RNA–Protein interactions for RNA: ENST00000367770.5

SCYL3-201, Transcript of SCY1 like pseudokinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCYL3, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-201ENST00000367770 NISCHQ9Y2I1 1504 aa13.95□□□□□ -0.18
SCYL3-201ENST00000367770 CCDC180Q9P1Z9 1646 aa12.58□□□□□ -0.4
SCYL3-201ENST00000367770 DCAF8L2P0C7V8 631 aa12.23□□□□□ -0.45
SCYL3-201ENST00000367770 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
SCYL3-201ENST00000367770 MYO15BQ96JP2 1530 aa11.9□□□□□ -0.5
SCYL3-201ENST00000367770 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.52
SCYL3-201ENST00000367770 ABCC9O60706 1549 aa11.79□□□□□ -0.52
SCYL3-201ENST00000367770 AEBP2Q6ZN18 517 aaPredicted RBP11.67□□□□□ -0.54
SCYL3-201ENST00000367770 NACADO15069 1562 aa11.67□□□□□ -0.54
SCYL3-201ENST00000367770 ZCCHC6Q5VYS8 1495 aaKnown RBP11.64□□□□□ -0.55
SCYL3-201ENST00000367770 DCAF1Q9Y4B6 1507 aa11.63□□□□□ -0.55
SCYL3-201ENST00000367770 RB1CC1Q8TDY2 1594 aa11.6□□□□□ -0.55
SCYL3-201ENST00000367770 SUPT5HO00267 1087 aaKnown RBP11.52□□□□□ -0.57
SCYL3-201ENST00000367770 PELP1Q8IZL8 1130 aaKnown RBP11.51□□□□□ -0.57
SCYL3-201ENST00000367770 SCRIBQ14160 1630 aa11.33□□□□□ -0.6
SCYL3-201ENST00000367770 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCYL3-201ENST00000367770 MYT1Q01538 1121 aa11.26□□□□□ -0.61
SCYL3-201ENST00000367770 UNC13AQ9UPW8 1703 aa11.24□□□□□ -0.61
SCYL3-201ENST00000367770 BICRAQ9NZM4 1560 aa11.09□□□□□ -0.63
SCYL3-201ENST00000367770 CECR2Q9BXF3 1484 aa11.01□□□□□ -0.65
SCYL3-201ENST00000367770 HRCP23327 699 aa10.99□□□□□ -0.65
SCYL3-201ENST00000367770 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
SCYL3-201ENST00000367770 MROH2BQ7Z745 1585 aa10.87□□□□□ -0.67
SCYL3-201ENST00000367770 WIZO95785 1651 aa10.78□□□□□ -0.68
SCYL3-201ENST00000367770 EIF4G1Q04637 1599 aaKnown RBP10.76□□□□□ -0.69
SCYL3-201ENST00000367770 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
SCYL3-201ENST00000367770 SMARCA2P51531 1590 aa10.76□□□□□ -0.69
SCYL3-201ENST00000367770 PEG3Q9GZU2 1588 aa10.75□□□□□ -0.69
SCYL3-201ENST00000367770 TTBK1Q5TCY1 1321 aaPredicted RBP10.75□□□□□ -0.69
SCYL3-201ENST00000367770 BAZ1AQ9NRL2 1556 aaPredicted RBP10.74□□□□□ -0.69
SCYL3-201ENST00000367770 FAM9AQ8IZU1 332 aaPredicted RBP10.71□□□□□ -0.69
SCYL3-201ENST00000367770 SCAF1Q9H7N4 1312 aaKnown RBP10.71□□□□□ -0.7
SCYL3-201ENST00000367770 HMGXB3Q12766 1538 aa10.71□□□□□ -0.7
SCYL3-201ENST00000367770 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.7
SCYL3-201ENST00000367770 CC2D2AQ9P2K1 1620 aa10.7□□□□□ -0.7
SCYL3-201ENST00000367770 SMARCA4P51532 1647 aa10.69□□□□□ -0.7
SCYL3-201ENST00000367770 TRIM41Q8WV44 630 aa10.68□□□□□ -0.7
SCYL3-201ENST00000367770 PHF23Q9BUL5 403 aaPredicted RBP10.64□□□□□ -0.71
SCYL3-201ENST00000367770 ATAD2BQ9ULI0 1458 aa10.6□□□□□ -0.71
SCYL3-201ENST00000367770 CUX2O14529 1486 aa10.59□□□□□ -0.71
SCYL3-201ENST00000367770 NCAPD3P42695 1498 aa10.59□□□□□ -0.71
SCYL3-201ENST00000367770 BAZ1BQ9UIG0 1483 aaKnown RBP10.59□□□□□ -0.71
SCYL3-201ENST00000367770 CCDC88BA6NC98 1476 aa10.58□□□□□ -0.72
SCYL3-201ENST00000367770 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
SCYL3-201ENST00000367770 DNAJC5BQ9UF47 199 aa10.56□□□□□ -0.72
SCYL3-201ENST00000367770 TOP2AP11388 1531 aaKnown RBP10.53□□□□□ -0.72
SCYL3-201ENST00000367770 PRKCSHP14314 528 aaPredicted RBP10.47□□□□□ -0.73
SCYL3-201ENST00000367770 LAMC3Q9Y6N6 1575 aa10.46□□□□□ -0.73
SCYL3-201ENST00000367770 PCGF6Q9BYE7 350 aa10.46□□□□□ -0.73
SCYL3-201ENST00000367770 PRDM2Q13029 1718 aa10.45□□□□□ -0.74
SCYL3-201ENST00000367770 ABCC8Q09428 1581 aa10.43□□□□□ -0.74
SCYL3-201ENST00000367770 BCL11AQ9H165 835 aa10.41□□□□□ -0.74
SCYL3-201ENST00000367770 RANGAP1P46060 587 aaPredicted RBP10.39□□□□□ -0.75
SCYL3-201ENST00000367770 WDR97A6NE52 1622 aa10.37□□□□□ -0.75
SCYL3-201ENST00000367770 UBTFP17480 764 aaKnown RBP10.31□□□□□ -0.76
SCYL3-201ENST00000367770 WRNQ14191 1432 aaPredicted RBP eCLIP10.31□□□□□ -0.76
SCYL3-201ENST00000367770 NESP48681 1621 aa10.31□□□□□ -0.76
SCYL3-201ENST00000367770 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
SCYL3-201ENST00000367770 CADPSQ9ULU8 1353 aa10.29□□□□□ -0.76
SCYL3-201ENST00000367770 SOGA1O94964 1423 aa10.28□□□□□ -0.76
SCYL3-201ENST00000367770 ACIN1Q9UKV3 1341 aaKnown RBP10.28□□□□□ -0.76
SCYL3-201ENST00000367770 RUSC2Q8N2Y8 1516 aa10.25□□□□□ -0.77
SCYL3-201ENST00000367770 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
SCYL3-201ENST00000367770 CENPBP07199 599 aaPredicted RBP10.24□□□□□ -0.77
SCYL3-201ENST00000367770 ERICH6Q7L0X2 663 aa10.24□□□□□ -0.77
SCYL3-201ENST00000367770 CFTRP13569 1480 aa10.23□□□□□ -0.77
SCYL3-201ENST00000367770 WDR62O43379 1518 aa10.22□□□□□ -0.77
SCYL3-201ENST00000367770 GTF3C3Q9Y5Q9 886 aa10.22□□□□□ -0.77
SCYL3-201ENST00000367770 NEUROD1Q13562 356 aa10.21□□□□□ -0.78
SCYL3-201ENST00000367770 SYNJ1O43426 1573 aa10.19□□□□□ -0.78
SCYL3-201ENST00000367770 FANCD2Q9BXW9 1451 aa10.18□□□□□ -0.78
SCYL3-201ENST00000367770 APLP2Q06481 763 aa10.17□□□□□ -0.78
SCYL3-201ENST00000367770 ZEB1P37275 1124 aaPredicted RBP10.14□□□□□ -0.79
SCYL3-201ENST00000367770 PDS5BQ9NTI5 1447 aa10.14□□□□□ -0.79
SCYL3-201ENST00000367770 CUX1P39880 1505 aa10.12□□□□□ -0.79
SCYL3-201ENST00000367770 ERCC6Q03468 1493 aa10.11□□□□□ -0.79
SCYL3-201ENST00000367770 CEP164Q9UPV0 1460 aa10.09□□□□□ -0.79
SCYL3-201ENST00000367770 RAD54L2Q9Y4B4 1467 aa10.09□□□□□ -0.79
SCYL3-201ENST00000367770 TDRD9Q8NDG6 1382 aaKnown RBP10.09□□□□□ -0.79
SCYL3-201ENST00000367770 MRC2Q9UBG0 1479 aa10.09□□□□□ -0.79
SCYL3-201ENST00000367770 FGD5Q6ZNL6 1462 aa10.07□□□□□ -0.8
SCYL3-201ENST00000367770 FBLN2P98095 1184 aa10.06□□□□□ -0.8
SCYL3-201ENST00000367770 KIF21AQ7Z4S6 1674 aa10.06□□□□□ -0.8
SCYL3-201ENST00000367770 P3H3Q8IVL6 736 aa10.06□□□□□ -0.8
SCYL3-201ENST00000367770 TOP2BQ02880 1626 aa10.06□□□□□ -0.8
SCYL3-201ENST00000367770 ATP1B4Q9UN42 357 aaPredicted RBP10.06□□□□□ -0.8
SCYL3-201ENST00000367770 KIF27Q86VH2 1401 aa10.05□□□□□ -0.8
SCYL3-201ENST00000367770 ANP32EQ9BTT0 268 aa10.03□□□□□ -0.8
SCYL3-201ENST00000367770 TOPBP1Q92547 1522 aa10.02□□□□□ -0.81
SCYL3-201ENST00000367770 RAPGEF2Q9Y4G8 1499 aa10.02□□□□□ -0.81
SCYL3-201ENST00000367770 URB2Q14146 1524 aaKnown RBP10.01□□□□□ -0.81
SCYL3-201ENST00000367770 EEA1Q15075 1411 aa10.01□□□□□ -0.81
SCYL3-201ENST00000367770 POLA1P09884 1462 aaPredicted RBP10□□□□□ -0.81
SCYL3-201ENST00000367770 IGF1RP08069 1367 aa9.98□□□□□ -0.81
SCYL3-201ENST00000367770 TRIM26Q12899 539 aaPredicted RBP9.98□□□□□ -0.81
SCYL3-201ENST00000367770 GOLGA3Q08378 1498 aa9.98□□□□□ -0.81
SCYL3-201ENST00000367770 CEP162Q5TB80 1403 aa9.98□□□□□ -0.81
SCYL3-201ENST00000367770 DNAJC5Q9H3Z4 198 aa9.98□□□□□ -0.81
SCYL3-201ENST00000367770 CARMIL1Q5VZK9 1371 aa9.98□□□□□ -0.81
SCYL3-201ENST00000367770 BIVM-ERCC5R4GMW8 1640 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms