RNA–Protein interactions for RNA: ENST00000368232.8

GPATCH4-201, Transcript of G-patch domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPATCH4, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-201ENST00000368232 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
GPATCH4-201ENST00000368232 CCDC180Q9P1Z9 1646 aa20.37■□□□□ 0.85
GPATCH4-201ENST00000368232 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
GPATCH4-201ENST00000368232 ABCC9O60706 1549 aa19.41■□□□□ 0.7
GPATCH4-201ENST00000368232 DCAF1Q9Y4B6 1507 aa19.28■□□□□ 0.68
GPATCH4-201ENST00000368232 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
GPATCH4-201ENST00000368232 SHROOM4Q9ULL8 1493 aa19.12■□□□□ 0.65
GPATCH4-201ENST00000368232 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
GPATCH4-201ENST00000368232 NACADO15069 1562 aa18.91■□□□□ 0.62
GPATCH4-201ENST00000368232 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
GPATCH4-201ENST00000368232 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
GPATCH4-201ENST00000368232 UNC13AQ9UPW8 1703 aa18.51■□□□□ 0.55
GPATCH4-201ENST00000368232 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
GPATCH4-201ENST00000368232 PABPN1Q86U42 306 aaKnown RBP eCLIP18.24■□□□□ 0.51
GPATCH4-201ENST00000368232 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
GPATCH4-201ENST00000368232 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
GPATCH4-201ENST00000368232 RSF1Q96T23 1441 aaPredicted RBP18.13■□□□□ 0.49
GPATCH4-201ENST00000368232 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
GPATCH4-201ENST00000368232 BAZ1AQ9NRL2 1556 aaPredicted RBP18.02■□□□□ 0.48
GPATCH4-201ENST00000368232 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
GPATCH4-201ENST00000368232 WIZO95785 1651 aa17.97■□□□□ 0.47
GPATCH4-201ENST00000368232 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
GPATCH4-201ENST00000368232 PEG3Q9GZU2 1588 aa17.72■□□□□ 0.43
GPATCH4-201ENST00000368232 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
GPATCH4-201ENST00000368232 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
GPATCH4-201ENST00000368232 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
GPATCH4-201ENST00000368232 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
GPATCH4-201ENST00000368232 ATAD2BQ9ULI0 1458 aa17.61■□□□□ 0.41
GPATCH4-201ENST00000368232 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
GPATCH4-201ENST00000368232 CCDC88BA6NC98 1476 aa17.54■□□□□ 0.4
GPATCH4-201ENST00000368232 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
GPATCH4-201ENST00000368232 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
GPATCH4-201ENST00000368232 NCAPD3P42695 1498 aa17.43■□□□□ 0.38
GPATCH4-201ENST00000368232 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
GPATCH4-201ENST00000368232 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
GPATCH4-201ENST00000368232 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
GPATCH4-201ENST00000368232 CFTRP13569 1480 aa17.08■□□□□ 0.32
GPATCH4-201ENST00000368232 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
GPATCH4-201ENST00000368232 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
GPATCH4-201ENST00000368232 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
GPATCH4-201ENST00000368232 LOC105371045A0A1W2PR82 267 aa17■□□□□ 0.31
GPATCH4-201ENST00000368232 CADPSQ9ULU8 1353 aa16.98■□□□□ 0.31
GPATCH4-201ENST00000368232 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
GPATCH4-201ENST00000368232 BIVM-ERCC5R4GMW8 1640 aa16.95■□□□□ 0.3
GPATCH4-201ENST00000368232 SOGA1O94964 1423 aa16.89■□□□□ 0.29
GPATCH4-201ENST00000368232 CUX1P39880 1505 aa16.88■□□□□ 0.29
GPATCH4-201ENST00000368232 NESP48681 1621 aa16.88■□□□□ 0.29
GPATCH4-201ENST00000368232 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
GPATCH4-201ENST00000368232 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
GPATCH4-201ENST00000368232 EEA1Q15075 1411 aa16.83■□□□□ 0.28
GPATCH4-201ENST00000368232 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
GPATCH4-201ENST00000368232 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
GPATCH4-201ENST00000368232 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
GPATCH4-201ENST00000368232 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
GPATCH4-201ENST00000368232 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
GPATCH4-201ENST00000368232 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
GPATCH4-201ENST00000368232 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
GPATCH4-201ENST00000368232 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
GPATCH4-201ENST00000368232 FGD5Q6ZNL6 1462 aa16.68■□□□□ 0.26
GPATCH4-201ENST00000368232 KIF21BO75037 1637 aa16.67■□□□□ 0.26
GPATCH4-201ENST00000368232 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
GPATCH4-201ENST00000368232 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
GPATCH4-201ENST00000368232 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
GPATCH4-201ENST00000368232 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
GPATCH4-201ENST00000368232 POLA1P09884 1462 aaPredicted RBP16.58■□□□□ 0.25
GPATCH4-201ENST00000368232 CUX2O14529 1486 aa16.57■□□□□ 0.24
GPATCH4-201ENST00000368232 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
GPATCH4-201ENST00000368232 UBTFP17480 764 aaKnown RBP16.55■□□□□ 0.24
GPATCH4-201ENST00000368232 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
GPATCH4-201ENST00000368232 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
GPATCH4-201ENST00000368232 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
GPATCH4-201ENST00000368232 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
GPATCH4-201ENST00000368232 PRXQ9BXM0 1461 aa16.52■□□□□ 0.24
GPATCH4-201ENST00000368232 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.24
GPATCH4-201ENST00000368232 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.23
GPATCH4-201ENST00000368232 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
GPATCH4-201ENST00000368232 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
GPATCH4-201ENST00000368232 WDR62O43379 1518 aa16.46■□□□□ 0.23
GPATCH4-201ENST00000368232 IGF1RP08069 1367 aa16.45■□□□□ 0.22
GPATCH4-201ENST00000368232 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
GPATCH4-201ENST00000368232 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
GPATCH4-201ENST00000368232 CUL7Q14999 1698 aa16.38■□□□□ 0.21
GPATCH4-201ENST00000368232 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
GPATCH4-201ENST00000368232 CLIP1P30622 1438 aa16.36■□□□□ 0.21
GPATCH4-201ENST00000368232 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
GPATCH4-201ENST00000368232 GAPVD1Q14C86 1478 aa16.34■□□□□ 0.21
GPATCH4-201ENST00000368232 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
GPATCH4-201ENST00000368232 RANGAP1P46060 587 aaPredicted RBP16.29■□□□□ 0.2
GPATCH4-201ENST00000368232 PCGF6Q9BYE7 350 aa16.29■□□□□ 0.2
GPATCH4-201ENST00000368232 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
GPATCH4-201ENST00000368232 CTTNBP2Q8WZ74 1663 aa16.27■□□□□ 0.2
GPATCH4-201ENST00000368232 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.192e-7■■■■□ 24.2
GPATCH4-201ENST00000368232 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
GPATCH4-201ENST00000368232 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
GPATCH4-201ENST00000368232 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
GPATCH4-201ENST00000368232 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
GPATCH4-201ENST00000368232 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.19
GPATCH4-201ENST00000368232 ARAP1Q96P48 1450 aa16.21■□□□□ 0.19
GPATCH4-201ENST00000368232 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
GPATCH4-201ENST00000368232 ARHGAP35Q9NRY4 1499 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms