM2D1-203ENST00000371178 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
TM2D1-203ENST00000371178 TRHP20396 242 aaPredicted RBP24.53■■□□□ 1.52
TM2D1-203ENST00000371178 NUP160Q12769 1436 aa24.49■■□□□ 1.51
TM2D1-203ENST00000371178 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
TM2D1-203ENST00000371178 KIF27Q86VH2 1401 aa24.39■■□□□ 1.5
TM2D1-203ENST00000371178 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
TM2D1-203ENST00000371178 ERCC6L2Q5T890 1561 aa24.3■■□□□ 1.48
TM2D1-203ENST00000371178 JPH4Q96JJ6 628 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms