RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
NUP43-202ENST00000367402 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
NUP43-202ENST00000367402 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
NUP43-202ENST00000367402 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
NUP43-202ENST00000367402 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
NUP43-202ENST00000367402 FOXD1Q16676 465 aa20.9■□□□□ 0.94
NUP43-202ENST00000367402 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
NUP43-202ENST00000367402 ABCC9O60706 1549 aa20.41■□□□□ 0.86
NUP43-202ENST00000367402 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
NUP43-202ENST00000367402 MSH5O43196 834 aa19.78■□□□□ 0.76
NUP43-202ENST00000367402 POTEDQ86YR6 584 aa19.66■□□□□ 0.74
NUP43-202ENST00000367402 PLPPR3Q6T4P5 718 aa19.65■□□□□ 0.74
NUP43-202ENST00000367402 ZCCHC6Q5VYS8 1495 aaKnown RBP19.65■□□□□ 0.74
NUP43-202ENST00000367402 NACADO15069 1562 aa19.61■□□□□ 0.73
NUP43-202ENST00000367402 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
NUP43-202ENST00000367402 PIAS4Q8N2W9 510 aaPredicted RBP19.54■□□□□ 0.72
NUP43-202ENST00000367402 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
NUP43-202ENST00000367402 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
NUP43-202ENST00000367402 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
NUP43-202ENST00000367402 ADRA2BP18089 450 aa19.26■□□□□ 0.67
NUP43-202ENST00000367402 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
NUP43-202ENST00000367402 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
NUP43-202ENST00000367402 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
NUP43-202ENST00000367402 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
NUP43-202ENST00000367402 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
NUP43-202ENST00000367402 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
NUP43-202ENST00000367402 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
NUP43-202ENST00000367402 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
NUP43-202ENST00000367402 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.54
NUP43-202ENST00000367402 BAZ1AQ9NRL2 1556 aaPredicted RBP18.26■□□□□ 0.51
NUP43-202ENST00000367402 SMARCA4P51532 1647 aa18.24■□□□□ 0.51
NUP43-202ENST00000367402 MROH2BQ7Z745 1585 aa18.18■□□□□ 0.5
NUP43-202ENST00000367402 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
NUP43-202ENST00000367402 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
NUP43-202ENST00000367402 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
NUP43-202ENST00000367402 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
NUP43-202ENST00000367402 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
NUP43-202ENST00000367402 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
NUP43-202ENST00000367402 HMGXB3Q12766 1538 aa18■□□□□ 0.47
NUP43-202ENST00000367402 WIZO95785 1651 aa17.97■□□□□ 0.47
NUP43-202ENST00000367402 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
NUP43-202ENST00000367402 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
NUP43-202ENST00000367402 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
NUP43-202ENST00000367402 DMRT2Q9Y5R5 561 aa17.75■□□□□ 0.43
NUP43-202ENST00000367402 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
NUP43-202ENST00000367402 NESP48681 1621 aa17.67■□□□□ 0.42
NUP43-202ENST00000367402 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
NUP43-202ENST00000367402 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
NUP43-202ENST00000367402 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
NUP43-202ENST00000367402 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
NUP43-202ENST00000367402 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
NUP43-202ENST00000367402 CFTRP13569 1480 aa17.53■□□□□ 0.4
NUP43-202ENST00000367402 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
NUP43-202ENST00000367402 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
NUP43-202ENST00000367402 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
NUP43-202ENST00000367402 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
NUP43-202ENST00000367402 CUX2O14529 1486 aa17.31■□□□□ 0.36
NUP43-202ENST00000367402 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
NUP43-202ENST00000367402 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
NUP43-202ENST00000367402 WDR62O43379 1518 aa17.23■□□□□ 0.35
NUP43-202ENST00000367402 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
NUP43-202ENST00000367402 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
NUP43-202ENST00000367402 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
NUP43-202ENST00000367402 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
NUP43-202ENST00000367402 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
NUP43-202ENST00000367402 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
NUP43-202ENST00000367402 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
NUP43-202ENST00000367402 CUX1P39880 1505 aa17.04■□□□□ 0.32
NUP43-202ENST00000367402 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
NUP43-202ENST00000367402 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.31
NUP43-202ENST00000367402 POLA1P09884 1462 aaPredicted RBP17■□□□□ 0.31
NUP43-202ENST00000367402 SOGA1O94964 1423 aa16.99■□□□□ 0.31
NUP43-202ENST00000367402 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
NUP43-202ENST00000367402 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
NUP43-202ENST00000367402 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
NUP43-202ENST00000367402 ZNF608Q9ULD9 1512 aaPredicted RBP16.93■□□□□ 0.3
NUP43-202ENST00000367402 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
NUP43-202ENST00000367402 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
NUP43-202ENST00000367402 TOP2BQ02880 1626 aa16.91■□□□□ 0.3
NUP43-202ENST00000367402 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
NUP43-202ENST00000367402 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.3
NUP43-202ENST00000367402 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
NUP43-202ENST00000367402 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
NUP43-202ENST00000367402 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
NUP43-202ENST00000367402 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
NUP43-202ENST00000367402 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
NUP43-202ENST00000367402 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
NUP43-202ENST00000367402 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
NUP43-202ENST00000367402 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
NUP43-202ENST00000367402 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
NUP43-202ENST00000367402 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
NUP43-202ENST00000367402 FBLN2P98095 1184 aa16.74■□□□□ 0.27
NUP43-202ENST00000367402 OSCARQ8IYS5 282 aa16.71■□□□□ 0.27
NUP43-202ENST00000367402 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
NUP43-202ENST00000367402 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
NUP43-202ENST00000367402 ABCA5Q8WWZ7 1642 aa16.69■□□□□ 0.26
NUP43-202ENST00000367402 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
NUP43-202ENST00000367402 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
NUP43-202ENST00000367402 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
NUP43-202ENST00000367402 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms