RNA–Protein interactions for RNA: ENST00000366695.3

HIST3H2A-201, Transcript of histone cluster 3 H2A, humanhuman

APPRIS P1 BASIC

Gene HIST3H2A, Length 895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2A-201ENST00000366695 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
HIST3H2A-201ENST00000366695 CCDC180Q9P1Z9 1646 aa32.32■■■□□ 2.76
HIST3H2A-201ENST00000366695 ABCC9O60706 1549 aa31.07■■■□□ 2.56
HIST3H2A-201ENST00000366695 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
HIST3H2A-201ENST00000366695 DCAF1Q9Y4B6 1507 aa30.3■■■□□ 2.44
HIST3H2A-201ENST00000366695 NACADO15069 1562 aa30.26■■■□□ 2.43
HIST3H2A-201ENST00000366695 MYO15BQ96JP2 1530 aa30.26■■■□□ 2.43
HIST3H2A-201ENST00000366695 DCAF8L2P0C7V8 631 aa30.24■■■□□ 2.43
HIST3H2A-201ENST00000366695 RB1CC1Q8TDY2 1594 aa30.16■■■□□ 2.42
HIST3H2A-201ENST00000366695 UNC13AQ9UPW8 1703 aa29.48■■■□□ 2.31
HIST3H2A-201ENST00000366695 SCRIBQ14160 1630 aa29.46■■■□□ 2.31
HIST3H2A-201ENST00000366695 BICRAQ9NZM4 1560 aa29.2■■■□□ 2.26
HIST3H2A-201ENST00000366695 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.25
HIST3H2A-201ENST00000366695 SHROOM4Q9ULL8 1493 aa29.07■■■□□ 2.24
HIST3H2A-201ENST00000366695 EIF4G1Q04637 1599 aaKnown RBP28.4■■■□□ 2.14
HIST3H2A-201ENST00000366695 CECR2Q9BXF3 1484 aa28.36■■■□□ 2.13
HIST3H2A-201ENST00000366695 BAZ1AQ9NRL2 1556 aaPredicted RBP28.3■■■□□ 2.12
HIST3H2A-201ENST00000366695 SMARCA4P51532 1647 aa28.25■■■□□ 2.11
HIST3H2A-201ENST00000366695 CC2D2AQ9P2K1 1620 aa28.16■■■□□ 2.1
HIST3H2A-201ENST00000366695 MROH2BQ7Z745 1585 aa28.14■■■□□ 2.1
HIST3H2A-201ENST00000366695 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
HIST3H2A-201ENST00000366695 PEG3Q9GZU2 1588 aa28■■■□□ 2.07
HIST3H2A-201ENST00000366695 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
HIST3H2A-201ENST00000366695 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
HIST3H2A-201ENST00000366695 ATAD2BQ9ULI0 1458 aa27.96■■■□□ 2.07
HIST3H2A-201ENST00000366695 NCAPD3P42695 1498 aa27.89■■■□□ 2.05
HIST3H2A-201ENST00000366695 WIZO95785 1651 aa27.87■■■□□ 2.05
HIST3H2A-201ENST00000366695 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
HIST3H2A-201ENST00000366695 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
HIST3H2A-201ENST00000366695 TOP2AP11388 1531 aaKnown RBP27.63■■■□□ 2.01
HIST3H2A-201ENST00000366695 SUPT5HO00267 1087 aaKnown RBP27.6■■■□□ 2.01
HIST3H2A-201ENST00000366695 CCDC88BA6NC98 1476 aa27.27■■□□□ 1.96
HIST3H2A-201ENST00000366695 LAMC3Q9Y6N6 1575 aa27.1■■□□□ 1.93
HIST3H2A-201ENST00000366695 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
HIST3H2A-201ENST00000366695 CFTRP13569 1480 aa27.04■■□□□ 1.92
HIST3H2A-201ENST00000366695 NESP48681 1621 aa27.01■■□□□ 1.92
HIST3H2A-201ENST00000366695 PRDM2Q13029 1718 aa26.94■■□□□ 1.9
HIST3H2A-201ENST00000366695 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
HIST3H2A-201ENST00000366695 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
HIST3H2A-201ENST00000366695 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
HIST3H2A-201ENST00000366695 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
HIST3H2A-201ENST00000366695 CEP164Q9UPV0 1460 aa26.71■■□□□ 1.87
HIST3H2A-201ENST00000366695 MRC2Q9UBG0 1479 aa26.57■■□□□ 1.84
HIST3H2A-201ENST00000366695 THOC2Q8NI27 1593 aaKnown RBP26.56■■□□□ 1.84
HIST3H2A-201ENST00000366695 ABCC8Q09428 1581 aa26.48■■□□□ 1.83
HIST3H2A-201ENST00000366695 WDR62O43379 1518 aa26.48■■□□□ 1.83
HIST3H2A-201ENST00000366695 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
HIST3H2A-201ENST00000366695 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
HIST3H2A-201ENST00000366695 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
HIST3H2A-201ENST00000366695 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.825e-6■■■■■ 29.2
HIST3H2A-201ENST00000366695 CUX1P39880 1505 aa26.38■■□□□ 1.81
HIST3H2A-201ENST00000366695 CUX2O14529 1486 aa26.35■■□□□ 1.81
HIST3H2A-201ENST00000366695 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
HIST3H2A-201ENST00000366695 TOP2BQ02880 1626 aa26.31■■□□□ 1.8
HIST3H2A-201ENST00000366695 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
HIST3H2A-201ENST00000366695 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
HIST3H2A-201ENST00000366695 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
HIST3H2A-201ENST00000366695 IFT140Q96RY7 1462 aa26.14■■□□□ 1.78
HIST3H2A-201ENST00000366695 SOGA1O94964 1423 aa26.11■■□□□ 1.77
HIST3H2A-201ENST00000366695 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
HIST3H2A-201ENST00000366695 TRIM41Q8WV44 630 aa26.08■■□□□ 1.77
HIST3H2A-201ENST00000366695 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
HIST3H2A-201ENST00000366695 RAD54L2Q9Y4B4 1467 aa26.06■■□□□ 1.76
HIST3H2A-201ENST00000366695 WDR97A6NE52 1622 aa26.01■■□□□ 1.75
HIST3H2A-201ENST00000366695 ABCA10Q8WWZ4 1543 aa26.01■■□□□ 1.75
HIST3H2A-201ENST00000366695 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
HIST3H2A-201ENST00000366695 EIF4G3O43432 1585 aaKnown RBP25.89■■□□□ 1.73
HIST3H2A-201ENST00000366695 TDRD9Q8NDG6 1382 aaKnown RBP25.87■■□□□ 1.73
HIST3H2A-201ENST00000366695 ABCA5Q8WWZ7 1642 aa25.87■■□□□ 1.73
HIST3H2A-201ENST00000366695 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
HIST3H2A-201ENST00000366695 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
HIST3H2A-201ENST00000366695 KIF27Q86VH2 1401 aa25.81■■□□□ 1.72
HIST3H2A-201ENST00000366695 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
HIST3H2A-201ENST00000366695 GRIN2BQ13224 1484 aa25.76■■□□□ 1.71
HIST3H2A-201ENST00000366695 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
HIST3H2A-201ENST00000366695 EEA1Q15075 1411 aa25.68■■□□□ 1.7
HIST3H2A-201ENST00000366695 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
HIST3H2A-201ENST00000366695 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
HIST3H2A-201ENST00000366695 SNAPC4Q5SXM2 1469 aa25.64■■□□□ 1.69
HIST3H2A-201ENST00000366695 IGF1RP08069 1367 aa25.63■■□□□ 1.69
HIST3H2A-201ENST00000366695 CUL7Q14999 1698 aa25.6■■□□□ 1.69
HIST3H2A-201ENST00000366695 ADAMTS12P58397 1594 aa25.58■■□□□ 1.69
HIST3H2A-201ENST00000366695 FHAD1B1AJZ9 1412 aa25.55■■□□□ 1.68
HIST3H2A-201ENST00000366695 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
HIST3H2A-201ENST00000366695 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.67
HIST3H2A-201ENST00000366695 CARMIL1Q5VZK9 1371 aa25.5■■□□□ 1.67
HIST3H2A-201ENST00000366695 CHD1O14646 1710 aa25.48■■□□□ 1.67
HIST3H2A-201ENST00000366695 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
HIST3H2A-201ENST00000366695 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
HIST3H2A-201ENST00000366695 PRXQ9BXM0 1461 aa25.44■■□□□ 1.66
HIST3H2A-201ENST00000366695 GRIN2AQ12879 1464 aa25.42■■□□□ 1.66
HIST3H2A-201ENST00000366695 FBLN2P98095 1184 aa25.42■■□□□ 1.66
HIST3H2A-201ENST00000366695 RAPGEF2Q9Y4G8 1499 aa25.41■■□□□ 1.66
HIST3H2A-201ENST00000366695 KIF21BO75037 1637 aa25.37■■□□□ 1.65
HIST3H2A-201ENST00000366695 NUP160Q12769 1436 aa25.3■■□□□ 1.64
HIST3H2A-201ENST00000366695 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
HIST3H2A-201ENST00000366695 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
HIST3H2A-201ENST00000366695 GOLGA3Q08378 1498 aa25.23■■□□□ 1.63
HIST3H2A-201ENST00000366695 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
HIST3H2A-201ENST00000366695 KIAA0586Q9BVV6 1533 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms