RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 DCAF8L2P0C7V8 631 aa13.82□□□□□ -0.2
SHPRH-203ENST00000367505 NISCHQ9Y2I1 1504 aa13.76□□□□□ -0.21
SHPRH-203ENST00000367505 SUPT5HO00267 1087 aaKnown RBP13.45□□□□□ -0.26
SHPRH-203ENST00000367505 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.31
SHPRH-203ENST00000367505 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
SHPRH-203ENST00000367505 ZEB1P37275 1124 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-203ENST00000367505 APLP2Q06481 763 aa12.84□□□□□ -0.35
SHPRH-203ENST00000367505 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
SHPRH-203ENST00000367505 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
SHPRH-203ENST00000367505 CENPBP07199 599 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-203ENST00000367505 MYT1Q01538 1121 aa12.64□□□□□ -0.39
SHPRH-203ENST00000367505 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-203ENST00000367505 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
SHPRH-203ENST00000367505 CCER1Q8TC90 406 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-203ENST00000367505 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
SHPRH-203ENST00000367505 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
SHPRH-203ENST00000367505 TRIM26Q12899 539 aaPredicted RBP12.41□□□□□ -0.42
SHPRH-203ENST00000367505 HRCP23327 699 aa12.4□□□□□ -0.42
SHPRH-203ENST00000367505 NEFLP07196 543 aa12.34□□□□□ -0.43
SHPRH-203ENST00000367505 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
SHPRH-203ENST00000367505 RANGAP1P46060 587 aaPredicted RBP12.2□□□□□ -0.46
SHPRH-203ENST00000367505 CHIC1Q5VXU3 224 aa12.19□□□□□ -0.46
SHPRH-203ENST00000367505 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
SHPRH-203ENST00000367505 ATP1B4Q9UN42 357 aaPredicted RBP12.14□□□□□ -0.47
SHPRH-203ENST00000367505 PPARGC1BQ86YN6 1023 aaKnown RBP12.05□□□□□ -0.48
SHPRH-203ENST00000367505 LOC105371045A0A1W2PR82 267 aa12.05□□□□□ -0.48
SHPRH-203ENST00000367505 DIEXFQ68CQ4 756 aaKnown RBP11.95□□□□□ -0.5
SHPRH-203ENST00000367505 DAXXQ9UER7 740 aaPredicted RBP11.9□□□□□ -0.5
SHPRH-203ENST00000367505 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
SHPRH-203ENST00000367505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
SHPRH-203ENST00000367505 ITGAEP38570 1179 aa11.84□□□□□ -0.51
SHPRH-203ENST00000367505 RTL5Q5HYW3 569 aaPredicted RBP11.75□□□□□ -0.53
SHPRH-203ENST00000367505 GTF3C3Q9Y5Q9 886 aa11.74□□□□□ -0.53
SHPRH-203ENST00000367505 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
SHPRH-203ENST00000367505 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
SHPRH-203ENST00000367505 CLSPNQ9HAW4 1339 aa11.66□□□□□ -0.54
SHPRH-203ENST00000367505 ACIN1Q9UKV3 1341 aaKnown RBP11.66□□□□□ -0.54
SHPRH-203ENST00000367505 DCAF1Q9Y4B6 1507 aa11.64□□□□□ -0.55
SHPRH-203ENST00000367505 ANP32CO43423 234 aa11.63□□□□□ -0.55
SHPRH-203ENST00000367505 FAM50AQ14320 339 aaKnown RBP11.62□□□□□ -0.55
SHPRH-203ENST00000367505 CDK11AQ9UQ88 783 aaPredicted RBP11.61□□□□□ -0.55
SHPRH-203ENST00000367505 MYT1LQ9UL68 1186 aa11.56□□□□□ -0.56
SHPRH-203ENST00000367505 NEUROD1Q13562 356 aa11.54□□□□□ -0.56
SHPRH-203ENST00000367505 CNGB1Q14028 1251 aaPredicted RBP11.53□□□□□ -0.56
SHPRH-203ENST00000367505 TRIM52Q96A61 297 aa11.53□□□□□ -0.56
SHPRH-203ENST00000367505 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.56
SHPRH-203ENST00000367505 BCANQ96GW7 911 aa11.5□□□□□ -0.57
SHPRH-203ENST00000367505 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
SHPRH-203ENST00000367505 ABCC9O60706 1549 aa11.43□□□□□ -0.58
SHPRH-203ENST00000367505 ANP32AP39687 249 aaKnown RBP11.42□□□□□ -0.58
SHPRH-203ENST00000367505 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
SHPRH-203ENST00000367505 PABPN1Q86U42 306 aaKnown RBP eCLIP11.35□□□□□ -0.59
SHPRH-203ENST00000367505 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
SHPRH-203ENST00000367505 ZNF326Q5BKZ1 582 aaKnown RBP11.33□□□□□ -0.59
SHPRH-203ENST00000367505 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
SHPRH-203ENST00000367505 FKBP8Q14318 412 aa11.32□□□□□ -0.6
SHPRH-203ENST00000367505 CCDC180Q9P1Z9 1646 aa11.29□□□□□ -0.6
SHPRH-203ENST00000367505 CANXP27824 592 aaKnown RBP11.28□□□□□ -0.6
SHPRH-203ENST00000367505 SCAF1Q9H7N4 1312 aaKnown RBP11.26□□□□□ -0.61
SHPRH-203ENST00000367505 HNRNPUQ00839 825 aaKnown RBP eCLIP11.25□□□□□ -0.61
SHPRH-203ENST00000367505 NEFMP07197 916 aa11.24□□□□□ -0.61
SHPRH-203ENST00000367505 SCRIBQ14160 1630 aa11.23□□□□□ -0.61
SHPRH-203ENST00000367505 EEA1Q15075 1411 aa11.23□□□□□ -0.61
SHPRH-203ENST00000367505 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
SHPRH-203ENST00000367505 P3H3Q8IVL6 736 aa11.21□□□□□ -0.62
SHPRH-203ENST00000367505 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
SHPRH-203ENST00000367505 MIER1Q8N108 512 aa11.18□□□□□ -0.62
SHPRH-203ENST00000367505 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
SHPRH-203ENST00000367505 ANP32BQ92688 251 aaKnown RBP11.17□□□□□ -0.62
SHPRH-203ENST00000367505 CCDC136Q96JN2 1154 aa11.16□□□□□ -0.62
SHPRH-203ENST00000367505 CLIP1P30622 1438 aa11.16□□□□□ -0.62
SHPRH-203ENST00000367505 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.62
SHPRH-203ENST00000367505 FAM9BQ8IZU0 186 aa11.14□□□□□ -0.63
SHPRH-203ENST00000367505 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.14□□□□□ -0.63
SHPRH-203ENST00000367505 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
SHPRH-203ENST00000367505 GOLGA3Q08378 1498 aa11.12□□□□□ -0.63
SHPRH-203ENST00000367505 GLIPR1L2Q4G1C9 344 aa11.12□□□□□ -0.63
SHPRH-203ENST00000367505 FBLN2P98095 1184 aa11.11□□□□□ -0.63
SHPRH-203ENST00000367505 MRS2Q9HD23 443 aa11.1□□□□□ -0.63
SHPRH-203ENST00000367505 ZNF777Q9ULD5 760 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-203ENST00000367505 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
SHPRH-203ENST00000367505 EIF5BO60841 1220 aaKnown RBP11.08□□□□□ -0.64
SHPRH-203ENST00000367505 HSP90AA1P07900 732 aaKnown RBP11.08□□□□□ -0.64
SHPRH-203ENST00000367505 EIF4G2P78344 907 aaKnown RBP eCLIP11.07□□□□□ -0.64
SHPRH-203ENST00000367505 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
SHPRH-203ENST00000367505 MTUS2Q5JR59 1369 aa11.07□□□□□ -0.64
SHPRH-203ENST00000367505 TNIKQ9UKE5 1360 aa11.06□□□□□ -0.64
SHPRH-203ENST00000367505 ARID3CA6NKF2 412 aa11.04□□□□□ -0.64
SHPRH-203ENST00000367505 ANP32EQ9BTT0 268 aa11.03□□□□□ -0.64
SHPRH-203ENST00000367505 DDRGK1Q96HY6 314 aa11.03□□□□□ -0.64
SHPRH-203ENST00000367505 NBR1Q14596 966 aa11.02□□□□□ -0.64
SHPRH-203ENST00000367505 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.65
SHPRH-203ENST00000367505 CEP164Q9UPV0 1460 aa11.01□□□□□ -0.65
SHPRH-203ENST00000367505 TSPY4P0CV99 314 aa11□□□□□ -0.65
SHPRH-203ENST00000367505 TSPY10P0CW01 314 aa11□□□□□ -0.65
SHPRH-203ENST00000367505 CHIC2Q9UKJ5 165 aa10.99□□□□□ -0.65
SHPRH-203ENST00000367505 BCL11AQ9H165 835 aa10.97□□□□□ -0.65
SHPRH-203ENST00000367505 WRNQ14191 1432 aaPredicted RBP eCLIP10.97□□□□□ -0.65
SHPRH-203ENST00000367505 SLC24A1O60721 1099 aa10.97□□□□□ -0.65
SHPRH-203ENST00000367505 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms