RNA–Protein interactions for RNA: ENST00000370782.6

MMS19-203, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMS19, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-203ENST00000370782 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
MMS19-203ENST00000370782 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
MMS19-203ENST00000370782 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
MMS19-203ENST00000370782 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
MMS19-203ENST00000370782 ABCC9O60706 1549 aa18.68■□□□□ 0.58
MMS19-203ENST00000370782 SHROOM4Q9ULL8 1493 aa18.5■□□□□ 0.55
MMS19-203ENST00000370782 HRCP23327 699 aa18.45■□□□□ 0.54
MMS19-203ENST00000370782 DCAF8L2P0C7V8 631 aa18.43■□□□□ 0.54
MMS19-203ENST00000370782 MYT1Q01538 1121 aa18.34■□□□□ 0.53
MMS19-203ENST00000370782 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
MMS19-203ENST00000370782 NACADO15069 1562 aa18.15■□□□□ 0.5
MMS19-203ENST00000370782 MYO15BQ96JP2 1530 aa18.13■□□□□ 0.49
MMS19-203ENST00000370782 RB1CC1Q8TDY2 1594 aa18.12■□□□□ 0.49
MMS19-203ENST00000370782 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
MMS19-203ENST00000370782 SCRIBQ14160 1630 aa17.88■□□□□ 0.45
MMS19-203ENST00000370782 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
MMS19-203ENST00000370782 PCGF6Q9BYE7 350 aa17.84■□□□□ 0.45
MMS19-203ENST00000370782 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
MMS19-203ENST00000370782 UNC13AQ9UPW8 1703 aa17.62■□□□□ 0.41
MMS19-203ENST00000370782 BICRAQ9NZM4 1560 aa17.5■□□□□ 0.39
MMS19-203ENST00000370782 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.384e-7■■■■□ 19.9
MMS19-203ENST00000370782 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
MMS19-203ENST00000370782 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.37
MMS19-203ENST00000370782 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
MMS19-203ENST00000370782 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
MMS19-203ENST00000370782 ACIN1Q9UKV3 1341 aaKnown RBP17.22■□□□□ 0.35
MMS19-203ENST00000370782 WIZO95785 1651 aa17.2■□□□□ 0.34
MMS19-203ENST00000370782 GTF3C3Q9Y5Q9 886 aa17.16■□□□□ 0.34
MMS19-203ENST00000370782 NEUROD1Q13562 356 aa17.14■□□□□ 0.33
MMS19-203ENST00000370782 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
MMS19-203ENST00000370782 CHIC1Q5VXU3 224 aa17.11■□□□□ 0.33
MMS19-203ENST00000370782 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
MMS19-203ENST00000370782 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
MMS19-203ENST00000370782 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
MMS19-203ENST00000370782 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
MMS19-203ENST00000370782 TRIM26Q12899 539 aaPredicted RBP17.01■□□□□ 0.31
MMS19-203ENST00000370782 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
MMS19-203ENST00000370782 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
MMS19-203ENST00000370782 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
MMS19-203ENST00000370782 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
MMS19-203ENST00000370782 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
MMS19-203ENST00000370782 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
MMS19-203ENST00000370782 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
MMS19-203ENST00000370782 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
MMS19-203ENST00000370782 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
MMS19-203ENST00000370782 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
MMS19-203ENST00000370782 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
MMS19-203ENST00000370782 LOC105371045A0A1W2PR82 267 aa16.7■□□□□ 0.26
MMS19-203ENST00000370782 HMGXB3Q12766 1538 aa16.67■□□□□ 0.26
MMS19-203ENST00000370782 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
MMS19-203ENST00000370782 ANP32EQ9BTT0 268 aa16.62■□□□□ 0.25
MMS19-203ENST00000370782 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
MMS19-203ENST00000370782 ABCC8Q09428 1581 aa16.59■□□□□ 0.25
MMS19-203ENST00000370782 TRIM41Q8WV44 630 aa16.58■□□□□ 0.24
MMS19-203ENST00000370782 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
MMS19-203ENST00000370782 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
MMS19-203ENST00000370782 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
MMS19-203ENST00000370782 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
MMS19-203ENST00000370782 SYNJ1O43426 1573 aa16.33■□□□□ 0.21
MMS19-203ENST00000370782 RUSC2Q8N2Y8 1516 aa16.32■□□□□ 0.2
MMS19-203ENST00000370782 SOGA1O94964 1423 aa16.3■□□□□ 0.2
MMS19-203ENST00000370782 CCER1Q8TC90 406 aaPredicted RBP16.3■□□□□ 0.2
MMS19-203ENST00000370782 APLP2Q06481 763 aa16.29■□□□□ 0.2
MMS19-203ENST00000370782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
MMS19-203ENST00000370782 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.19
MMS19-203ENST00000370782 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.19
MMS19-203ENST00000370782 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
MMS19-203ENST00000370782 TSHZ2Q9NRE2 1034 aa16.23■□□□□ 0.19
MMS19-203ENST00000370782 CFTRP13569 1480 aa16.22■□□□□ 0.19
MMS19-203ENST00000370782 NESP48681 1621 aa16.19■□□□□ 0.18
MMS19-203ENST00000370782 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
MMS19-203ENST00000370782 CUX1P39880 1505 aa16.14■□□□□ 0.17
MMS19-203ENST00000370782 ERCC6Q03468 1493 aa16.13■□□□□ 0.17
MMS19-203ENST00000370782 TOP2BQ02880 1626 aa16.13■□□□□ 0.17
MMS19-203ENST00000370782 SUPT16HQ9Y5B9 1047 aaKnown RBP16.11■□□□□ 0.17
MMS19-203ENST00000370782 BIVM-ERCC5R4GMW8 1640 aa16.1■□□□□ 0.17
MMS19-203ENST00000370782 PRDM2Q13029 1718 aa16.09■□□□□ 0.17
MMS19-203ENST00000370782 MIER1Q8N108 512 aa16.08■□□□□ 0.17
MMS19-203ENST00000370782 ZNF316A6NFI3 1004 aaPredicted RBP16.08■□□□□ 0.16
MMS19-203ENST00000370782 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
MMS19-203ENST00000370782 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
MMS19-203ENST00000370782 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.16
MMS19-203ENST00000370782 CLSPNQ9HAW4 1339 aa16■□□□□ 0.15
MMS19-203ENST00000370782 ANO8Q9HCE9 1232 aaPredicted RBP15.97■□□□□ 0.15
MMS19-203ENST00000370782 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.15
MMS19-203ENST00000370782 THOC2Q8NI27 1593 aaKnown RBP15.95■□□□□ 0.14
MMS19-203ENST00000370782 EEA1Q15075 1411 aa15.94■□□□□ 0.14
MMS19-203ENST00000370782 CUX2O14529 1486 aa15.93■□□□□ 0.14
MMS19-203ENST00000370782 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
MMS19-203ENST00000370782 WDR62O43379 1518 aa15.9■□□□□ 0.14
MMS19-203ENST00000370782 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
MMS19-203ENST00000370782 KIF21BO75037 1637 aa15.87■□□□□ 0.13
MMS19-203ENST00000370782 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
MMS19-203ENST00000370782 TNIKQ9UKE5 1360 aa15.86■□□□□ 0.13
MMS19-203ENST00000370782 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
MMS19-203ENST00000370782 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
MMS19-203ENST00000370782 UBTFP17480 764 aaKnown RBP15.84■□□□□ 0.13
MMS19-203ENST00000370782 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
MMS19-203ENST00000370782 TOPBP1Q92547 1522 aa15.83■□□□□ 0.13
MMS19-203ENST00000370782 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms