RNA–Protein interactions for RNA: ENST00000366683.3

ACTA1-201, Transcript of actin, alpha 1, skeletal muscle, humanhuman

TSL 5 BASIC

Gene ACTA1, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1-201ENST00000366683 NISCHQ9Y2I1 1504 aa38.81■■■■□ 3.8
ACTA1-201ENST00000366683 CCDC180Q9P1Z9 1646 aa34.69■■■■□ 3.14
ACTA1-201ENST00000366683 ABCC9O60706 1549 aa34.41■■■■□ 3.1
ACTA1-201ENST00000366683 RB1CC1Q8TDY2 1594 aa32.89■■■□□ 2.86
ACTA1-201ENST00000366683 NACADO15069 1562 aa32.74■■■□□ 2.83
ACTA1-201ENST00000366683 DCAF8L2P0C7V8 631 aa32.73■■■□□ 2.83
ACTA1-201ENST00000366683 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
ACTA1-201ENST00000366683 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
ACTA1-201ENST00000366683 UNC13AQ9UPW8 1703 aa32.17■■■□□ 2.74
ACTA1-201ENST00000366683 PABPN1Q86U42 306 aaKnown RBP eCLIP32.12■■■□□ 2.73
ACTA1-201ENST00000366683 DCAF1Q9Y4B6 1507 aa32.06■■■□□ 2.72
ACTA1-201ENST00000366683 DNAJC5BQ9UF47 199 aa32.03■■■□□ 2.72
ACTA1-201ENST00000366683 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
ACTA1-201ENST00000366683 SCRIBQ14160 1630 aa31.64■■■□□ 2.65
ACTA1-201ENST00000366683 SHROOM4Q9ULL8 1493 aa31.48■■■□□ 2.63
ACTA1-201ENST00000366683 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
ACTA1-201ENST00000366683 EIF4G1Q04637 1599 aaKnown RBP31.09■■■□□ 2.57
ACTA1-201ENST00000366683 CECR2Q9BXF3 1484 aa30.96■■■□□ 2.55
ACTA1-201ENST00000366683 NCAPD3P42695 1498 aa30.21■■■□□ 2.43
ACTA1-201ENST00000366683 SMARCA4P51532 1647 aa30.21■■■□□ 2.43
ACTA1-201ENST00000366683 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
ACTA1-201ENST00000366683 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
ACTA1-201ENST00000366683 SMARCA2P51531 1590 aa30.1■■■□□ 2.41
ACTA1-201ENST00000366683 HMGXB3Q12766 1538 aa30■■■□□ 2.39
ACTA1-201ENST00000366683 MROH2BQ7Z745 1585 aa29.91■■■□□ 2.38
ACTA1-201ENST00000366683 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
ACTA1-201ENST00000366683 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.38
ACTA1-201ENST00000366683 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
ACTA1-201ENST00000366683 NESP48681 1621 aa29.64■■■□□ 2.34
ACTA1-201ENST00000366683 WIZO95785 1651 aa29.59■■■□□ 2.33
ACTA1-201ENST00000366683 CUX2O14529 1486 aa29.52■■■□□ 2.32
ACTA1-201ENST00000366683 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
ACTA1-201ENST00000366683 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
ACTA1-201ENST00000366683 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
ACTA1-201ENST00000366683 PDS5BQ9NTI5 1447 aa29.32■■■□□ 2.28
ACTA1-201ENST00000366683 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
ACTA1-201ENST00000366683 THOC2Q8NI27 1593 aaKnown RBP29.26■■■□□ 2.27
ACTA1-201ENST00000366683 DNAJC5Q9H3Z4 198 aa29.21■■■□□ 2.27
ACTA1-201ENST00000366683 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.27
ACTA1-201ENST00000366683 CFTRP13569 1480 aa29.04■■■□□ 2.24
ACTA1-201ENST00000366683 MRC2Q9UBG0 1479 aa29.03■■■□□ 2.24
ACTA1-201ENST00000366683 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
ACTA1-201ENST00000366683 CEP164Q9UPV0 1460 aa28.97■■■□□ 2.23
ACTA1-201ENST00000366683 WDR62O43379 1518 aa28.94■■■□□ 2.22
ACTA1-201ENST00000366683 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
ACTA1-201ENST00000366683 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
ACTA1-201ENST00000366683 URB2Q14146 1524 aaKnown RBP28.71■■■□□ 2.19
ACTA1-201ENST00000366683 TOPBP1Q92547 1522 aa28.47■■■□□ 2.15
ACTA1-201ENST00000366683 ABCC8Q09428 1581 aa28.45■■■□□ 2.14
ACTA1-201ENST00000366683 SUPT5HO00267 1087 aaKnown RBP28.4■■■□□ 2.14
ACTA1-201ENST00000366683 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
ACTA1-201ENST00000366683 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
ACTA1-201ENST00000366683 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
ACTA1-201ENST00000366683 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
ACTA1-201ENST00000366683 POLA1P09884 1462 aaPredicted RBP28.19■■■□□ 2.1
ACTA1-201ENST00000366683 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
ACTA1-201ENST00000366683 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
ACTA1-201ENST00000366683 AQRO60306 1485 aaKnown RBP eCLIP28.12■■■□□ 2.09
ACTA1-201ENST00000366683 SOGA1O94964 1423 aa28.1■■■□□ 2.09
ACTA1-201ENST00000366683 RAD54L2Q9Y4B4 1467 aa28.09■■■□□ 2.09
ACTA1-201ENST00000366683 CUX1P39880 1505 aa28.08■■■□□ 2.08
ACTA1-201ENST00000366683 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
ACTA1-201ENST00000366683 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
ACTA1-201ENST00000366683 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
ACTA1-201ENST00000366683 CHD1O14646 1710 aa27.92■■■□□ 2.06
ACTA1-201ENST00000366683 FBLN2P98095 1184 aa27.92■■■□□ 2.06
ACTA1-201ENST00000366683 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
ACTA1-201ENST00000366683 RIMBP3CA6NJZ7 1639 aa27.84■■■□□ 2.05
ACTA1-201ENST00000366683 RIMBP3BA6NNM3 1639 aa27.84■■■□□ 2.05
ACTA1-201ENST00000366683 RIMBP3Q9UFD9 1639 aa27.84■■■□□ 2.05
ACTA1-201ENST00000366683 SNAPC4Q5SXM2 1469 aa27.82■■■□□ 2.04
ACTA1-201ENST00000366683 GRIN2BQ13224 1484 aa27.8■■■□□ 2.04
ACTA1-201ENST00000366683 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
ACTA1-201ENST00000366683 CHMP7Q8WUX9 453 aaPredicted RBP27.76■■■□□ 2.03
ACTA1-201ENST00000366683 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.03
ACTA1-201ENST00000366683 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
ACTA1-201ENST00000366683 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
ACTA1-201ENST00000366683 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
ACTA1-201ENST00000366683 TOP2BQ02880 1626 aa27.72■■■□□ 2.03
ACTA1-201ENST00000366683 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
ACTA1-201ENST00000366683 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
ACTA1-201ENST00000366683 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
ACTA1-201ENST00000366683 ABCA5Q8WWZ7 1642 aa27.67■■■□□ 2.02
ACTA1-201ENST00000366683 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
ACTA1-201ENST00000366683 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
ACTA1-201ENST00000366683 CLASP1Q7Z460 1538 aa27.57■■■□□ 2
ACTA1-201ENST00000366683 ARAP1Q96P48 1450 aa27.51■■□□□ 1.99
ACTA1-201ENST00000366683 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
ACTA1-201ENST00000366683 GRIN2AQ12879 1464 aa27.43■■□□□ 1.98
ACTA1-201ENST00000366683 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
ACTA1-201ENST00000366683 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
ACTA1-201ENST00000366683 NUP160Q12769 1436 aa27.32■■□□□ 1.96
ACTA1-201ENST00000366683 CEP170Q5SW79 1584 aa27.31■■□□□ 1.96
ACTA1-201ENST00000366683 TRHP20396 242 aaPredicted RBP27.21■■□□□ 1.95
ACTA1-201ENST00000366683 KIF27Q86VH2 1401 aa27.2■■□□□ 1.94
ACTA1-201ENST00000366683 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
ACTA1-201ENST00000366683 IGF1RP08069 1367 aa27.17■■□□□ 1.94
ACTA1-201ENST00000366683 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
ACTA1-201ENST00000366683 JPH4Q96JJ6 628 aa27.11■■□□□ 1.93
ACTA1-201ENST00000366683 CUL7Q14999 1698 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms