RNA–Protein interactions for RNA: ENST00000368777.1

LCE4A-202, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LCE4A, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-202ENST00000368777 NISCHQ9Y2I1 1504 aa45.55■■■■■ 4.88
LCE4A-202ENST00000368777 CCDC180Q9P1Z9 1646 aa40.58■■■■■ 4.09
LCE4A-202ENST00000368777 ABCC9O60706 1549 aa40.04■■■■■ 4
LCE4A-202ENST00000368777 RB1CC1Q8TDY2 1594 aa38.34■■■■□ 3.73
LCE4A-202ENST00000368777 DCAF8L2P0C7V8 631 aa38.29■■■■□ 3.72
LCE4A-202ENST00000368777 NACADO15069 1562 aa38.21■■■■□ 3.71
LCE4A-202ENST00000368777 ZCCHC6Q5VYS8 1495 aaKnown RBP37.87■■■■□ 3.65
LCE4A-202ENST00000368777 MYO15BQ96JP2 1530 aa37.84■■■■□ 3.65
LCE4A-202ENST00000368777 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
LCE4A-202ENST00000368777 UNC13AQ9UPW8 1703 aa37.56■■■■□ 3.6
LCE4A-202ENST00000368777 PABPN1Q86U42 306 aaKnown RBP eCLIP37.41■■■■□ 3.58
LCE4A-202ENST00000368777 BICRAQ9NZM4 1560 aa37.22■■■■□ 3.55
LCE4A-202ENST00000368777 SCRIBQ14160 1630 aa37.09■■■■□ 3.53
LCE4A-202ENST00000368777 DNAJC5BQ9UF47 199 aa37.01■■■■□ 3.52
LCE4A-202ENST00000368777 SHROOM4Q9ULL8 1493 aa36.67■■■■□ 3.46
LCE4A-202ENST00000368777 EIF4G1Q04637 1599 aaKnown RBP36.24■■■■□ 3.39
LCE4A-202ENST00000368777 CC2D2AQ9P2K1 1620 aa36.19■■■■□ 3.38
LCE4A-202ENST00000368777 CECR2Q9BXF3 1484 aa35.97■■■■□ 3.35
LCE4A-202ENST00000368777 SMARCA4P51532 1647 aa35.41■■■■□ 3.26
LCE4A-202ENST00000368777 BAZ1AQ9NRL2 1556 aaPredicted RBP35.3■■■■□ 3.24
LCE4A-202ENST00000368777 ATAD2BQ9ULI0 1458 aa35.27■■■■□ 3.24
LCE4A-202ENST00000368777 NCAPD3P42695 1498 aa35.26■■■■□ 3.23
LCE4A-202ENST00000368777 SMARCA2P51531 1590 aa35.19■■■■□ 3.22
LCE4A-202ENST00000368777 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
LCE4A-202ENST00000368777 HMGXB3Q12766 1538 aa35.05■■■■□ 3.2
LCE4A-202ENST00000368777 PEG3Q9GZU2 1588 aa35.01■■■■□ 3.2
LCE4A-202ENST00000368777 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
LCE4A-202ENST00000368777 WIZO95785 1651 aa34.79■■■■□ 3.16
LCE4A-202ENST00000368777 RSF1Q96T23 1441 aaPredicted RBP34.62■■■■□ 3.13
LCE4A-202ENST00000368777 NESP48681 1621 aa34.59■■■■□ 3.13
LCE4A-202ENST00000368777 ERCC6Q03468 1493 aa34.51■■■■□ 3.11
LCE4A-202ENST00000368777 LAMC3Q9Y6N6 1575 aa34.38■■■■□ 3.09
LCE4A-202ENST00000368777 TOP2AP11388 1531 aaKnown RBP34.32■■■■□ 3.08
LCE4A-202ENST00000368777 CADPSQ9ULU8 1353 aa34.23■■■■□ 3.07
LCE4A-202ENST00000368777 CUX2O14529 1486 aa34.17■■■■□ 3.06
LCE4A-202ENST00000368777 KIF21AQ7Z4S6 1674 aa34.17■■■■□ 3.06
LCE4A-202ENST00000368777 PDS5BQ9NTI5 1447 aa34.16■■■■□ 3.06
LCE4A-202ENST00000368777 THOC2Q8NI27 1593 aaKnown RBP34.06■■■■□ 3.04
LCE4A-202ENST00000368777 CFTRP13569 1480 aa33.97■■■■□ 3.03
LCE4A-202ENST00000368777 CCDC88BA6NC98 1476 aa33.95■■■■□ 3.03
LCE4A-202ENST00000368777 FANCD2Q9BXW9 1451 aa33.87■■■■□ 3.01
LCE4A-202ENST00000368777 MRC2Q9UBG0 1479 aa33.83■■■■□ 3.01
LCE4A-202ENST00000368777 CEP164Q9UPV0 1460 aa33.83■■■■□ 3.01
LCE4A-202ENST00000368777 PRDM2Q13029 1718 aa33.74■■■□□ 2.99
LCE4A-202ENST00000368777 WDR62O43379 1518 aa33.73■■■□□ 2.99
LCE4A-202ENST00000368777 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
LCE4A-202ENST00000368777 URB2Q14146 1524 aaKnown RBP33.56■■■□□ 2.96
LCE4A-202ENST00000368777 DNAJC5Q9H3Z4 198 aa33.48■■■□□ 2.95
LCE4A-202ENST00000368777 TOPBP1Q92547 1522 aa33.3■■■□□ 2.92
LCE4A-202ENST00000368777 ABCC8Q09428 1581 aa33.23■■■□□ 2.91
LCE4A-202ENST00000368777 DNMBPQ6XZF7 1577 aa33.22■■■□□ 2.91
LCE4A-202ENST00000368777 IFT140Q96RY7 1462 aa33.12■■■□□ 2.89
LCE4A-202ENST00000368777 ZNF608Q9ULD9 1512 aaPredicted RBP33.06■■■□□ 2.88
LCE4A-202ENST00000368777 POLA1P09884 1462 aaPredicted RBP32.99■■■□□ 2.87
LCE4A-202ENST00000368777 CUX1P39880 1505 aa32.97■■■□□ 2.87
LCE4A-202ENST00000368777 TARBP1Q13395 1621 aaKnown RBP32.96■■■□□ 2.87
LCE4A-202ENST00000368777 RAD54L2Q9Y4B4 1467 aa32.9■■■□□ 2.86
LCE4A-202ENST00000368777 EIF4G3O43432 1585 aaKnown RBP32.9■■■□□ 2.86
LCE4A-202ENST00000368777 FGD5Q6ZNL6 1462 aa32.89■■■□□ 2.86
LCE4A-202ENST00000368777 SOGA1O94964 1423 aa32.87■■■□□ 2.85
LCE4A-202ENST00000368777 AQRO60306 1485 aaKnown RBP eCLIP32.84■■■□□ 2.85
LCE4A-202ENST00000368777 OSCARQ8IYS5 282 aa32.77■■■□□ 2.84
LCE4A-202ENST00000368777 TDRD9Q8NDG6 1382 aaKnown RBP32.74■■■□□ 2.83
LCE4A-202ENST00000368777 WRNQ14191 1432 aaPredicted RBP eCLIP32.64■■■□□ 2.82
LCE4A-202ENST00000368777 WDR97A6NE52 1622 aa32.63■■■□□ 2.81
LCE4A-202ENST00000368777 SYNJ1O43426 1573 aa32.62■■■□□ 2.81
LCE4A-202ENST00000368777 TOP2BQ02880 1626 aa32.6■■■□□ 2.81
LCE4A-202ENST00000368777 BIVM-ERCC5R4GMW8 1640 aa32.6■■■□□ 2.81
LCE4A-202ENST00000368777 CHD1O14646 1710 aa32.57■■■□□ 2.81
LCE4A-202ENST00000368777 FBLN2P98095 1184 aa32.53■■■□□ 2.8
LCE4A-202ENST00000368777 ABCA10Q8WWZ4 1543 aa32.52■■■□□ 2.8
LCE4A-202ENST00000368777 SNAPC4Q5SXM2 1469 aa32.51■■■□□ 2.79
LCE4A-202ENST00000368777 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
LCE4A-202ENST00000368777 GAPVD1Q14C86 1478 aa32.48■■■□□ 2.79
LCE4A-202ENST00000368777 PBRM1Q86U86 1689 aa32.46■■■□□ 2.79
LCE4A-202ENST00000368777 ABCA5Q8WWZ7 1642 aa32.44■■■□□ 2.78
LCE4A-202ENST00000368777 MAGI1Q96QZ7 1491 aaPredicted RBP32.42■■■□□ 2.78
LCE4A-202ENST00000368777 CHMP7Q8WUX9 453 aaPredicted RBP32.36■■■□□ 2.77
LCE4A-202ENST00000368777 TRIM41Q8WV44 630 aa32.35■■■□□ 2.77
LCE4A-202ENST00000368777 SYNJ2O15056 1496 aa32.31■■■□□ 2.76
LCE4A-202ENST00000368777 RIMBP3CA6NJZ7 1639 aa32.29■■■□□ 2.76
LCE4A-202ENST00000368777 RIMBP3BA6NNM3 1639 aa32.29■■■□□ 2.76
LCE4A-202ENST00000368777 RIMBP3Q9UFD9 1639 aa32.29■■■□□ 2.76
LCE4A-202ENST00000368777 ARHGEF11O15085 1522 aa32.23■■■□□ 2.75
LCE4A-202ENST00000368777 CLASP1Q7Z460 1538 aa32.15■■■□□ 2.74
LCE4A-202ENST00000368777 ADAMTS12P58397 1594 aa32.15■■■□□ 2.74
LCE4A-202ENST00000368777 ERICH3Q5RHP9 1530 aa32.13■■■□□ 2.73
LCE4A-202ENST00000368777 GRIN2AQ12879 1464 aa32.08■■■□□ 2.73
LCE4A-202ENST00000368777 FHAD1B1AJZ9 1412 aa32.07■■■□□ 2.72
LCE4A-202ENST00000368777 CYB5RLQ6IPT4 315 aa32■■■□□ 2.71
LCE4A-202ENST00000368777 KIF27Q86VH2 1401 aa31.97■■■□□ 2.71
LCE4A-202ENST00000368777 CEP170Q5SW79 1584 aa31.96■■■□□ 2.71
LCE4A-202ENST00000368777 ARAP1Q96P48 1450 aa31.96■■■□□ 2.71
LCE4A-202ENST00000368777 NUP160Q12769 1436 aa31.92■■■□□ 2.7
LCE4A-202ENST00000368777 IGF1RP08069 1367 aa31.89■■■□□ 2.7
LCE4A-202ENST00000368777 CUL7Q14999 1698 aa31.8■■■□□ 2.68
LCE4A-202ENST00000368777 ERCC6L2Q5T890 1561 aa31.76■■■□□ 2.67
LCE4A-202ENST00000368777 SHROOM2Q13796 1616 aa31.73■■■□□ 2.67
LCE4A-202ENST00000368777 CARMIL1Q5VZK9 1371 aa31.7■■■□□ 2.67
LCE4A-202ENST00000368777 RUSC2Q8N2Y8 1516 aa31.7■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms