RNA–Protein interactions for RNA: ENST00000369098.3

C1orf54-201, Transcript of chromosome 1 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C1orf54, Length 418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54-201ENST00000369098 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
C1orf54-201ENST00000369098 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
C1orf54-201ENST00000369098 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
C1orf54-201ENST00000369098 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
C1orf54-201ENST00000369098 FOXD1Q16676 465 aa13.69□□□□□ -0.22
C1orf54-201ENST00000369098 MSH5O43196 834 aa13.01□□□□□ -0.33
C1orf54-201ENST00000369098 PLPPR3Q6T4P5 718 aa12.95□□□□□ -0.34
C1orf54-201ENST00000369098 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
C1orf54-201ENST00000369098 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
C1orf54-201ENST00000369098 PPP6R1Q9UPN7 881 aa12.62□□□□□ -0.39
C1orf54-201ENST00000369098 ADRA2BP18089 450 aa12.59□□□□□ -0.39
C1orf54-201ENST00000369098 NISCHQ9Y2I1 1504 aa11.8□□□□□ -0.52
C1orf54-201ENST00000369098 SCAF1Q9H7N4 1312 aaKnown RBP11.75□□□□□ -0.53
C1orf54-201ENST00000369098 DMRT2Q9Y5R5 561 aa11.67□□□□□ -0.54
C1orf54-201ENST00000369098 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
C1orf54-201ENST00000369098 PPP4R3CPQ6ZMV5 832 aa11.26□□□□□ -0.61
C1orf54-201ENST00000369098 HOXD11P31277 338 aaPredicted RBP11.2□□□□□ -0.62
C1orf54-201ENST00000369098 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
C1orf54-201ENST00000369098 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
C1orf54-201ENST00000369098 CNKSR2Q8WXI2 1034 aa11.15□□□□□ -0.62
C1orf54-201ENST00000369098 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
C1orf54-201ENST00000369098 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
C1orf54-201ENST00000369098 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
C1orf54-201ENST00000369098 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
C1orf54-201ENST00000369098 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
C1orf54-201ENST00000369098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.7
C1orf54-201ENST00000369098 ABCC9O60706 1549 aa10.63□□□□□ -0.71
C1orf54-201ENST00000369098 NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
C1orf54-201ENST00000369098 CCDC180Q9P1Z9 1646 aa10.57□□□□□ -0.72
C1orf54-201ENST00000369098 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
C1orf54-201ENST00000369098 CAPN15O75808 1086 aa10.28□□□□□ -0.76
C1orf54-201ENST00000369098 APLP2Q06481 763 aa10.28□□□□□ -0.76
C1orf54-201ENST00000369098 DSG3P32926 999 aa10.25□□□□□ -0.77
C1orf54-201ENST00000369098 KCNA4P22459 653 aa10.22□□□□□ -0.77
C1orf54-201ENST00000369098 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
C1orf54-201ENST00000369098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
C1orf54-201ENST00000369098 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
C1orf54-201ENST00000369098 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
C1orf54-201ENST00000369098 ZNF219Q9P2Y4 722 aaPredicted RBP10.14□□□□□ -0.79
C1orf54-201ENST00000369098 RB1CC1Q8TDY2 1594 aa10.1□□□□□ -0.79
C1orf54-201ENST00000369098 SAMD1Q6SPF0 538 aaPredicted RBP10.09□□□□□ -0.79
C1orf54-201ENST00000369098 DCAF8L2P0C7V8 631 aa10.07□□□□□ -0.8
C1orf54-201ENST00000369098 TRHP20396 242 aaPredicted RBP10.05□□□□□ -0.8
C1orf54-201ENST00000369098 POTEHQ6S545 545 aa10.05□□□□□ -0.8
C1orf54-201ENST00000369098 NACADO15069 1562 aa10.01□□□□□ -0.81
C1orf54-201ENST00000369098 ABCB7O75027 752 aa9.95□□□□□ -0.82
C1orf54-201ENST00000369098 PABPN1Q86U42 306 aaKnown RBP eCLIP9.91□□□□□ -0.82
C1orf54-201ENST00000369098 RBM42Q9BTD8 480 aaKnown RBP9.91□□□□□ -0.82
C1orf54-201ENST00000369098 MYCNP04198 464 aaPredicted RBP9.89□□□□□ -0.83
C1orf54-201ENST00000369098 MYO15BQ96JP2 1530 aa9.84□□□□□ -0.83
C1orf54-201ENST00000369098 ZCCHC6Q5VYS8 1495 aaKnown RBP9.79□□□□□ -0.84
C1orf54-201ENST00000369098 POLA2Q14181 598 aa9.77□□□□□ -0.85
C1orf54-201ENST00000369098 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
C1orf54-201ENST00000369098 BICRAQ9NZM4 1560 aa9.74□□□□□ -0.85
C1orf54-201ENST00000369098 DCAF1Q9Y4B6 1507 aa9.72□□□□□ -0.85
C1orf54-201ENST00000369098 SLC4A1APQ9BWU0 796 aaKnown RBP9.7□□□□□ -0.86
C1orf54-201ENST00000369098 ZBTB12Q9Y330 459 aaPredicted RBP9.7□□□□□ -0.86
C1orf54-201ENST00000369098 SCRIBQ14160 1630 aa9.69□□□□□ -0.86
C1orf54-201ENST00000369098 FOXD4L1Q9NU39 408 aa9.69□□□□□ -0.86
C1orf54-201ENST00000369098 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
C1orf54-201ENST00000369098 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.86
C1orf54-201ENST00000369098 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
C1orf54-201ENST00000369098 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
C1orf54-201ENST00000369098 CC2D2AQ9P2K1 1620 aa9.56□□□□□ -0.88
C1orf54-201ENST00000369098 EIF4G1Q04637 1599 aaKnown RBP9.54□□□□□ -0.88
C1orf54-201ENST00000369098 ATF5Q9Y2D1 282 aaPredicted RBP9.51□□□□□ -0.89
C1orf54-201ENST00000369098 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
C1orf54-201ENST00000369098 REM2Q8IYK8 340 aaPredicted RBP9.45□□□□□ -0.9
C1orf54-201ENST00000369098 OSCARQ8IYS5 282 aa9.42□□□□□ -0.9
C1orf54-201ENST00000369098 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
C1orf54-201ENST00000369098 ZBTB22O15209 634 aa9.35□□□□□ -0.91
C1orf54-201ENST00000369098 FBLN2P98095 1184 aa9.35□□□□□ -0.91
C1orf54-201ENST00000369098 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
C1orf54-201ENST00000369098 SPDYE2BA6NHP3 402 aa9.33□□□□□ -0.92
C1orf54-201ENST00000369098 SPDYE6P0CI01 402 aa9.33□□□□□ -0.92
C1orf54-201ENST00000369098 SPDYE2Q495Y8 402 aa9.33□□□□□ -0.92
C1orf54-201ENST00000369098 PITPNM1O00562 1244 aa9.32□□□□□ -0.92
C1orf54-201ENST00000369098 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
C1orf54-201ENST00000369098 HAX1O00165 279 aa9.26□□□□□ -0.93
C1orf54-201ENST00000369098 NCAPD3P42695 1498 aa9.23□□□□□ -0.93
C1orf54-201ENST00000369098 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
C1orf54-201ENST00000369098 ATAD2BQ9ULI0 1458 aa9.22□□□□□ -0.93
C1orf54-201ENST00000369098 SMARCA2P51531 1590 aa9.21□□□□□ -0.93
C1orf54-201ENST00000369098 SMARCA4P51532 1647 aa9.2□□□□□ -0.94
C1orf54-201ENST00000369098 SPDYE1Q8NFV5 336 aaPredicted RBP9.2□□□□□ -0.94
C1orf54-201ENST00000369098 HMGXB3Q12766 1538 aa9.18□□□□□ -0.94
C1orf54-201ENST00000369098 BAZ1AQ9NRL2 1556 aaPredicted RBP9.18□□□□□ -0.94
C1orf54-201ENST00000369098 BAZ1BQ9UIG0 1483 aaKnown RBP9.17□□□□□ -0.94
C1orf54-201ENST00000369098 ZNF692Q9BU19 519 aaPredicted RBP9.15□□□□□ -0.94
C1orf54-201ENST00000369098 CUX2O14529 1486 aa9.15□□□□□ -0.95
C1orf54-201ENST00000369098 SSUH2Q9Y2M2 353 aa9.13□□□□□ -0.95
C1orf54-201ENST00000369098 DNAJC5Q9H3Z4 198 aa9.12□□□□□ -0.95
C1orf54-201ENST00000369098 CLEC11AQ9Y240 323 aa9.11□□□□□ -0.95
C1orf54-201ENST00000369098 NESP48681 1621 aa9.1□□□□□ -0.95
C1orf54-201ENST00000369098 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
C1orf54-201ENST00000369098 MKRN4PQ13434 485 aaPredicted RBP9.1□□□□□ -0.95
C1orf54-201ENST00000369098 MROH2BQ7Z745 1585 aa9.08□□□□□ -0.96
C1orf54-201ENST00000369098 PEG3Q9GZU2 1588 aa9.08□□□□□ -0.96
C1orf54-201ENST00000369098 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
C1orf54-201ENST00000369098 PDS5BQ9NTI5 1447 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms