RNA–Protein interactions for RNA: ENST00000370622.5

ARHGEF6-203, Transcript of Rac/Cdc42 guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF6, Length 4,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF6-203ENST00000370622 NISCHQ9Y2I1 1504 aa11.51□□□□□ -0.57
ARHGEF6-203ENST00000370622 CCDC180Q9P1Z9 1646 aa10□□□□□ -0.81
ARHGEF6-203ENST00000370622 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.85
ARHGEF6-203ENST00000370622 ZCCHC6Q5VYS8 1495 aaKnown RBP9.65□□□□□ -0.87
ARHGEF6-203ENST00000370622 ABCC9O60706 1549 aa9.59□□□□□ -0.87
ARHGEF6-203ENST00000370622 SHROOM4Q9ULL8 1493 aa9.5□□□□□ -0.89
ARHGEF6-203ENST00000370622 DCAF1Q9Y4B6 1507 aa9.48□□□□□ -0.89
ARHGEF6-203ENST00000370622 MYO15BQ96JP2 1530 aa9.37□□□□□ -0.91
ARHGEF6-203ENST00000370622 NACADO15069 1562 aa9.36□□□□□ -0.91
ARHGEF6-203ENST00000370622 RB1CC1Q8TDY2 1594 aa9.3□□□□□ -0.92
ARHGEF6-203ENST00000370622 SCRIBQ14160 1630 aa9.26□□□□□ -0.93
ARHGEF6-203ENST00000370622 SUPT5HO00267 1087 aaKnown RBP9.17□□□□□ -0.94
ARHGEF6-203ENST00000370622 PABPN1Q86U42 306 aaKnown RBP eCLIP9.07□□□□□ -0.96
ARHGEF6-203ENST00000370622 UNC13AQ9UPW8 1703 aa9.02□□□□□ -0.96
ARHGEF6-203ENST00000370622 CECR2Q9BXF3 1484 aa8.96□□□□□ -0.98
ARHGEF6-203ENST00000370622 BICRAQ9NZM4 1560 aa8.96□□□□□ -0.98
ARHGEF6-203ENST00000370622 RSF1Q96T23 1441 aaPredicted RBP8.94□□□□□ -0.98
ARHGEF6-203ENST00000370622 BAZ1AQ9NRL2 1556 aaPredicted RBP8.91□□□□□ -0.98
ARHGEF6-203ENST00000370622 MROH2BQ7Z745 1585 aa8.89□□□□□ -0.99
ARHGEF6-203ENST00000370622 SMARCA4P51532 1647 aa8.84□□□□□ -0.99
ARHGEF6-203ENST00000370622 WIZO95785 1651 aa8.81□□□□□ -1
ARHGEF6-203ENST00000370622 EIF4G1Q04637 1599 aaKnown RBP8.74□□□□□ -1.01
ARHGEF6-203ENST00000370622 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
ARHGEF6-203ENST00000370622 ATAD2BQ9ULI0 1458 aa8.72□□□□□ -1.01
ARHGEF6-203ENST00000370622 TOP2AP11388 1531 aaKnown RBP8.72□□□□□ -1.01
ARHGEF6-203ENST00000370622 BAZ1BQ9UIG0 1483 aaKnown RBP8.71□□□□□ -1.02
ARHGEF6-203ENST00000370622 CHIC1Q5VXU3 224 aa8.7□□□□□ -1.02
ARHGEF6-203ENST00000370622 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
ARHGEF6-203ENST00000370622 CCDC88BA6NC98 1476 aa8.65□□□□□ -1.02
ARHGEF6-203ENST00000370622 NCAPD3P42695 1498 aa8.64□□□□□ -1.03
ARHGEF6-203ENST00000370622 HMGXB3Q12766 1538 aa8.61□□□□□ -1.03
ARHGEF6-203ENST00000370622 CC2D2AQ9P2K1 1620 aa8.61□□□□□ -1.03
ARHGEF6-203ENST00000370622 TRIM41Q8WV44 630 aa8.61□□□□□ -1.03
ARHGEF6-203ENST00000370622 FAM9AQ8IZU1 332 aaPredicted RBP8.48□□□□□ -1.05
ARHGEF6-203ENST00000370622 ABCC8Q09428 1581 aa8.47□□□□□ -1.05
ARHGEF6-203ENST00000370622 CADPSQ9ULU8 1353 aa8.46□□□□□ -1.06
ARHGEF6-203ENST00000370622 WRNQ14191 1432 aaPredicted RBP eCLIP8.45□□□□□ -1.06
ARHGEF6-203ENST00000370622 CFTRP13569 1480 aa8.45□□□□□ -1.06
ARHGEF6-203ENST00000370622 DNAJC5BQ9UF47 199 aa8.44□□□□□ -1.06
ARHGEF6-203ENST00000370622 LOC105371045A0A1W2PR82 267 aa8.39□□□□□ -1.07
ARHGEF6-203ENST00000370622 EHMT2Q96KQ7 1210 aa8.39□□□□□ -1.07
ARHGEF6-203ENST00000370622 NESP48681 1621 aa8.37□□□□□ -1.07
ARHGEF6-203ENST00000370622 FANCD2Q9BXW9 1451 aa8.36□□□□□ -1.07
ARHGEF6-203ENST00000370622 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
ARHGEF6-203ENST00000370622 LAMC3Q9Y6N6 1575 aa8.35□□□□□ -1.07
ARHGEF6-203ENST00000370622 PDS5BQ9NTI5 1447 aa8.35□□□□□ -1.07
ARHGEF6-203ENST00000370622 PRDM2Q13029 1718 aa8.34□□□□□ -1.07
ARHGEF6-203ENST00000370622 EEA1Q15075 1411 aa8.33□□□□□ -1.08
ARHGEF6-203ENST00000370622 SOGA1O94964 1423 aa8.32□□□□□ -1.08
ARHGEF6-203ENST00000370622 CSRNP3Q8WYN3 585 aa8.32□□□□□ -1.08
ARHGEF6-203ENST00000370622 TOP2BQ02880 1626 aa8.32□□□□□ -1.08
ARHGEF6-203ENST00000370622 CEP164Q9UPV0 1460 aa8.32□□□□□ -1.08
ARHGEF6-203ENST00000370622 CUX1P39880 1505 aa8.31□□□□□ -1.08
ARHGEF6-203ENST00000370622 BIVM-ERCC5R4GMW8 1640 aa8.29□□□□□ -1.08
ARHGEF6-203ENST00000370622 RUSC2Q8N2Y8 1516 aa8.28□□□□□ -1.08
ARHGEF6-203ENST00000370622 UBTFP17480 764 aaKnown RBP8.27□□□□□ -1.08
ARHGEF6-203ENST00000370622 FGD5Q6ZNL6 1462 aa8.26□□□□□ -1.09
ARHGEF6-203ENST00000370622 KIF27Q86VH2 1401 aa8.26□□□□□ -1.09
ARHGEF6-203ENST00000370622 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
ARHGEF6-203ENST00000370622 DNMBPQ6XZF7 1577 aa8.25□□□□□ -1.09
ARHGEF6-203ENST00000370622 TOPBP1Q92547 1522 aa8.25□□□□□ -1.09
ARHGEF6-203ENST00000370622 CUX2O14529 1486 aa8.24□□□□□ -1.09
ARHGEF6-203ENST00000370622 KIF21AQ7Z4S6 1674 aa8.23□□□□□ -1.09
ARHGEF6-203ENST00000370622 URB2Q14146 1524 aaKnown RBP8.22□□□□□ -1.09
ARHGEF6-203ENST00000370622 POLA1P09884 1462 aaPredicted RBP8.21□□□□□ -1.09
ARHGEF6-203ENST00000370622 GOLGA3Q08378 1498 aa8.21□□□□□ -1.1
ARHGEF6-203ENST00000370622 MRC2Q9UBG0 1479 aa8.21□□□□□ -1.1
ARHGEF6-203ENST00000370622 RAD54L2Q9Y4B4 1467 aa8.2□□□□□ -1.1
ARHGEF6-203ENST00000370622 TNIKQ9UKE5 1360 aa8.18□□□□□ -1.1
ARHGEF6-203ENST00000370622 RANGAP1P46060 587 aaPredicted RBP8.17□□□□□ -1.1
ARHGEF6-203ENST00000370622 TDRD9Q8NDG6 1382 aaKnown RBP8.16□□□□□ -1.1
ARHGEF6-203ENST00000370622 ABCA10Q8WWZ4 1543 aa8.16□□□□□ -1.1
ARHGEF6-203ENST00000370622 KIF21BO75037 1637 aa8.16□□□□□ -1.1
ARHGEF6-203ENST00000370622 IGF1RP08069 1367 aa8.15□□□□□ -1.1
ARHGEF6-203ENST00000370622 RAPGEF2Q9Y4G8 1499 aa8.15□□□□□ -1.1
ARHGEF6-203ENST00000370622 CARMIL1Q5VZK9 1371 aa8.15□□□□□ -1.11
ARHGEF6-203ENST00000370622 CEP162Q5TB80 1403 aa8.13□□□□□ -1.11
ARHGEF6-203ENST00000370622 PRXQ9BXM0 1461 aa8.13□□□□□ -1.11
ARHGEF6-203ENST00000370622 GAPVD1Q14C86 1478 aa8.12□□□□□ -1.11
ARHGEF6-203ENST00000370622 WDR62O43379 1518 aa8.12□□□□□ -1.11
ARHGEF6-203ENST00000370622 ERICH3Q5RHP9 1530 aa8.11□□□□□ -1.11
ARHGEF6-203ENST00000370622 IFT140Q96RY7 1462 aa8.11□□□□□ -1.11
ARHGEF6-203ENST00000370622 CLIP1P30622 1438 aa8.1□□□□□ -1.11
ARHGEF6-203ENST00000370622 AQRO60306 1485 aaKnown RBP eCLIP8.09□□□□□ -1.12
ARHGEF6-203ENST00000370622 THOC2Q8NI27 1593 aaKnown RBP8.08□□□□□ -1.12
ARHGEF6-203ENST00000370622 TARBP1Q13395 1621 aaKnown RBP8.08□□□□□ -1.12
ARHGEF6-203ENST00000370622 WDR97A6NE52 1622 aa8.07□□□□□ -1.12
ARHGEF6-203ENST00000370622 APLP2Q06481 763 aa8.06□□□□□ -1.12
ARHGEF6-203ENST00000370622 ABCA5Q8WWZ7 1642 aa8.06□□□□□ -1.12
ARHGEF6-203ENST00000370622 GRIN2BQ13224 1484 aa8.06□□□□□ -1.12
ARHGEF6-203ENST00000370622 CUL7Q14999 1698 aa8.06□□□□□ -1.12
ARHGEF6-203ENST00000370622 ZNF608Q9ULD9 1512 aaPredicted RBP8.05□□□□□ -1.12
ARHGEF6-203ENST00000370622 FBLN2P98095 1184 aa8.04□□□□□ -1.12
ARHGEF6-203ENST00000370622 PPARGC1BQ86YN6 1023 aaKnown RBP8.04□□□□□ -1.12
ARHGEF6-203ENST00000370622 FHAD1B1AJZ9 1412 aa8.03□□□□□ -1.12
ARHGEF6-203ENST00000370622 CHMP7Q8WUX9 453 aaPredicted RBP8.02□□□□□ -1.12
ARHGEF6-203ENST00000370622 PCGF6Q9BYE7 350 aa8.02□□□□□ -1.13
ARHGEF6-203ENST00000370622 TTBK1Q5TCY1 1321 aaPredicted RBP8.02□□□□□ -1.13
ARHGEF6-203ENST00000370622 P3H3Q8IVL6 736 aa8.01□□□□□ -1.13
ARHGEF6-203ENST00000370622 PBRM1Q86U86 1689 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms