RNA–Protein interactions for RNA: ENST00000368033.7

CD244-202, Transcript of CD244 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD244, Length 1,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD244-202ENST00000368033 NISCHQ9Y2I1 1504 aa41.92■■■■■ 4.3
CD244-202ENST00000368033 CCDC180Q9P1Z9 1646 aa37.57■■■■□ 3.61
CD244-202ENST00000368033 ABCC9O60706 1549 aa37.51■■■■□ 3.6
CD244-202ENST00000368033 RB1CC1Q8TDY2 1594 aa35.72■■■■□ 3.31
CD244-202ENST00000368033 NACADO15069 1562 aa35.5■■■■□ 3.27
CD244-202ENST00000368033 DCAF8L2P0C7V8 631 aa35.26■■■■□ 3.24
CD244-202ENST00000368033 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
CD244-202ENST00000368033 MYO15BQ96JP2 1530 aa35.05■■■■□ 3.2
CD244-202ENST00000368033 PABPN1Q86U42 306 aaKnown RBP eCLIP34.92■■■■□ 3.18
CD244-202ENST00000368033 UNC13AQ9UPW8 1703 aa34.91■■■■□ 3.18
CD244-202ENST00000368033 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
CD244-202ENST00000368033 BICRAQ9NZM4 1560 aa34.73■■■■□ 3.15
CD244-202ENST00000368033 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
CD244-202ENST00000368033 SCRIBQ14160 1630 aa34.25■■■■□ 3.07
CD244-202ENST00000368033 SHROOM4Q9ULL8 1493 aa34.25■■■■□ 3.07
CD244-202ENST00000368033 CC2D2AQ9P2K1 1620 aa33.89■■■■□ 3.02
CD244-202ENST00000368033 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
CD244-202ENST00000368033 CECR2Q9BXF3 1484 aa33.78■■■■□ 3
CD244-202ENST00000368033 NCAPD3P42695 1498 aa32.78■■■□□ 2.84
CD244-202ENST00000368033 ATAD2BQ9ULI0 1458 aa32.7■■■□□ 2.83
CD244-202ENST00000368033 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
CD244-202ENST00000368033 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
CD244-202ENST00000368033 HMGXB3Q12766 1538 aa32.56■■■□□ 2.8
CD244-202ENST00000368033 BAZ1AQ9NRL2 1556 aaPredicted RBP32.53■■■□□ 2.8
CD244-202ENST00000368033 PEG3Q9GZU2 1588 aa32.38■■■□□ 2.77
CD244-202ENST00000368033 BAZ1BQ9UIG0 1483 aaKnown RBP32.37■■■□□ 2.77
CD244-202ENST00000368033 ERCC6Q03468 1493 aa32.37■■■□□ 2.77
CD244-202ENST00000368033 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
CD244-202ENST00000368033 CUX2O14529 1486 aa32.3■■■□□ 2.76
CD244-202ENST00000368033 NESP48681 1621 aa32.27■■■□□ 2.76
CD244-202ENST00000368033 DNAJC5Q9H3Z4 198 aa32.17■■■□□ 2.74
CD244-202ENST00000368033 LAMC3Q9Y6N6 1575 aa32.03■■■□□ 2.72
CD244-202ENST00000368033 THOC2Q8NI27 1593 aaKnown RBP31.93■■■□□ 2.7
CD244-202ENST00000368033 WIZO95785 1651 aa31.9■■■□□ 2.7
CD244-202ENST00000368033 PDS5BQ9NTI5 1447 aa31.83■■■□□ 2.69
CD244-202ENST00000368033 KIF21AQ7Z4S6 1674 aa31.82■■■□□ 2.68
CD244-202ENST00000368033 CADPSQ9ULU8 1353 aa31.78■■■□□ 2.68
CD244-202ENST00000368033 RSF1Q96T23 1441 aaPredicted RBP31.66■■■□□ 2.66
CD244-202ENST00000368033 MRC2Q9UBG0 1479 aa31.57■■■□□ 2.64
CD244-202ENST00000368033 TOP2AP11388 1531 aaKnown RBP31.52■■■□□ 2.64
CD244-202ENST00000368033 WDR62O43379 1518 aa31.51■■■□□ 2.63
CD244-202ENST00000368033 CEP164Q9UPV0 1460 aa31.46■■■□□ 2.63
CD244-202ENST00000368033 CFTRP13569 1480 aa31.45■■■□□ 2.63
CD244-202ENST00000368033 FANCD2Q9BXW9 1451 aa31.44■■■□□ 2.62
CD244-202ENST00000368033 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
CD244-202ENST00000368033 CCDC88BA6NC98 1476 aa31.15■■■□□ 2.58
CD244-202ENST00000368033 PRDM2Q13029 1718 aa31.09■■■□□ 2.57
CD244-202ENST00000368033 TOPBP1Q92547 1522 aa30.85■■■□□ 2.53
CD244-202ENST00000368033 IFT140Q96RY7 1462 aa30.82■■■□□ 2.52
CD244-202ENST00000368033 ZNF608Q9ULD9 1512 aaPredicted RBP30.79■■■□□ 2.52
CD244-202ENST00000368033 OSCARQ8IYS5 282 aa30.79■■■□□ 2.52
CD244-202ENST00000368033 TRIM41Q8WV44 630 aa30.79■■■□□ 2.52
CD244-202ENST00000368033 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
CD244-202ENST00000368033 DNMBPQ6XZF7 1577 aa30.74■■■□□ 2.51
CD244-202ENST00000368033 EIF4G3O43432 1585 aaKnown RBP30.63■■■□□ 2.49
CD244-202ENST00000368033 TARBP1Q13395 1621 aaKnown RBP30.58■■■□□ 2.49
CD244-202ENST00000368033 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
CD244-202ENST00000368033 AQRO60306 1485 aaKnown RBP eCLIP30.5■■■□□ 2.47
CD244-202ENST00000368033 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
CD244-202ENST00000368033 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
CD244-202ENST00000368033 RIMBP3Q9UFD9 1639 aa30.43■■■□□ 2.46
CD244-202ENST00000368033 RAD54L2Q9Y4B4 1467 aa30.43■■■□□ 2.46
CD244-202ENST00000368033 SOGA1O94964 1423 aa30.37■■■□□ 2.45
CD244-202ENST00000368033 FGD5Q6ZNL6 1462 aa30.36■■■□□ 2.45
CD244-202ENST00000368033 ARHGEF11O15085 1522 aa30.36■■■□□ 2.45
CD244-202ENST00000368033 CUX1P39880 1505 aa30.36■■■□□ 2.45
CD244-202ENST00000368033 CHD1O14646 1710 aa30.35■■■□□ 2.45
CD244-202ENST00000368033 TDRD9Q8NDG6 1382 aaKnown RBP30.32■■■□□ 2.44
CD244-202ENST00000368033 WDR97A6NE52 1622 aa30.25■■■□□ 2.43
CD244-202ENST00000368033 SUPT5HO00267 1087 aaKnown RBP30.25■■■□□ 2.43
CD244-202ENST00000368033 FBLN2P98095 1184 aa30.23■■■□□ 2.43
CD244-202ENST00000368033 SNAPC4Q5SXM2 1469 aa30.21■■■□□ 2.43
CD244-202ENST00000368033 GRIN2BQ13224 1484 aa30.12■■■□□ 2.41
CD244-202ENST00000368033 MAGI1Q96QZ7 1491 aaPredicted RBP30.12■■■□□ 2.41
CD244-202ENST00000368033 ARAP1Q96P48 1450 aa30.08■■■□□ 2.41
CD244-202ENST00000368033 CYB5RLQ6IPT4 315 aa30.07■■■□□ 2.4
CD244-202ENST00000368033 CLASP1Q7Z460 1538 aa30.05■■■□□ 2.4
CD244-202ENST00000368033 CHMP7Q8WUX9 453 aaPredicted RBP30.03■■■□□ 2.4
CD244-202ENST00000368033 ABCA10Q8WWZ4 1543 aa30.02■■■□□ 2.4
CD244-202ENST00000368033 SYNJ2O15056 1496 aa30.02■■■□□ 2.4
CD244-202ENST00000368033 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
CD244-202ENST00000368033 SYNJ1O43426 1573 aa30■■■□□ 2.39
CD244-202ENST00000368033 PBRM1Q86U86 1689 aa29.99■■■□□ 2.39
CD244-202ENST00000368033 ABCA5Q8WWZ7 1642 aa29.98■■■□□ 2.39
CD244-202ENST00000368033 WRNQ14191 1432 aaPredicted RBP eCLIP29.89■■■□□ 2.38
CD244-202ENST00000368033 TOP2BQ02880 1626 aa29.87■■■□□ 2.37
CD244-202ENST00000368033 BIVM-ERCC5R4GMW8 1640 aa29.87■■■□□ 2.37
CD244-202ENST00000368033 ADAMTS12P58397 1594 aa29.76■■■□□ 2.35
CD244-202ENST00000368033 GRIN2AQ12879 1464 aa29.75■■■□□ 2.35
CD244-202ENST00000368033 TRHP20396 242 aaPredicted RBP29.7■■■□□ 2.35
CD244-202ENST00000368033 NUP160Q12769 1436 aa29.65■■■□□ 2.34
CD244-202ENST00000368033 CEP170Q5SW79 1584 aa29.65■■■□□ 2.34
CD244-202ENST00000368033 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
CD244-202ENST00000368033 ERICH3Q5RHP9 1530 aa29.63■■■□□ 2.33
CD244-202ENST00000368033 ERCC6L2Q5T890 1561 aa29.59■■■□□ 2.33
CD244-202ENST00000368033 SHROOM2Q13796 1616 aa29.51■■■□□ 2.31
CD244-202ENST00000368033 RUSC2Q8N2Y8 1516 aa29.34■■■□□ 2.29
CD244-202ENST00000368033 PRG4Q92954 1404 aaPredicted RBP29.34■■■□□ 2.29
CD244-202ENST00000368033 JPH4Q96JJ6 628 aa29.29■■■□□ 2.28
CD244-202ENST00000368033 KIF27Q86VH2 1401 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms